RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 GNA11P29992 359 aa16.96■□□□□ 0.31
COL9A1-208ENST00000489611 E2F4Q16254 413 aa16.96■□□□□ 0.31
COL9A1-208ENST00000489611 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
COL9A1-208ENST00000489611 GTPBP4Q9BZE4 634 aaKnown RBP16.96■□□□□ 0.31
COL9A1-208ENST00000489611 STX8Q9UNK0 236 aa16.96■□□□□ 0.31
COL9A1-208ENST00000489611 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
COL9A1-208ENST00000489611 PPP4R3BQ5MIZ7 849 aa16.96■□□□□ 0.3
COL9A1-208ENST00000489611 DPP8Q6V1X1 898 aaPredicted RBP16.96■□□□□ 0.3
COL9A1-208ENST00000489611 USP17L3A6NCW0 530 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 USP17L4A6NCW7 530 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 GOLGA6L9A6NEM1 432 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 ARHGAP6O43182 974 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 GTPBP6O43824 516 aaPredicted RBP16.95■□□□□ 0.3
COL9A1-208ENST00000489611 PARP1P09874 1014 aaKnown RBP16.95■□□□□ 0.3
COL9A1-208ENST00000489611 MCM7P33993 719 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 RHBDL3P58872 404 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 USP17L1Q7RTZ2 530 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 KRT25Q7Z3Z0 450 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 CNKSR1Q969H4 720 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 AK8Q96MA6 479 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 ZMYND12Q9H0C1 365 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 CUEDC2Q9H467 287 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 MAGEF1Q9HAY2 307 aa16.95■□□□□ 0.3
COL9A1-208ENST00000489611 SNED1Q8TER0 1413 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 A0A087X0B3 334 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 KLRF2D3W0D1 207 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 ZSCAN12O43309 604 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 TBX2Q13207 712 aaPredicted RBP16.94■□□□□ 0.3
COL9A1-208ENST00000489611 GLIPR1L2Q4G1C9 344 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 E4F1Q66K89 784 aaPredicted RBP16.94■□□□□ 0.3
COL9A1-208ENST00000489611 DTHD1Q6ZMT9 781 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 STAG2Q8N3U4 1231 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
COL9A1-208ENST00000489611 TMX4Q9H1E5 349 aaPredicted RBP16.94■□□□□ 0.3
COL9A1-208ENST00000489611 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
COL9A1-208ENST00000489611 SYNRGQ9UMZ2 1314 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 ESYT2A0FGR8 921 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 STXBP3O00186 592 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 STX10O60499 249 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 RBM10P98175 930 aaKnown RBP16.94■□□□□ 0.3
COL9A1-208ENST00000489611 FMR1Q06787 632 aaKnown RBP eCLIP16.94■□□□□ 0.3
COL9A1-208ENST00000489611 SPAG1Q07617 926 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 CUL4BQ13620 913 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 GRIK5Q16478 980 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 FILIP1LQ4L180 1135 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 C4orf32Q8N8J7 132 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 MTFR1LQ9H019 292 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 C6orf50Q9HD87 102 aa16.94■□□□□ 0.3
COL9A1-208ENST00000489611 A0A1B0GTH6 734 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 AFMP43652 599 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 WWC2Q6AWC2 1192 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 PDXDC2PQ6P474 469 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 HEATR3Q7Z4Q2 680 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 GRAMD1CQ8IYS0 662 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 DPF2Q92785 391 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 SWAP70Q9UH65 585 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 SAP30BPQ9UHR5 308 aaKnown RBP16.93■□□□□ 0.3
COL9A1-208ENST00000489611 PCDHA6Q9UN73 950 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 PCDHA8Q9Y5H6 950 aa16.93■□□□□ 0.3
COL9A1-208ENST00000489611 BAZ2BQ9UIF8 2168 aaKnown RBP16.92■□□□□ 0.3
COL9A1-208ENST00000489611 DPEP1P16444 411 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 NR1I3Q14994 352 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 PPP1R13BQ96KQ4 1090 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 CCSER1Q9C0I3 900 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 USP27XA6NNY8 438 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 WNT7AO00755 349 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 CYTH3O43739 400 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 SOGA3Q5TF21 947 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 CDKAL1Q5VV42 579 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 ANKRD20A12PQ8NF67 263 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 C7orf43Q8WVR3 580 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 GPKOWQ92917 476 aaPredicted RBP eCLIP16.92■□□□□ 0.3
COL9A1-208ENST00000489611 NAA15Q9BXJ9 866 aaKnown RBP16.92■□□□□ 0.3
COL9A1-208ENST00000489611 ZC3H12CQ9C0D7 883 aaKnown RBP16.92■□□□□ 0.3
COL9A1-208ENST00000489611 RWDD2AQ9UIY3 292 aa16.92■□□□□ 0.3
COL9A1-208ENST00000489611 SLX4Q8IY92 1834 aa16.91■□□□□ 0.3
COL9A1-208ENST00000489611 MYH8P13535 1937 aa16.91■□□□□ 0.3
COL9A1-208ENST00000489611 KCNA3P22001 575 aa16.91■□□□□ 0.3
COL9A1-208ENST00000489611 POLD1P28340 1107 aa16.91■□□□□ 0.3
COL9A1-208ENST00000489611 DOK7Q18PE1 504 aa16.91■□□□□ 0.3
COL9A1-208ENST00000489611 ASPRV1Q53RT3 343 aa16.91■□□□□ 0.3
COL9A1-208ENST00000489611 ZNF658Q5TYW1 1059 aaPredicted RBP16.91■□□□□ 0.3
COL9A1-208ENST00000489611 SLC44A5Q8NCS7 719 aa16.91■□□□□ 0.3
COL9A1-208ENST00000489611 ANKRD7Q92527 254 aa16.91■□□□□ 0.3
COL9A1-208ENST00000489611 DISC1Q9NRI5 854 aa16.91■□□□□ 0.3
COL9A1-208ENST00000489611 TRMT1Q9NXH9 659 aaKnown RBP16.91■□□□□ 0.3
COL9A1-208ENST00000489611 PPP1R3GB7ZBB8 358 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 C21orf2O43822 256 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 PPP1R2P41236 205 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 STAT6P42226 847 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 NAPAP54920 295 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 KCNB1Q14721 858 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 NONOQ15233 471 aaKnown RBP eCLIP16.9■□□□□ 0.3
COL9A1-208ENST00000489611 SLC4A8Q2Y0W8 1093 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 NOM1Q5C9Z4 860 aaKnown RBP16.9■□□□□ 0.3
COL9A1-208ENST00000489611 INTS13Q9NVM9 706 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 DAGLAQ9Y4D2 1042 aa16.9■□□□□ 0.3
COL9A1-208ENST00000489611 GOLGB1Q14789 3259 aaKnown RBP16.9■□□□□ 0.3
COL9A1-208ENST00000489611 VEGFAP15692 232 aaPredicted RBP16.9■□□□□ 0.3
COL9A1-208ENST00000489611 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms