RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 DLL1O00548 723 aa15.95■□□□□ 0.14
LINC00173-204ENST00000489452 ZNF865P0CJ78 1059 aaPredicted RBP15.95■□□□□ 0.14
LINC00173-204ENST00000489452 COPB2P35606 906 aa15.95■□□□□ 0.14
LINC00173-204ENST00000489452 LRRC47Q8N1G4 583 aaKnown RBP15.95■□□□□ 0.14
LINC00173-204ENST00000489452 BADQ92934 168 aa15.95■□□□□ 0.14
LINC00173-204ENST00000489452 FSD1Q9BTV5 496 aa15.95■□□□□ 0.14
LINC00173-204ENST00000489452 NACAP1Q9BZK3 213 aa15.95■□□□□ 0.14
LINC00173-204ENST00000489452 ZNF287Q9HBT7 754 aa15.95■□□□□ 0.14
LINC00173-204ENST00000489452 NRBP1Q9UHY1 535 aa15.95■□□□□ 0.14
LINC00173-204ENST00000489452 DIS3Q9Y2L1 958 aaKnown RBP15.95■□□□□ 0.14
LINC00173-204ENST00000489452 A0A0G2JMZ2 1700 aa15.94■□□□□ 0.14
LINC00173-204ENST00000489452 COL11A1P12107 1806 aaPredicted RBP15.94■□□□□ 0.14
LINC00173-204ENST00000489452 IGKV6D-41A0A0C4DH26 115 aa15.94■□□□□ 0.14
LINC00173-204ENST00000489452 TRIM43BA6NCK2 446 aa15.94■□□□□ 0.14
LINC00173-204ENST00000489452 SHHQ15465 462 aa15.94■□□□□ 0.14
LINC00173-204ENST00000489452 LRRFIP1Q32MZ4 808 aaKnown RBP15.94■□□□□ 0.14
LINC00173-204ENST00000489452 RNF180Q86T96 592 aa15.94■□□□□ 0.14
LINC00173-204ENST00000489452 MKL1Q969V6 931 aa15.94■□□□□ 0.14
LINC00173-204ENST00000489452 TRIM43Q96BQ3 446 aaPredicted RBP15.94■□□□□ 0.14
LINC00173-204ENST00000489452 MTMR4Q9NYA4 1195 aa15.94■□□□□ 0.14
LINC00173-204ENST00000489452 ZNF236Q9UL36 1845 aa15.94■□□□□ 0.14
LINC00173-204ENST00000489452 ERC2O15083 957 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 SNAI1O95863 264 aaPredicted RBP15.93■□□□□ 0.14
LINC00173-204ENST00000489452 TTLL1O95922 423 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 TSPY3P0CV98 308 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 TSPY8P0CW00 308 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 TFAP4Q01664 338 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 C9orf50Q5SZB4 431 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 SLFN13Q68D06 897 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 ANKRD35Q8N283 1001 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 INCENPQ9NQS7 918 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 PDLIM7Q9NR12 457 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 FEM1BQ9UK73 627 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 ZHX1Q9UKY1 873 aaPredicted RBP15.93■□□□□ 0.14
LINC00173-204ENST00000489452 PHF24Q9UPV7 400 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 STXBP5LQ9Y2K9 1186 aa15.93■□□□□ 0.14
LINC00173-204ENST00000489452 ROBO3Q96MS0 1386 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 POTEB2H3BUK9 544 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 PQBP1O60828 265 aaKnown RBP15.92■□□□□ 0.14
LINC00173-204ENST00000489452 AKR1A1P14550 325 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 PDE4BQ07343 736 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 SNX17Q15036 470 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 CCDC129Q6ZRS4 1044 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 NEDD1Q8NHV4 660 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 PI4K2BQ8TCG2 481 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 NAPBQ9H115 298 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 HOMER2Q9NSB8 354 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 FAM184BQ9ULE4 1060 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 TTC41PQ6P2S7 1318 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 UNC80Q8N2C7 3258 aa15.92■□□□□ 0.14
LINC00173-204ENST00000489452 A0A1W2PQ45 241 aaPredicted RBP15.91■□□□□ 0.14
LINC00173-204ENST00000489452 A0A1W2PQY0 241 aa15.91■□□□□ 0.14
LINC00173-204ENST00000489452 TMEM232C9JQI7 657 aa15.91■□□□□ 0.14
LINC00173-204ENST00000489452 SLC3A2P08195 630 aaKnown RBP15.91■□□□□ 0.14
LINC00173-204ENST00000489452 BMP3P12645 472 aa15.91■□□□□ 0.14
LINC00173-204ENST00000489452 IRX5P78411 483 aaPredicted RBP15.91■□□□□ 0.14
LINC00173-204ENST00000489452 PPARAQ07869 468 aa15.91■□□□□ 0.14
LINC00173-204ENST00000489452 IKQ13123 557 aaPredicted RBP15.91■□□□□ 0.14
LINC00173-204ENST00000489452 ZMYM1Q5SVZ6 1142 aa15.91■□□□□ 0.14
LINC00173-204ENST00000489452 SLC38A10Q9HBR0 1119 aa15.91■□□□□ 0.14
LINC00173-204ENST00000489452 MTMR7Q9Y216 660 aa15.91■□□□□ 0.14
LINC00173-204ENST00000489452 TACC3Q9Y6A5 838 aa15.91■□□□□ 0.14
LINC00173-204ENST00000489452 PARP14Q460N5 1801 aa15.91■□□□□ 0.14
LINC00173-204ENST00000489452 DNAJC25-GNG10A0A024R161 153 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 MCCP23508 829 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 ITGB8P26012 769 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 SNAP25P60880 206 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 CTDSPL2Q05D32 466 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 ACVR2BQ13705 512 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 KCNA10Q16322 511 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 ANKRD45Q5TZF3 282 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 VTI1AQ96AJ9 217 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 TMEM39AQ9NV64 488 aa15.9■□□□□ 0.14
LINC00173-204ENST00000489452 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
LINC00173-204ENST00000489452 ATP2A1O14983 1001 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 ADAMTS4O75173 837 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 CLTBP09497 229 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 RAG1P15918 1043 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 MX1P20591 662 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 ACLYP53396 1101 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 CNTN2Q02246 1040 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 C1orf53Q5VUE5 145 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
LINC00173-204ENST00000489452 GMCL1P1Q8NEA9 526 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 AGBL1Q96MI9 1066 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.89■□□□□ 0.13
LINC00173-204ENST00000489452 STX8Q9UNK0 236 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 SYNGAP1Q96PV0 1343 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 SYNRGQ9UMZ2 1314 aa15.89■□□□□ 0.13
LINC00173-204ENST00000489452 MYADML2A6NDP7 307 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 NMT2O60551 498 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 C6orf222P0C671 652 aaPredicted RBP15.88■□□□□ 0.13
LINC00173-204ENST00000489452 SLC1A4P43007 532 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 CCDC144BQ3MJ40 725 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 ZNF697Q5TEC3 545 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 FAM109BQ6ICB4 259 aaPredicted RBP15.88■□□□□ 0.13
LINC00173-204ENST00000489452 KCTD1Q719H9 257 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 CHST13Q8NET6 341 aa15.88■□□□□ 0.13
LINC00173-204ENST00000489452 CHURC1Q8WUH1 139 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms