RNA–Protein interactions for RNA: ENST00000491311.1

CDK11A-219, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-219ENST00000491311 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 JAK2O60674 1132 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 CTDNEP1O95476 244 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 STAT2P52630 851 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 KIF23Q02241 960 aaPredicted RBP17.6■□□□□ 0.41
CDK11A-219ENST00000491311 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 SYDE2Q5VT97 1194 aa17.6■□□□□ 0.41
CDK11A-219ENST00000491311 A0A0G2JMZ2 1700 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 PTPDC1A2A3K4 754 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 MANSC4A6NHS7 340 aaPredicted RBP17.59■□□□□ 0.41
CDK11A-219ENST00000491311 GNAQP50148 359 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 IRX3P78415 501 aaPredicted RBP17.59■□□□□ 0.41
CDK11A-219ENST00000491311 CATSPERGQ6ZRH7 1159 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 HOMER1Q86YM7 354 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 ADGRF4Q8IZF3 695 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 FAM43AQ8N2R8 423 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 ATG4CQ96DT6 458 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 DDX11Q96FC9 970 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 PTPN18Q99952 460 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 SLF1Q9BQI6 1058 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 SLC26A6Q9BXS9 759 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 FEM1BQ9UK73 627 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 PRR12Q9ULL5 1215 aa17.59■□□□□ 0.41
CDK11A-219ENST00000491311 PDHXO00330 501 aa17.58■□□□□ 0.4
CDK11A-219ENST00000491311 CYTH3O43739 400 aa17.58■□□□□ 0.4
CDK11A-219ENST00000491311 HSP90AA1P07900 732 aaKnown RBP17.58■□□□□ 0.4
CDK11A-219ENST00000491311 HSPA6P17066 643 aa17.58■□□□□ 0.4
CDK11A-219ENST00000491311 FOSBP53539 338 aa17.58■□□□□ 0.4
CDK11A-219ENST00000491311 FUT2Q10981 343 aa17.58■□□□□ 0.4
CDK11A-219ENST00000491311 CUL4AQ13619 759 aa17.58■□□□□ 0.4
CDK11A-219ENST00000491311 NTRK3Q16288 839 aa17.58■□□□□ 0.4
CDK11A-219ENST00000491311 CPLX2Q6PUV4 134 aaKnown RBP17.58■□□□□ 0.4
CDK11A-219ENST00000491311 FAM160B2Q86V87 743 aa17.58■□□□□ 0.4
CDK11A-219ENST00000491311 NSUN7Q8NE18 718 aaKnown RBP17.58■□□□□ 0.4
CDK11A-219ENST00000491311 CHURC1Q8WUH1 139 aa17.58■□□□□ 0.4
CDK11A-219ENST00000491311 ASCC2Q9H1I8 757 aaPredicted RBP17.58■□□□□ 0.4
CDK11A-219ENST00000491311 SMCHD1A6NHR9 2005 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 WDR33Q9C0J8 1336 aaKnown RBP17.57■□□□□ 0.4
CDK11A-219ENST00000491311 IGF2BP3O00425 579 aaKnown RBP eCLIP17.57■□□□□ 0.4
CDK11A-219ENST00000491311 TAL1P17542 331 aaPredicted RBP17.57■□□□□ 0.4
CDK11A-219ENST00000491311 VEGFBP49765 207 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 PPP2R5BQ15173 497 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 CCDC174Q6PII3 467 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 BTNL9Q6UXG8 535 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 ANKRD23Q86SG2 305 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 PIGSQ96S52 555 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 LZTS2Q9BRK4 669 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 SPZ1Q9BXG8 430 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 JMJD4Q9H9V9 463 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 PPP1R9AQ9ULJ8 1098 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 THSD7BQ9C0I4 1608 aa17.57■□□□□ 0.4
CDK11A-219ENST00000491311 SPDYE16A6NNV3 312 aaPredicted RBP17.56■□□□□ 0.4
CDK11A-219ENST00000491311 PEX10O60683 326 aa17.56■□□□□ 0.4
CDK11A-219ENST00000491311 CDKL5O76039 1030 aa17.56■□□□□ 0.4
CDK11A-219ENST00000491311 CYP2C8P10632 490 aa17.56■□□□□ 0.4
CDK11A-219ENST00000491311 IFNAR1P17181 557 aa17.56■□□□□ 0.4
CDK11A-219ENST00000491311 OSBPP22059 807 aa17.56■□□□□ 0.4
CDK11A-219ENST00000491311 SSRP1Q08945 709 aaKnown RBP17.56■□□□□ 0.4
CDK11A-219ENST00000491311 SREBF2Q12772 1141 aa17.56■□□□□ 0.4
CDK11A-219ENST00000491311 NOGQ13253 232 aa17.56■□□□□ 0.4
CDK11A-219ENST00000491311 PABPC4Q13310 644 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDK11A-219ENST00000491311 CDC37Q16543 378 aaPredicted RBP17.56■□□□□ 0.4
CDK11A-219ENST00000491311 P2RX7Q99572 595 aaKnown RBP17.56■□□□□ 0.4
CDK11A-219ENST00000491311 RIOX1Q9H6W3 641 aa17.56■□□□□ 0.4
CDK11A-219ENST00000491311 V9GY48 417 aaPredicted RBP17.56■□□□□ 0.4
CDK11A-219ENST00000491311 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
CDK11A-219ENST00000491311 FMNL1O95466 1100 aaPredicted RBP17.55■□□□□ 0.4
CDK11A-219ENST00000491311 HOXA7P31268 230 aaPredicted RBP17.55■□□□□ 0.4
CDK11A-219ENST00000491311 DSG3P32926 999 aa17.55■□□□□ 0.4
CDK11A-219ENST00000491311 AKAP17AQ02040 695 aaKnown RBP17.55■□□□□ 0.4
CDK11A-219ENST00000491311 COG2Q14746 738 aa17.55■□□□□ 0.4
CDK11A-219ENST00000491311 IFNL1Q8IU54 200 aa17.55■□□□□ 0.4
CDK11A-219ENST00000491311 TRIM22Q8IYM9 498 aa17.55■□□□□ 0.4
CDK11A-219ENST00000491311 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
CDK11A-219ENST00000491311 RRP36Q96EU6 259 aaKnown RBP17.55■□□□□ 0.4
CDK11A-219ENST00000491311 PAGR1Q9BTK6 254 aa17.55■□□□□ 0.4
CDK11A-219ENST00000491311 ORC3Q9UBD5 711 aaPredicted RBP17.55■□□□□ 0.4
CDK11A-219ENST00000491311 SMC3Q9UQE7 1217 aa17.55■□□□□ 0.4
CDK11A-219ENST00000491311 CTDP1Q9Y5B0 961 aaPredicted RBP17.55■□□□□ 0.4
CDK11A-219ENST00000491311 RBBP6Q7Z6E9 1792 aaKnown RBP17.54■□□□□ 0.4
CDK11A-219ENST00000491311 PLA2G6O60733 806 aa17.54■□□□□ 0.4
CDK11A-219ENST00000491311 HERVK_113P62684 666 aa17.54■□□□□ 0.4
CDK11A-219ENST00000491311 QRICH1Q2TAL8 776 aa17.54■□□□□ 0.4
CDK11A-219ENST00000491311 CPXCR1Q8N123 301 aa17.54■□□□□ 0.4
CDK11A-219ENST00000491311 GPKOWQ92917 476 aaPredicted RBP eCLIP17.54■□□□□ 0.4
CDK11A-219ENST00000491311 AIFM3Q96NN9 605 aa17.54■□□□□ 0.4
CDK11A-219ENST00000491311 DAXXQ9UER7 740 aaPredicted RBP17.54■□□□□ 0.4
CDK11A-219ENST00000491311 SEC63Q9UGP8 760 aaKnown RBP17.54■□□□□ 0.4
CDK11A-219ENST00000491311 PNMA3Q9UL41 463 aa17.54■□□□□ 0.4
CDK11A-219ENST00000491311 VWA5AO00534 786 aa17.53■□□□□ 0.4
CDK11A-219ENST00000491311 PRPF3O43395 683 aaKnown RBP17.53■□□□□ 0.4
CDK11A-219ENST00000491311 GJB2P29033 226 aa17.53■□□□□ 0.4
CDK11A-219ENST00000491311 TAF1CQ15572 869 aaPredicted RBP17.53■□□□□ 0.4
CDK11A-219ENST00000491311 USH1GQ495M9 461 aa17.53■□□□□ 0.4
CDK11A-219ENST00000491311 SMARCC2Q8TAQ2 1214 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms