RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TSEN34Q9BSV6 310 aaKnown RBP9.92□□□□□ -0.82
USP39-216ENST00000490193 C1orf115Q9H7X2 142 aa9.92□□□□□ -0.82
USP39-216ENST00000490193 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
USP39-216ENST00000490193 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.91□□□□□ -0.82
USP39-216ENST00000490193 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.91□□□□□ -0.82
USP39-216ENST00000490193 ZNF865P0CJ78 1059 aaPredicted RBP9.91□□□□□ -0.82
USP39-216ENST00000490193 AKR1A1P14550 325 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 RAG1P15918 1043 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 DNAJB2P25686 324 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 COPB2P35606 906 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 ICA1Q05084 483 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 FPGSQ05932 587 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 PLS1Q14651 629 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 TJAP1Q5JTD0 557 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 SLC9C2Q5TAH2 1124 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 MSL3Q8N5Y2 521 aaKnown RBP9.91□□□□□ -0.82
USP39-216ENST00000490193 SLC44A5Q8NCS7 719 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 SDR42E1Q8WUS8 393 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 CCDC17Q96LX7 622 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 MMP19Q99542 508 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 BOLA1Q9Y3E2 137 aa9.91□□□□□ -0.82
USP39-216ENST00000490193 ZNF532Q9HCE3 1301 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 MOXD2PA6NHM9 499 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 PGK1P00558 417 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 CYP2D6P10635 497 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 AKR1B1P15121 316 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 PLA2G5P39877 138 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 FAAP100Q0VG06 881 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 PDAP1Q13442 181 aaKnown RBP9.9□□□□□ -0.82
USP39-216ENST00000490193 GRIN2CQ14957 1233 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 CCSAPQ6IQ19 270 aaPredicted RBP9.9□□□□□ -0.82
USP39-216ENST00000490193 CEP85Q6P2H3 762 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 AACSQ86V21 672 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 CLEC10AQ8IUN9 316 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 SPICE1Q8N0Z3 855 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 LCORLQ8N3X6 602 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 USP38Q8NB14 1042 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 KLHDC9Q8NEP7 349 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 REPS2Q8NFH8 660 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 ATP8A2Q9NTI2 1148 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 TMEM39AQ9NV64 488 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 TBX21Q9UL17 535 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 ZNF214Q9UL59 606 aaPredicted RBP9.9□□□□□ -0.82
USP39-216ENST00000490193 PPP1R9AQ9ULJ8 1098 aa9.9□□□□□ -0.82
USP39-216ENST00000490193 SYNGAP1Q96PV0 1343 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 SYNRGQ9UMZ2 1314 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 DCDC2CA8MYV0 355 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 CCER2I3L3R5 266 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 VWA5AO00534 786 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 PQBP1O60828 265 aaKnown RBP9.89□□□□□ -0.83
USP39-216ENST00000490193 TIMP1P01033 207 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 PGK2P07205 417 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 RLBP1P12271 317 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 TAL1P17542 331 aaPredicted RBP9.89□□□□□ -0.83
USP39-216ENST00000490193 CST5P28325 142 aaPredicted RBP9.89□□□□□ -0.83
USP39-216ENST00000490193 STAT3P40763 770 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 ACLYP53396 1101 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 KCTD2Q14681 263 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 HSP90AB4PQ58FF6 505 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 C12orf60Q5U649 245 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 RASIP1Q5U651 963 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 MAMDC4Q6UXC1 1216 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 C16orf86Q6ZW13 317 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.89□□□□□ -0.83
USP39-216ENST00000490193 NUP133Q8WUM0 1156 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 DYNLL2Q96FJ2 89 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 ZNF576Q9H609 170 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 STARD7Q9NQZ5 370 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 FBXO28Q9NVF7 368 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 EXOC6BQ9Y2D4 811 aa9.89□□□□□ -0.83
USP39-216ENST00000490193 MCM3APO60318 1980 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 CHD7Q9P2D1 2997 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 ELP1O95163 1332 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 MROH7Q68CQ1 1323 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 ZBED9Q6R2W3 1325 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 GBF1Q92538 1859 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 DNAJC25-GNG10A0A024R161 153 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 TNFRSF10AO00220 468 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 EEF2P13639 858 aaKnown RBP9.88□□□□□ -0.83
USP39-216ENST00000490193 CDK8P49336 464 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 CDK7P50613 346 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 AKNAD1Q5T1N1 836 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 MFSD5Q6N075 450 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 ITPRIPQ8IWB1 547 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 FTSJ3Q8IY81 847 aaKnown RBP9.88□□□□□ -0.83
USP39-216ENST00000490193 RHPN1Q8TCX5 695 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 TIFAQ96CG3 184 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.88□□□□□ -0.838e-7■■■□□ 16.6
USP39-216ENST00000490193 ARMT1Q9H993 441 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 KANSL2Q9H9L4 492 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 CNPY2Q9Y2B0 182 aa9.88□□□□□ -0.83
USP39-216ENST00000490193 BDP1A6H8Y1 2624 aa9.87□□□□□ -0.83
USP39-216ENST00000490193 NCOR1O75376 2440 aa9.87□□□□□ -0.83
USP39-216ENST00000490193 GOLIM4O00461 696 aa9.87□□□□□ -0.83
USP39-216ENST00000490193 ATP2A1O14983 1001 aa9.87□□□□□ -0.83
USP39-216ENST00000490193 DUSP11O75319 330 aaKnown RBP9.87□□□□□ -0.83
USP39-216ENST00000490193 SNAI1O95863 264 aaPredicted RBP9.87□□□□□ -0.83
USP39-216ENST00000490193 ADD2P35612 726 aa9.87□□□□□ -0.83
USP39-216ENST00000490193 PPIGQ13427 754 aaKnown RBP eCLIP9.87□□□□□ -0.836e-8■□□□□ 9.7
USP39-216ENST00000490193 KCNA10Q16322 511 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms