RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 PFKFB2O60825 505 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 PLEKHA8P1O95397 391 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 OSBPP22059 807 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 DSG3P32926 999 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 KIF5BP33176 963 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 METAP2P50579 478 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLIC4-203ENST00000489758 IRX3P78415 501 aaPredicted RBP18.75■□□□□ 0.59
CLIC4-203ENST00000489758 RTN1Q16799 776 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 OTUD7BQ6GQQ9 843 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 TMTC3Q6ZXV5 915 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 NBPF11Q86T75 865 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 FAM160B2Q86V87 743 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 PNMA3Q9UL41 463 aa18.75■□□□□ 0.59
CLIC4-203ENST00000489758 ISY1Q9ULR0 285 aaKnown RBP18.75■□□□□ 0.59
CLIC4-203ENST00000489758 ADGRA2Q96PE1 1338 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 CYTH3O43739 400 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 HERVK_113P62684 666 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 FUT2Q10981 343 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 ST3GAL1Q11201 340 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 STK3Q13188 491 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 SYDE2Q5VT97 1194 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 LBX2Q6XYB7 198 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
CLIC4-203ENST00000489758 PRPF38AQ8NAV1 312 aaKnown RBP18.74■□□□□ 0.59
CLIC4-203ENST00000489758 CHURC1Q8WUH1 139 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 KIFC2Q96AC6 838 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 ATG4CQ96DT6 458 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 PARK7Q99497 189 aaKnown RBP18.74■□□□□ 0.59
CLIC4-203ENST00000489758 UBA5Q9GZZ9 404 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 NCOA5Q9HCD5 579 aaKnown RBP18.74■□□□□ 0.59
CLIC4-203ENST00000489758 PRDM10Q9NQV6 1147 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 RBM28Q9NW13 759 aaKnown RBP18.74■□□□□ 0.59
CLIC4-203ENST00000489758 WBP1LQ9NX94 342 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 HOXC10Q9NYD6 342 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 PRR12Q9ULL5 1215 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 PCNTO95613 3336 aa18.74■□□□□ 0.59
CLIC4-203ENST00000489758 ALDH1A1P00352 501 aa18.73■□□□□ 0.59
CLIC4-203ENST00000489758 ADD1P35611 737 aaKnown RBP18.73■□□□□ 0.59
CLIC4-203ENST00000489758 MCM2P49736 904 aa18.73■□□□□ 0.59
CLIC4-203ENST00000489758 CCT2P78371 535 aaKnown RBP18.73■□□□□ 0.59
CLIC4-203ENST00000489758 MAP2K1Q02750 393 aaPredicted RBP18.73■□□□□ 0.59
CLIC4-203ENST00000489758 SCRN1Q12765 414 aa18.73■□□□□ 0.59
CLIC4-203ENST00000489758 PPP2R5BQ15173 497 aa18.73■□□□□ 0.59
CLIC4-203ENST00000489758 LZTS2Q9BRK4 669 aa18.73■□□□□ 0.59
CLIC4-203ENST00000489758 SLKQ9H2G2 1235 aaPredicted RBP18.73■□□□□ 0.59
CLIC4-203ENST00000489758 RIOX1Q9H6W3 641 aa18.73■□□□□ 0.59
CLIC4-203ENST00000489758 VWA5AO00534 786 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 CA12O43570 354 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 SMARCA1P28370 1054 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 GNAQP50148 359 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 LBX1P52954 281 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 IKQ13123 557 aaPredicted RBP18.72■□□□□ 0.59
CLIC4-203ENST00000489758 CRHR2Q13324 411 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 TAF1CQ15572 869 aaPredicted RBP18.72■□□□□ 0.59
CLIC4-203ENST00000489758 NTRK3Q16288 839 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 ADGRF4Q8IZF3 695 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 CMTR1Q8N1G2 835 aaKnown RBP18.72■□□□□ 0.59
CLIC4-203ENST00000489758 NECAB1Q8N987 351 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 REPS2Q8NFH8 660 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 GTF3C6Q969F1 213 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 MTMR8Q96EF0 704 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 ZSCAN31Q96LW9 406 aaPredicted RBP18.72■□□□□ 0.59
CLIC4-203ENST00000489758 SPZ1Q9BXG8 430 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 CFHR5Q9BXR6 569 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 JMJD4Q9H9V9 463 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 RNF186Q9NXI6 227 aa18.72■□□□□ 0.59
CLIC4-203ENST00000489758 CCDC196A0A1B0GTZ2 297 aa18.71■□□□□ 0.59
CLIC4-203ENST00000489758 CNMDO75829 334 aa18.71■□□□□ 0.59
CLIC4-203ENST00000489758 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
CLIC4-203ENST00000489758 SNX21Q969T3 373 aa18.71■□□□□ 0.59
CLIC4-203ENST00000489758 RANBP17Q9H2T7 1088 aaKnown RBP18.71■□□□□ 0.59
CLIC4-203ENST00000489758 R3HDMLQ9H3Y0 253 aa18.71■□□□□ 0.59
CLIC4-203ENST00000489758 SLC38A10Q9HBR0 1119 aa18.71■□□□□ 0.59
CLIC4-203ENST00000489758 TXNRD2Q9NNW7 524 aa18.71■□□□□ 0.59
CLIC4-203ENST00000489758 RBPJLQ9UBG7 517 aa18.71■□□□□ 0.59
CLIC4-203ENST00000489758 PEX10O60683 326 aa18.7■□□□□ 0.58
CLIC4-203ENST00000489758 SNAP25P60880 206 aa18.7■□□□□ 0.58
CLIC4-203ENST00000489758 SMCR8Q8TEV9 937 aaPredicted RBP18.7■□□□□ 0.58
CLIC4-203ENST00000489758 TMX3Q96JJ7 454 aa18.7■□□□□ 0.58
CLIC4-203ENST00000489758 BEGAINQ9BUH8 593 aa18.7■□□□□ 0.58
CLIC4-203ENST00000489758 ZFYVE28Q9HCC9 887 aa18.7■□□□□ 0.58
CLIC4-203ENST00000489758 SH2B1Q9NRF2 756 aaPredicted RBP18.7■□□□□ 0.58
CLIC4-203ENST00000489758 BTBD7Q9P203 1132 aa18.7■□□□□ 0.58
CLIC4-203ENST00000489758 CNTNAP5Q8WYK1 1306 aa18.7■□□□□ 0.58
CLIC4-203ENST00000489758 RLFQ13129 1914 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 TLR2O60603 784 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 CTDNEP1O95476 244 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 FDX1P10109 184 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 GCLCP48506 637 aaPredicted RBP18.69■□□□□ 0.58
CLIC4-203ENST00000489758 TMEM132BQ14DG7 1078 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 MB21D1Q8N884 522 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 GTF3C2Q8WUA4 911 aaPredicted RBP18.69■□□□□ 0.58
CLIC4-203ENST00000489758 SAGE1Q9NXZ1 904 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 MORF4L1Q9UBU8 362 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 ZNF214Q9UL59 606 aaPredicted RBP18.69■□□□□ 0.58
CLIC4-203ENST00000489758 ZNF536O15090 1300 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 A0A0G2JMZ2 1700 aa18.69■□□□□ 0.58
CLIC4-203ENST00000489758 ATP2A1O14983 1001 aa18.68■□□□□ 0.58
CLIC4-203ENST00000489758 TRPA1O75762 1119 aa18.68■□□□□ 0.58
CLIC4-203ENST00000489758 TBC1D8O95759 1140 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms