RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 RHOVQ96L33 236 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 SLC6A18Q96N87 628 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 ANTXR1Q9H6X2 564 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 GFOD1Q9NXC2 390 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 MINPP1Q9UNW1 487 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 YBX2Q9Y2T7 364 aaKnown RBP2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 IRAK3Q9Y616 596 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 TAF6LQ9Y6J9 622 aa2.86□□□□□ -1.95
SNRNP40-207ENST00000491106 SOGA1O94964 1423 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 TOP2AP11388 1531 aaKnown RBP2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 WTIPA6NIX2 430 aaPredicted RBP2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 DNAJA2O60884 412 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 UBOX5O94941 541 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 SRFP11831 508 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 PRKCAP17252 672 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 DLG4P78352 724 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 TEKQ02763 1124 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 SNW1Q13573 536 aaKnown RBP2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 AUHQ13825 339 aaKnown RBP2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 TCEAL1Q15170 157 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 TIGD5Q53EQ6 642 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 TCERG1LQ5VWI1 586 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 TDRD10Q5VZ19 366 aaKnown RBP2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 GALNT18Q6P9A2 607 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 NUP43Q8NFH3 380 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 BACH2Q9BYV9 841 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 ZNF552Q9H707 407 aaPredicted RBP2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 ADAMTS1Q9UHI8 967 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 SUGT1Q9Y2Z0 365 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 KCTD3Q9Y597 815 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 PRR36Q9H6K5 1346 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 SMARCA4P51532 1647 aa2.85□□□□□ -1.95
SNRNP40-207ENST00000491106 GOLGA3Q08378 1498 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 RUSC2Q8N2Y8 1516 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 SMARCA2P51531 1590 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 RBM47A0AV96 593 aaKnown RBP2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 ABLIM1O14639 778 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 SIGLEC6O43699 453 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 GREM1O60565 184 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 SASH1O94885 1247 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 IMPDH2P12268 514 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 NME1P15531 152 aaKnown RBP2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 ENDOUP21128 410 aaKnown RBP2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 CCNFP41002 786 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 CRKP46108 304 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 LINC00310P59036 64 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 TMEM62Q0P6H9 643 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 VMACQ2NL98 169 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 GNPTABQ3T906 1256 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 ZNF394Q53GI3 561 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 HLA-DQA1Q5Y7H0 255 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 BICRALQ6AI39 1079 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 LILRA6Q6PI73 481 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 ERMP1Q7Z2K6 904 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 IRF2BP1Q8IU81 584 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 SIAH1Q8IUQ4 282 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 TMEM151BQ8IW70 566 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 ZDHHC14Q8IZN3 488 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 REXO1Q8N1G1 1221 aaKnown RBP2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 LINC00116Q8NCU8 138 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 MAP6Q96JE9 813 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 NT5C1AQ9BXI3 368 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 MCOLN1Q9GZU1 580 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 CNNM2Q9H8M5 875 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 EHMT1Q9H9B1 1298 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 AP5S1Q9NUS5 200 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 TNFRSF10DQ9UBN6 386 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 FAN1Q9Y2M0 1017 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 GPR55Q9Y2T6 319 aaPredicted RBP2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 SF3B6Q9Y3B4 125 aaKnown RBP2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 PCDHGB7Q9Y5F8 929 aa2.84□□□□□ -1.95
SNRNP40-207ENST00000491106 CEP164Q9UPV0 1460 aa2.84□□□□□ -1.96
SNRNP40-207ENST00000491106 UNC13AQ9UPW8 1703 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 TEX51A0A1B0GUA7 166 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 PEX10O60683 326 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 ATE1O95260 518 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 TBC1D8O95759 1140 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 GSNP06396 782 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 CD3EP07766 207 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 INHBBP09529 407 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 ITGA4P13612 1032 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 VAV1P15498 845 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 PNLIPP16233 465 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 ZNF16P17020 682 aaPredicted RBP2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 GARTP22102 1010 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 GLDCP23378 1020 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 KIR2DL1P43626 348 aaPredicted RBP2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 KIR2DL2P43627 348 aaPredicted RBP2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 MFAP1P55081 439 aaKnown RBP2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 NCKAP1LP55160 1127 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 CTSWP56202 376 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 POU4F1Q01851 419 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 LAPTM5Q13571 262 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 NR0B2Q15466 257 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 BBS9Q3SYG4 887 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 CDCP2Q5VXM1 449 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 C9orf131Q5VYM1 1079 aa2.83□□□□□ -1.96
SNRNP40-207ENST00000491106 ERICH6BQ5W0A0 696 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms