RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 MST1RQ04912 1400 aa12.52□□□□□ -0.41
VPS72-205ENST00000491094 USP5P45974 858 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 CRKLP46109 303 aaKnown RBP12.51□□□□□ -0.41
VPS72-205ENST00000491094 EXOC4Q96A65 974 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 JAKMIP2Q96AA8 810 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 LACRTQ9GZZ8 138 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 FAM207AQ9NSI2 230 aaPredicted RBP12.51□□□□□ -0.41
VPS72-205ENST00000491094 USP17L3A6NCW0 530 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 USP17L4A6NCW7 530 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 ATP2C1P98194 919 aaPredicted RBP12.51□□□□□ -0.41
VPS72-205ENST00000491094 PDE4DQ08499 809 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 C3orf67Q6ZVT6 689 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 USP17L1Q7RTZ2 530 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 CERS3Q8IU89 383 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 TANGO6Q9C0B7 1094 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 SAP30BPQ9UHR5 308 aaKnown RBP12.51□□□□□ -0.41
VPS72-205ENST00000491094 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 PSMA7O14818 248 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 RAD21O60216 631 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 SLC7A5Q01650 507 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 C2orf54Q08AI8 447 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 SLC44A5Q8NCS7 719 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 GBP3Q9H0R5 595 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 BMP15O95972 392 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 ZNF658Q5TYW1 1059 aaPredicted RBP12.51□□□□□ -0.41
VPS72-205ENST00000491094 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 BLIDQ8IZY5 108 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
VPS72-205ENST00000491094 RASSF4Q9H2L5 321 aa12.51□□□□□ -0.41
VPS72-205ENST00000491094 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
VPS72-205ENST00000491094 RNF40O75150 1001 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 SSBP05455 408 aaKnown RBP eCLIP12.5□□□□□ -0.41
VPS72-205ENST00000491094 PBX1P40424 430 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 WHAMMP3Q1A5X7 153 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 DYMQ7RTS9 669 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 MB21D1Q8N884 522 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 ACBD3Q9H3P7 528 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 FAM205AQ6ZU69 1335 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 CAMTA1Q9Y6Y1 1673 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 MAP2K7O14733 419 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 IL6STP40189 918 aaPredicted RBP12.5□□□□□ -0.41
VPS72-205ENST00000491094 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 CELF1Q92879 486 aaKnown RBP12.5□□□□□ -0.41
VPS72-205ENST00000491094 TUBGCP2Q9BSJ2 902 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 SLC39A2Q9NP94 309 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
VPS72-205ENST00000491094 REXO2Q9Y3B8 237 aaKnown RBP12.5□□□□□ -0.41
VPS72-205ENST00000491094 PLEKP08567 350 aaPredicted RBP12.5□□□□□ -0.41
VPS72-205ENST00000491094 FUT2Q10981 343 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 GOLGA5Q8TBA6 731 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 NOC4LQ9BVI4 516 aaKnown RBP12.5□□□□□ -0.41
VPS72-205ENST00000491094 RMND1Q9NWS8 449 aa12.5□□□□□ -0.41
VPS72-205ENST00000491094 FCER1AP12319 257 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 MECOMQ03112 1051 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 ARID5AQ03989 594 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 PTPROQ16827 1216 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 DZIP1Q86YF9 867 aaKnown RBP12.49□□□□□ -0.41
VPS72-205ENST00000491094 CCDC42Q96M95 316 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 EHD2Q9NZN4 543 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 RCCD1A6NED2 376 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 NKRFO15226 690 aaKnown RBP eCLIP12.49□□□□□ -0.41
VPS72-205ENST00000491094 KRT86O43790 486 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 CCDC51Q96ER9 411 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 RIOK1Q9BRS2 568 aaKnown RBP12.49□□□□□ -0.41
VPS72-205ENST00000491094 CRNKL1Q9BZJ0 848 aaKnown RBP12.49□□□□□ -0.41
VPS72-205ENST00000491094 LIMA1Q9UHB6 759 aaKnown RBP12.49□□□□□ -0.41
VPS72-205ENST00000491094 TECP42680 631 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 SPA17Q15506 151 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 PDXDC2PQ6P474 469 aa12.49□□□□□ -0.41
VPS72-205ENST00000491094 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.49□□□□□ -0.41
VPS72-205ENST00000491094 H7C1D1 291 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 AKR1B10O60218 316 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 NPY5RQ15761 445 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 EZH2Q15910 746 aaKnown RBP12.48□□□□□ -0.41
VPS72-205ENST00000491094 C2CD5Q86YS7 1000 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 IRF2BP1Q8IU81 584 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 PNMA1Q8ND90 353 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 LRWD1Q9UFC0 647 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 CCNT1O60563 726 aaKnown RBP12.48□□□□□ -0.41
VPS72-205ENST00000491094 CALM1P0DP23 149 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 CALM2P0DP24 149 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 CALM3P0DP25 149 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 FAM84BQ96KN1 310 aaPredicted RBP12.48□□□□□ -0.41
VPS72-205ENST00000491094 EXOC1Q9NV70 894 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 MARCH6O60337 910 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 CYLC1P35663 651 aaPredicted RBP12.48□□□□□ -0.41
VPS72-205ENST00000491094 TXKP42681 527 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 E2F4Q16254 413 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 CCDC181Q5TID7 509 aa12.48□□□□□ -0.41
VPS72-205ENST00000491094 SND1Q7KZF4 910 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPS72-205ENST00000491094 ELOA2Q8IYF1 753 aaPredicted RBP12.48□□□□□ -0.41
VPS72-205ENST00000491094 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms