RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 GOPCQ9HD26 462 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 LCTP09848 1927 aa18.64■□□□□ 0.58
COL2A1-207ENST00000490609 RNF113AO15541 343 aaKnown RBP18.64■□□□□ 0.57
COL2A1-207ENST00000490609 ADCY6O43306 1168 aa18.64■□□□□ 0.57
COL2A1-207ENST00000490609 CCSAPQ6IQ19 270 aaPredicted RBP18.64■□□□□ 0.57
COL2A1-207ENST00000490609 APPBP2Q92624 585 aa18.64■□□□□ 0.57
COL2A1-207ENST00000490609 SEC62Q99442 399 aaKnown RBP18.64■□□□□ 0.57
COL2A1-207ENST00000490609 XPNPEP3Q9NQH7 507 aa18.64■□□□□ 0.57
COL2A1-207ENST00000490609 MUC3AQ02505 3323 aa18.64■□□□□ 0.57
COL2A1-207ENST00000490609 MYO9BQ13459 2157 aa18.64■□□□□ 0.57
COL2A1-207ENST00000490609 MINDY4BA8MYZ0 360 aa18.63■□□□□ 0.57
COL2A1-207ENST00000490609 GPAA1O43292 621 aa18.63■□□□□ 0.57
COL2A1-207ENST00000490609 PRDM1O75626 825 aa18.63■□□□□ 0.57
COL2A1-207ENST00000490609 MYCNP04198 464 aaPredicted RBP18.63■□□□□ 0.57
COL2A1-207ENST00000490609 MAMDC4Q6UXC1 1216 aa18.63■□□□□ 0.57
COL2A1-207ENST00000490609 AMOTL1Q8IY63 956 aa18.63■□□□□ 0.57
COL2A1-207ENST00000490609 OTUD7AQ8TE49 926 aaPredicted RBP18.63■□□□□ 0.57
COL2A1-207ENST00000490609 FAM161BQ96MY7 647 aa18.63■□□□□ 0.57
COL2A1-207ENST00000490609 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
COL2A1-207ENST00000490609 CHMP4BQ9H444 224 aaKnown RBP18.63■□□□□ 0.57
COL2A1-207ENST00000490609 A0A1W2PQ45 241 aaPredicted RBP18.62■□□□□ 0.57
COL2A1-207ENST00000490609 A0A1W2PQY0 241 aa18.62■□□□□ 0.57
COL2A1-207ENST00000490609 ATP2A1O14983 1001 aa18.62■□□□□ 0.57
COL2A1-207ENST00000490609 FOXP2O15409 715 aa18.62■□□□□ 0.57
COL2A1-207ENST00000490609 KCTD2Q14681 263 aa18.62■□□□□ 0.57
COL2A1-207ENST00000490609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.62■□□□□ 0.57
COL2A1-207ENST00000490609 KLHDC9Q8NEP7 349 aa18.62■□□□□ 0.57
COL2A1-207ENST00000490609 CEP95Q96GE4 821 aa18.62■□□□□ 0.57
COL2A1-207ENST00000490609 PRDM5Q9NQX1 630 aaPredicted RBP18.62■□□□□ 0.57
COL2A1-207ENST00000490609 CLIP2Q9UDT6 1046 aa18.62■□□□□ 0.57
COL2A1-207ENST00000490609 TACC3Q9Y6A5 838 aa18.62■□□□□ 0.57
COL2A1-207ENST00000490609 MYADML2A6NDP7 307 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 RAD21O60216 631 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 RARBP10826 455 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 SNRNP48Q6IEG0 339 aaKnown RBP18.61■□□□□ 0.57
COL2A1-207ENST00000490609 IFNL3Q8IZI9 196 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 PRPF38AQ8NAV1 312 aaKnown RBP18.61■□□□□ 0.57
COL2A1-207ENST00000490609 PI4K2BQ8TCG2 481 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 DDRGK1Q96HY6 314 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 TEX13BQ9BXU2 312 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 TTYH1Q9H313 450 aaPredicted RBP18.61■□□□□ 0.57
COL2A1-207ENST00000490609 SLC38A10Q9HBR0 1119 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
COL2A1-207ENST00000490609 PATL2C9JE40 543 aaKnown RBP18.6■□□□□ 0.57
COL2A1-207ENST00000490609 KIAA0355O15063 1070 aa18.6■□□□□ 0.57
COL2A1-207ENST00000490609 KATNBL1Q9H079 304 aa18.6■□□□□ 0.57
COL2A1-207ENST00000490609 SEMA6BQ9H3T3 888 aa18.6■□□□□ 0.57
COL2A1-207ENST00000490609 MKNK2Q9HBH9 465 aa18.6■□□□□ 0.57
COL2A1-207ENST00000490609 PRKAG2Q9UGJ0 569 aa18.6■□□□□ 0.57
COL2A1-207ENST00000490609 TTC28Q96AY4 2481 aa18.6■□□□□ 0.57
COL2A1-207ENST00000490609 TRANK1O15050 2925 aa18.59■□□□□ 0.57
COL2A1-207ENST00000490609 SYNGAP1Q96PV0 1343 aa18.59■□□□□ 0.57
COL2A1-207ENST00000490609 SYNRGQ9UMZ2 1314 aa18.59■□□□□ 0.57
COL2A1-207ENST00000490609 AKR1A1P14550 325 aa18.59■□□□□ 0.57
COL2A1-207ENST00000490609 FAAP100Q0VG06 881 aa18.59■□□□□ 0.57
COL2A1-207ENST00000490609 CDX2Q99626 313 aaPredicted RBP18.59■□□□□ 0.57
COL2A1-207ENST00000490609 RAVER2Q9HCJ3 691 aaKnown RBP18.59■□□□□ 0.57
COL2A1-207ENST00000490609 PLIN4Q96Q06 1357 aa18.58■□□□□ 0.57
COL2A1-207ENST00000490609 LRRC37A2A6NM11 1700 aa18.58■□□□□ 0.57
COL2A1-207ENST00000490609 SALL3Q9BXA9 1300 aa18.58■□□□□ 0.57
COL2A1-207ENST00000490609 CTAGE5O15320 804 aa18.58■□□□□ 0.56
COL2A1-207ENST00000490609 CLTBP09497 229 aa18.58■□□□□ 0.56
COL2A1-207ENST00000490609 COPB2P35606 906 aa18.58■□□□□ 0.56
COL2A1-207ENST00000490609 ACLYP53396 1101 aa18.58■□□□□ 0.56
COL2A1-207ENST00000490609 ANKRD33Q7Z3H0 272 aa18.58■□□□□ 0.56
COL2A1-207ENST00000490609 RNF180Q86T96 592 aa18.58■□□□□ 0.56
COL2A1-207ENST00000490609 CPXCR1Q8N123 301 aa18.58■□□□□ 0.56
COL2A1-207ENST00000490609 LRRC47Q8N1G4 583 aaKnown RBP18.58■□□□□ 0.56
COL2A1-207ENST00000490609 MSL3Q8N5Y2 521 aaKnown RBP18.58■□□□□ 0.56
COL2A1-207ENST00000490609 NEDD1Q8NHV4 660 aa18.58■□□□□ 0.56
COL2A1-207ENST00000490609 TSEN34Q9BSV6 310 aaKnown RBP18.58■□□□□ 0.56
COL2A1-207ENST00000490609 INCENPQ9NQS7 918 aa18.58■□□□□ 0.56
COL2A1-207ENST00000490609 ZNF536O15090 1300 aa18.57■□□□□ 0.56
COL2A1-207ENST00000490609 ZFYP08048 801 aaPredicted RBP18.57■□□□□ 0.56
COL2A1-207ENST00000490609 CDK7P50613 346 aa18.57■□□□□ 0.56
COL2A1-207ENST00000490609 KCNA10Q16322 511 aa18.57■□□□□ 0.56
COL2A1-207ENST00000490609 ZNF467Q7Z7K2 595 aaPredicted RBP18.57■□□□□ 0.56
COL2A1-207ENST00000490609 GMCL1P1Q8NEA9 526 aa18.57■□□□□ 0.56
COL2A1-207ENST00000490609 KIFC2Q96AC6 838 aa18.57■□□□□ 0.56
COL2A1-207ENST00000490609 ASTN1O14525 1302 aa18.56■□□□□ 0.56
COL2A1-207ENST00000490609 PQBP1O60828 265 aaKnown RBP18.56■□□□□ 0.56
COL2A1-207ENST00000490609 GNAT2P19087 354 aa18.56■□□□□ 0.56
COL2A1-207ENST00000490609 SMAD3P84022 425 aaKnown RBP18.56■□□□□ 0.56
COL2A1-207ENST00000490609 CNTN2Q02246 1040 aa18.56■□□□□ 0.56
COL2A1-207ENST00000490609 ACVR2BQ13705 512 aa18.56■□□□□ 0.56
COL2A1-207ENST00000490609 ZMYM1Q5SVZ6 1142 aa18.56■□□□□ 0.56
COL2A1-207ENST00000490609 ZNF444Q8N0Y2 327 aaPredicted RBP18.56■□□□□ 0.56
COL2A1-207ENST00000490609 TOX2Q96NM4 488 aa18.56■□□□□ 0.56
COL2A1-207ENST00000490609 COL25A1Q9BXS0 654 aaPredicted RBP18.56■□□□□ 0.56
COL2A1-207ENST00000490609 IL17RBQ9NRM6 502 aa18.56■□□□□ 0.56
COL2A1-207ENST00000490609 CNPY2Q9Y2B0 182 aa18.56■□□□□ 0.56
COL2A1-207ENST00000490609 GBF1Q92538 1859 aa18.56■□□□□ 0.56
COL2A1-207ENST00000490609 ZBED4O75132 1171 aa18.55■□□□□ 0.56
COL2A1-207ENST00000490609 DUSP11O75319 330 aaKnown RBP18.55■□□□□ 0.56
COL2A1-207ENST00000490609 TTLL1O95922 423 aa18.55■□□□□ 0.56
COL2A1-207ENST00000490609 TDO2P48775 406 aa18.55■□□□□ 0.56
COL2A1-207ENST00000490609 C16orf59Q7L2K0 433 aa18.55■□□□□ 0.56
COL2A1-207ENST00000490609 RASGRP2Q7LDG7 609 aa18.55■□□□□ 0.56
COL2A1-207ENST00000490609 DDX11Q96FC9 970 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms