RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ZNF792Q3KQV3 632 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 VPS53Q5VIR6 699 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 CCDC129Q6ZRS4 1044 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 CHD1LQ86WJ1 897 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 NCAPG2Q86XI2 1143 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 PLEKHM2Q8IWE5 1019 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 EXOC6Q8TAG9 804 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 MAML3Q96JK9 1138 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 SLF1Q9BQI6 1058 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 LNPKQ9C0E8 428 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 CWC22Q9HCG8 908 aaKnown RBP11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 IL17RBQ9NRM6 502 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 SLC5A4Q9NY91 659 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 RBM27Q9P2N5 1060 aaKnown RBP11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 NRBP1Q9UHY1 535 aa11.57□□□□□ -0.56
TMEM39A-210ENST00000490099 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 PLA2G6O60733 806 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 FGAP02671 866 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 OAZ1P54368 228 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 PLS1Q14651 629 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 MCMDC2Q4G0Z9 681 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 FAM47AQ5JRC9 791 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 STK11IPQ8N1F8 1099 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 GMCL1Q96IK5 515 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 FAM227BQ96M60 508 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 TEX13BQ9BXU2 312 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 SLC38A10Q9HBR0 1119 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 INCENPQ9NQS7 918 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 FEM1BQ9UK73 627 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 RIPK3Q9Y572 518 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 ALPK3Q96L96 1907 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 ZMYM6O95789 1325 aa11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 RANBP2P49792 3224 aaKnown RBP11.56□□□□□ -0.56
TMEM39A-210ENST00000490099 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 A0A0D9SFI3 127 aa11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 A0A1W2PPC1 479 aa11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 SEPT4O43236 478 aa11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 CENPBP07199 599 aaPredicted RBP11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 FDX1P10109 184 aa11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 BMP8BP34820 402 aa11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 MSL3Q8N5Y2 521 aaKnown RBP11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 MMP19Q99542 508 aa11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 GDF15Q99988 308 aa11.55□□□□□ -0.56
TMEM39A-210ENST00000490099 DNM1LO00429 736 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 TSPY3P0CV98 308 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 TSPY8P0CW00 308 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 HSPD1P10809 573 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 BMP3P12645 472 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 KCTD2Q14681 263 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 SLFN13Q68D06 897 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 MAMDC4Q6UXC1 1216 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 ZNF467Q7Z7K2 595 aaPredicted RBP11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 ZNF589Q86UQ0 364 aaPredicted RBP11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 TINF2Q9BSI4 451 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 TCP11L1Q9NUJ3 509 aa11.54□□□□□ -0.56
TMEM39A-210ENST00000490099 COL11A1P12107 1806 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 ZBED4O75132 1171 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 PGK2P07205 417 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 PCP11498 1178 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 SDSP20132 328 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 LRRC26Q2I0M4 334 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 PRAMEF19Q5SWL8 479 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 RCSD1Q6JBY9 416 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 LRRC47Q8N1G4 583 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 ARRDC4Q8NCT1 418 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 SMCHD1A6NHR9 2005 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 ZNF536O15090 1300 aa11.53□□□□□ -0.56
TMEM39A-210ENST00000490099 NMT2O60551 498 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 SNAI1O95863 264 aaPredicted RBP11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 ZNF865P0CJ78 1059 aaPredicted RBP11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 SNX17Q15036 470 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 C1orf53Q5VUE5 145 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 SNRNP48Q6IEG0 339 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 B4GALNT3Q6L9W6 998 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 C7orf61Q8IZ16 206 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 CHST13Q8NET6 341 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 CHURC1Q8WUH1 139 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 FGD4Q96M96 766 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 CCDC171Q6TFL3 1326 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 MYH4Q9Y623 1939 aa11.52□□□□□ -0.57
TMEM39A-210ENST00000490099 TSPY2A6NKD2 308 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 TMEM232C9JQI7 657 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 RAD21O60216 631 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 TAL1P17542 331 aaPredicted RBP11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 MCCP23508 829 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 CNGA1P29973 690 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 SLC1A4P43007 532 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 NT5C2P49902 561 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 BTNL9Q6UXG8 535 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 KIFC2Q96AC6 838 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 TTC14Q96N46 770 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 RAVER2Q9HCJ3 691 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 FBXO40Q9UH90 709 aa11.51□□□□□ -0.57
TMEM39A-210ENST00000490099 SUPT16HQ9Y5B9 1047 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms