RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 CNPY2Q9Y2B0 182 aa18.69■□□□□ 0.58
NUP58-213ENST00000490231 COL11A1P12107 1806 aaPredicted RBP18.69■□□□□ 0.58
NUP58-213ENST00000490231 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 DNAJC25-GNG10A0A024R161 153 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 POTEB2H3BUK9 544 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 ZBED4O75132 1171 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 PRDM1O75626 825 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 TTLL1O95922 423 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 MAMDC4Q6UXC1 1216 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 GMCL1P1Q8NEA9 526 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 PI4K2BQ8TCG2 481 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 DDX11Q96FC9 970 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 PRDM5Q9NQX1 630 aaPredicted RBP18.68■□□□□ 0.58
NUP58-213ENST00000490231 PDLIM7Q9NR12 457 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 FEM1BQ9UK73 627 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 RIPK3Q9Y572 518 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 DNAH12Q6ZR08 3092 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 SYNGAP1Q96PV0 1343 aa18.68■□□□□ 0.58
NUP58-213ENST00000490231 PGK1P00558 417 aa18.67■□□□□ 0.58
NUP58-213ENST00000490231 PDE4BQ07343 736 aa18.67■□□□□ 0.58
NUP58-213ENST00000490231 ZNF467Q7Z7K2 595 aaPredicted RBP18.67■□□□□ 0.58
NUP58-213ENST00000490231 SLC38A10Q9HBR0 1119 aa18.67■□□□□ 0.58
NUP58-213ENST00000490231 CTDP1Q9Y5B0 961 aaPredicted RBP18.67■□□□□ 0.58
NUP58-213ENST00000490231 PCDHB15Q9Y5E8 787 aa18.67■□□□□ 0.58
NUP58-213ENST00000490231 LTBP2Q14767 1821 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 ADAMTS4O75173 837 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 SLC3A2P08195 630 aaKnown RBP18.66■□□□□ 0.58
NUP58-213ENST00000490231 OAZ1P54368 228 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 CPXCR1Q8N123 301 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 NEDD1Q8NHV4 660 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 BADQ92934 168 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 KIFC2Q96AC6 838 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 SEC62Q99442 399 aaKnown RBP18.66■□□□□ 0.58
NUP58-213ENST00000490231 FBXO40Q9UH90 709 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 FAM184BQ9ULE4 1060 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 TACC3Q9Y6A5 838 aa18.66■□□□□ 0.58
NUP58-213ENST00000490231 TRIM43BA6NCK2 446 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 SNAI1O95863 264 aaPredicted RBP18.65■□□□□ 0.58
NUP58-213ENST00000490231 TSPY3P0CV98 308 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 TSPY8P0CW00 308 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 FDX1P10109 184 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 TLE2Q04725 743 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 ZMYM1Q5SVZ6 1142 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 SH3RF1Q7Z6J0 888 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 CHST13Q8NET6 341 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 TRIM43Q96BQ3 446 aaPredicted RBP18.65■□□□□ 0.58
NUP58-213ENST00000490231 TSEN34Q9BSV6 310 aaKnown RBP18.65■□□□□ 0.58
NUP58-213ENST00000490231 FSD1Q9BTV5 496 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 NAPBQ9H115 298 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 RAVER2Q9HCJ3 691 aaKnown RBP18.65■□□□□ 0.58
NUP58-213ENST00000490231 COL6A3P12111 3177 aa18.65■□□□□ 0.58
NUP58-213ENST00000490231 A0A1W2PQ45 241 aaPredicted RBP18.64■□□□□ 0.57
NUP58-213ENST00000490231 A0A1W2PQY0 241 aa18.64■□□□□ 0.57
NUP58-213ENST00000490231 BMP3P12645 472 aa18.64■□□□□ 0.57
NUP58-213ENST00000490231 MX1P20591 662 aa18.64■□□□□ 0.57
NUP58-213ENST00000490231 PPARAQ07869 468 aa18.64■□□□□ 0.57
NUP58-213ENST00000490231 SHHQ15465 462 aa18.64■□□□□ 0.57
NUP58-213ENST00000490231 SLFN13Q68D06 897 aa18.64■□□□□ 0.57
NUP58-213ENST00000490231 LRRC47Q8N1G4 583 aaKnown RBP18.64■□□□□ 0.57
NUP58-213ENST00000490231 OTUD7AQ8TE49 926 aaPredicted RBP18.64■□□□□ 0.57
NUP58-213ENST00000490231 MOXD2PA6NHM9 499 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 DLL1O00548 723 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 CLTBP09497 229 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 SLC4A3P48751 1232 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 TFAP4Q01664 338 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 PPP4R3BQ5MIZ7 849 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 C9orf50Q5SZB4 431 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 ANKRD35Q8N283 1001 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 KLHDC9Q8NEP7 349 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 LENG1Q96BZ8 264 aaPredicted RBP18.63■□□□□ 0.57
NUP58-213ENST00000490231 SYNRGQ9UMZ2 1314 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 PLXNA1Q9UIW2 1896 aa18.63■□□□□ 0.57
NUP58-213ENST00000490231 ZNFX1Q9P2E3 1918 aaKnown RBP18.62■□□□□ 0.57
NUP58-213ENST00000490231 DUSP11O75319 330 aaKnown RBP18.62■□□□□ 0.57
NUP58-213ENST00000490231 ACLYP53396 1101 aa18.62■□□□□ 0.57
NUP58-213ENST00000490231 ACVR2BQ13705 512 aa18.62■□□□□ 0.57
NUP58-213ENST00000490231 CCSAPQ6IQ19 270 aaPredicted RBP18.62■□□□□ 0.57
NUP58-213ENST00000490231 ANKRD33Q7Z3H0 272 aa18.62■□□□□ 0.57
NUP58-213ENST00000490231 NUP133Q8WUM0 1156 aa18.62■□□□□ 0.57
NUP58-213ENST00000490231 GMCL1Q96IK5 515 aa18.62■□□□□ 0.57
NUP58-213ENST00000490231 TOX2Q96NM4 488 aa18.62■□□□□ 0.57
NUP58-213ENST00000490231 GUCD1Q96NT3 240 aa18.62■□□□□ 0.57
NUP58-213ENST00000490231 ABHD16BQ9H3Z7 469 aa18.62■□□□□ 0.57
NUP58-213ENST00000490231 ZHX1Q9UKY1 873 aaPredicted RBP18.62■□□□□ 0.57
NUP58-213ENST00000490231 SALL3Q9BXA9 1300 aa18.62■□□□□ 0.57
NUP58-213ENST00000490231 TMEM232C9JQI7 657 aa18.61■□□□□ 0.57
NUP58-213ENST00000490231 KIAA0355O15063 1070 aa18.61■□□□□ 0.57
NUP58-213ENST00000490231 ITGB8P26012 769 aa18.61■□□□□ 0.57
NUP58-213ENST00000490231 CST5P28325 142 aaPredicted RBP18.61■□□□□ 0.57
NUP58-213ENST00000490231 STAT2P52630 851 aa18.61■□□□□ 0.57
NUP58-213ENST00000490231 ZNF697Q5TEC3 545 aa18.61■□□□□ 0.57
NUP58-213ENST00000490231 FAM160B2Q86V87 743 aa18.61■□□□□ 0.57
NUP58-213ENST00000490231 FGD4Q96M96 766 aa18.61■□□□□ 0.57
NUP58-213ENST00000490231 STARD7Q9NQZ5 370 aa18.61■□□□□ 0.57
NUP58-213ENST00000490231 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.61■□□□□ 0.57
NUP58-213ENST00000490231 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
NUP58-213ENST00000490231 FOXP2O15409 715 aa18.6■□□□□ 0.57
NUP58-213ENST00000490231 PLA2G6O60733 806 aa18.6■□□□□ 0.57
NUP58-213ENST00000490231 PQBP1O60828 265 aaKnown RBP18.6■□□□□ 0.57
NUP58-213ENST00000490231 SMAD3P84022 425 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms