RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 REPS2Q8NFH8 660 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 SPATC1LQ9H0A9 340 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 EFCC1Q9HA90 598 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
HLA-F-229ENST00000489502 TNPO2O14787 897 aaKnown RBP16.85■□□□□ 0.29
HLA-F-229ENST00000489502 FMNL1O95466 1100 aaPredicted RBP16.85■□□□□ 0.29
HLA-F-229ENST00000489502 TAL1P17542 331 aaPredicted RBP16.85■□□□□ 0.29
HLA-F-229ENST00000489502 SYDE2Q5VT97 1194 aa16.85■□□□□ 0.29
HLA-F-229ENST00000489502 WDR78Q5VTH9 848 aa16.85■□□□□ 0.29
HLA-F-229ENST00000489502 ZNF654Q8IZM8 581 aa16.85■□□□□ 0.29
HLA-F-229ENST00000489502 MB21D1Q8N884 522 aa16.85■□□□□ 0.29
HLA-F-229ENST00000489502 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
HLA-F-229ENST00000489502 UPF3BQ9BZI7 483 aaKnown RBP16.85■□□□□ 0.29
HLA-F-229ENST00000489502 PRR12Q9ULL5 1215 aa16.85■□□□□ 0.29
HLA-F-229ENST00000489502 ADAMTS5Q9UNA0 930 aa16.85■□□□□ 0.29
HLA-F-229ENST00000489502 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
HLA-F-229ENST00000489502 PARP1P09874 1014 aaKnown RBP16.84■□□□□ 0.29
HLA-F-229ENST00000489502 RXRAP19793 462 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 RPS6KB1P23443 525 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 GRM4Q14833 912 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 ASPRV1Q53RT3 343 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 CATIPQ7Z7H3 387 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 CPXCR1Q8N123 301 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 STAG2Q8N3U4 1231 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 CHURC1Q8WUH1 139 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 MTA3Q9BTC8 594 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 SLC38A10Q9HBR0 1119 aa16.84■□□□□ 0.29
HLA-F-229ENST00000489502 RAVER2Q9HCJ3 691 aaKnown RBP16.84■□□□□ 0.29
HLA-F-229ENST00000489502 ZNF214Q9UL59 606 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-229ENST00000489502 CTDP1Q9Y5B0 961 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-229ENST00000489502 PLA2G6O60733 806 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 EIF5BO60841 1220 aaKnown RBP16.83■□□□□ 0.28
HLA-F-229ENST00000489502 ZBED4O75132 1171 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 DDAH1O94760 285 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 PSMA5P28066 241 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 SLC4A3P48751 1232 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 CCNA1P78396 465 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 FGD1P98174 961 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 PRKCZQ05513 592 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 TROAPQ12815 778 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 GPATCH4Q5T3I0 446 aaKnown RBP16.83■□□□□ 0.28
HLA-F-229ENST00000489502 SNRNP48Q6IEG0 339 aaKnown RBP16.83■□□□□ 0.28
HLA-F-229ENST00000489502 CCDC174Q6PII3 467 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 BTNL9Q6UXG8 535 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 Q6ZUG5 572 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 MICU3Q86XE3 530 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 CCAR1Q8IX12 1150 aaKnown RBP16.83■□□□□ 0.28
HLA-F-229ENST00000489502 UBA5Q9GZZ9 404 aa16.83■□□□□ 0.28
HLA-F-229ENST00000489502 CWC22Q9HCG8 908 aaKnown RBP16.83■□□□□ 0.28
HLA-F-229ENST00000489502 BAZ2BQ9UIF8 2168 aaKnown RBP16.82■□□□□ 0.28
HLA-F-229ENST00000489502 ERCC3P19447 782 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 LIFRP42702 1097 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 GPR142Q7Z601 462 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 SGMS1Q86VZ5 419 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 NCAPG2Q86XI2 1143 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 CCDC144CPQ8IYA2 1237 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 TEX13BQ9BXU2 312 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 MCOLN1Q9GZU1 580 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 ZSWIM6Q9HCJ5 1215 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 GABRQQ9UN88 632 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 MYH6P13533 1939 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 ZNF236Q9UL36 1845 aa16.82■□□□□ 0.28
HLA-F-229ENST00000489502 SMCHD1A6NHR9 2005 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 ZNF536O15090 1300 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 KLF18A0A0U1RQI7 1052 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 DHX16O60231 1041 aaKnown RBP16.81■□□□□ 0.28
HLA-F-229ENST00000489502 MAPK4P31152 587 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 STAT3P40763 770 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 ANAPC15P60006 121 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 SLC35G1Q2M3R5 365 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 APOA5Q6Q788 366 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 RIOX2Q8IUF8 465 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 BRF1Q92994 677 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 COA7Q96BR5 231 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
HLA-F-229ENST00000489502 HOMER2Q9NSB8 354 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 SRRDQ9UH36 339 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 BRPF3Q9ULD4 1205 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 NAP1L2Q9ULW6 460 aaPredicted RBP16.81■□□□□ 0.28
HLA-F-229ENST00000489502 SLC12A7Q9Y666 1083 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 CYP46A1Q9Y6A2 500 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 PTCH2Q9Y6C5 1203 aa16.81■□□□□ 0.28
HLA-F-229ENST00000489502 PALM3A6NDB9 673 aaPredicted RBP16.8■□□□□ 0.28
HLA-F-229ENST00000489502 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
HLA-F-229ENST00000489502 ARHGEF6Q15052 776 aa16.8■□□□□ 0.28
HLA-F-229ENST00000489502 PLEKHH3Q7Z736 793 aa16.8■□□□□ 0.28
HLA-F-229ENST00000489502 SHCBP1Q8NEM2 672 aa16.8■□□□□ 0.28
HLA-F-229ENST00000489502 AGBL1Q96MI9 1066 aa16.8■□□□□ 0.28
HLA-F-229ENST00000489502 TM6SF1Q9BZW5 370 aa16.8■□□□□ 0.28
HLA-F-229ENST00000489502 RIPK3Q9Y572 518 aa16.8■□□□□ 0.28
HLA-F-229ENST00000489502 GOLGA8BA8MQT2 603 aa16.79■□□□□ 0.28
HLA-F-229ENST00000489502 KLRF2D3W0D1 207 aa16.79■□□□□ 0.28
HLA-F-229ENST00000489502 ATP2A1O14983 1001 aa16.79■□□□□ 0.28
HLA-F-229ENST00000489502 PLEKHA8P1O95397 391 aa16.79■□□□□ 0.28
HLA-F-229ENST00000489502 FLT3LGP49771 235 aa16.79■□□□□ 0.28
HLA-F-229ENST00000489502 CDC37Q16543 378 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms