RNA–Protein interactions for RNA: ENST00000489390.1

SHOC2-205, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 5

Gene SHOC2, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-205ENST00000489390 MICALL1Q8N3F8 863 aa17.26■□□□□ 0.35
SHOC2-205ENST00000489390 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
SHOC2-205ENST00000489390 STAT3P40763 770 aa17.25■□□□□ 0.35
SHOC2-205ENST00000489390 PPP2R2DQ66LE6 453 aa17.25■□□□□ 0.35
SHOC2-205ENST00000489390 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
SHOC2-205ENST00000489390 MAMDC4Q6UXC1 1216 aa17.25■□□□□ 0.35
SHOC2-205ENST00000489390 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
SHOC2-205ENST00000489390 VTI1AQ96AJ9 217 aa17.25■□□□□ 0.35
SHOC2-205ENST00000489390 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
SHOC2-205ENST00000489390 TRANK1O15050 2925 aa17.25■□□□□ 0.35
SHOC2-205ENST00000489390 MCM3APO60318 1980 aa17.24■□□□□ 0.35
SHOC2-205ENST00000489390 PRRC2BQ5JSZ5 2229 aaKnown RBP17.24■□□□□ 0.35
SHOC2-205ENST00000489390 GPR37L1O60883 481 aa17.24■□□□□ 0.35
SHOC2-205ENST00000489390 SNAI1O95863 264 aaPredicted RBP17.24■□□□□ 0.35
SHOC2-205ENST00000489390 CD4P01730 458 aa17.24■□□□□ 0.35
SHOC2-205ENST00000489390 C6orf222P0C671 652 aaPredicted RBP17.24■□□□□ 0.35
SHOC2-205ENST00000489390 POU3F3P20264 500 aaPredicted RBP17.24■□□□□ 0.35
SHOC2-205ENST00000489390 CYP2C18P33260 490 aa17.24■□□□□ 0.35
SHOC2-205ENST00000489390 SIAH1Q8IUQ4 282 aa17.24■□□□□ 0.35
SHOC2-205ENST00000489390 UPF3AQ9H1J1 476 aaKnown RBP17.24■□□□□ 0.35
SHOC2-205ENST00000489390 SPC25Q9HBM1 224 aa17.24■□□□□ 0.35
SHOC2-205ENST00000489390 ZHX1Q9UKY1 873 aaPredicted RBP17.24■□□□□ 0.35
SHOC2-205ENST00000489390 PCDHA11Q9Y5I1 949 aa17.24■□□□□ 0.35
SHOC2-205ENST00000489390 MUC6Q6W4X9 2439 aa17.23■□□□□ 0.35
SHOC2-205ENST00000489390 VWA5AO00534 786 aa17.23■□□□□ 0.35
SHOC2-205ENST00000489390 ICA1Q05084 483 aa17.23■□□□□ 0.35
SHOC2-205ENST00000489390 SKIV2LQ15477 1246 aaKnown RBP17.23■□□□□ 0.35
SHOC2-205ENST00000489390 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
SHOC2-205ENST00000489390 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
SHOC2-205ENST00000489390 DBNLQ9UJU6 430 aaKnown RBP17.23■□□□□ 0.35
SHOC2-205ENST00000489390 ZNF214Q9UL59 606 aaPredicted RBP17.23■□□□□ 0.35
SHOC2-205ENST00000489390 COG5Q9UP83 839 aa17.23■□□□□ 0.35
SHOC2-205ENST00000489390 GJA9P57773 515 aa17.22■□□□□ 0.35
SHOC2-205ENST00000489390 IRX5P78411 483 aaPredicted RBP17.22■□□□□ 0.35
SHOC2-205ENST00000489390 EVX2Q03828 476 aa17.22■□□□□ 0.35
SHOC2-205ENST00000489390 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
SHOC2-205ENST00000489390 OTOP2Q7RTS6 562 aa17.22■□□□□ 0.35
SHOC2-205ENST00000489390 TRMT2AQ8IZ69 625 aaKnown RBP17.22■□□□□ 0.35
SHOC2-205ENST00000489390 CRNKL1Q9BZJ0 848 aaKnown RBP17.22■□□□□ 0.35
SHOC2-205ENST00000489390 PPP1R9AQ9ULJ8 1098 aa17.22■□□□□ 0.35
SHOC2-205ENST00000489390 MAGEB6P1A0A0J9YX57 407 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 GTPBP6O43824 516 aaPredicted RBP17.21■□□□□ 0.35
SHOC2-205ENST00000489390 TLL1O43897 1013 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 RABGGTBP53611 331 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 POLA2Q14181 598 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 GNASQ5JWF2 1037 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 ZNF467Q7Z7K2 595 aaPredicted RBP17.21■□□□□ 0.35
SHOC2-205ENST00000489390 CLEC10AQ8IUN9 316 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 REPS2Q8NFH8 660 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 HIPK3Q9H422 1215 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 C11orf16Q9NQ32 467 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 FBXO28Q9NVF7 368 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 MTCH2Q9Y6C9 303 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 SLC4A7Q9Y6M7 1214 aa17.21■□□□□ 0.35
SHOC2-205ENST00000489390 DNAJC25-GNG10A0A024R161 153 aa17.2■□□□□ 0.34
SHOC2-205ENST00000489390 ADCY6O43306 1168 aa17.2■□□□□ 0.34
SHOC2-205ENST00000489390 NKX3-2P78367 333 aa17.2■□□□□ 0.34
SHOC2-205ENST00000489390 ACVR2BQ13705 512 aa17.2■□□□□ 0.34
SHOC2-205ENST00000489390 SLC43A3Q8NBI5 491 aa17.2■□□□□ 0.34
SHOC2-205ENST00000489390 DDX11Q96FC9 970 aa17.2■□□□□ 0.34
SHOC2-205ENST00000489390 ABHD16BQ9H3Z7 469 aa17.2■□□□□ 0.34
SHOC2-205ENST00000489390 ANTXR1Q9H6X2 564 aa17.2■□□□□ 0.34
SHOC2-205ENST00000489390 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
SHOC2-205ENST00000489390 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
SHOC2-205ENST00000489390 AKR1B1P15121 316 aa17.19■□□□□ 0.34
SHOC2-205ENST00000489390 MYOGP15173 224 aa17.19■□□□□ 0.34
SHOC2-205ENST00000489390 CCDC144BQ3MJ40 725 aa17.19■□□□□ 0.34
SHOC2-205ENST00000489390 ALYREFQ86V81 257 aaKnown RBP17.19■□□□□ 0.34
SHOC2-205ENST00000489390 RPUSD2Q8IZ73 545 aaKnown RBP17.19■□□□□ 0.34
SHOC2-205ENST00000489390 SSH3Q8TE77 659 aa17.19■□□□□ 0.34
SHOC2-205ENST00000489390 CCDC17Q96LX7 622 aa17.19■□□□□ 0.34
SHOC2-205ENST00000489390 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.19■□□□□ 0.34
SHOC2-205ENST00000489390 UMODL1Q5DID0 1318 aa17.19■□□□□ 0.34
SHOC2-205ENST00000489390 BAZ2AQ9UIF9 1905 aaKnown RBP17.18■□□□□ 0.34
SHOC2-205ENST00000489390 CTAGE5O15320 804 aa17.18■□□□□ 0.34
SHOC2-205ENST00000489390 SURF6O75683 361 aaKnown RBP17.18■□□□□ 0.34
SHOC2-205ENST00000489390 TEX13BQ9BXU2 312 aa17.18■□□□□ 0.34
SHOC2-205ENST00000489390 SEZ6LQ9BYH1 1024 aa17.18■□□□□ 0.34
SHOC2-205ENST00000489390 CCDC8Q9H0W5 538 aaPredicted RBP17.18■□□□□ 0.34
SHOC2-205ENST00000489390 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
SHOC2-205ENST00000489390 CABYRO75952 493 aa17.17■□□□□ 0.34
SHOC2-205ENST00000489390 CYP2D6P10635 497 aa17.17■□□□□ 0.34
SHOC2-205ENST00000489390 ATP2A2P16615 1042 aaKnown RBP17.17■□□□□ 0.34
SHOC2-205ENST00000489390 RARSP54136 660 aaKnown RBP17.17■□□□□ 0.34
SHOC2-205ENST00000489390 EAF2Q96CJ1 260 aaPredicted RBP17.17■□□□□ 0.34
SHOC2-205ENST00000489390 DYNLL2Q96FJ2 89 aa17.17■□□□□ 0.34
SHOC2-205ENST00000489390 NOC4LQ9BVI4 516 aaKnown RBP17.17■□□□□ 0.34
SHOC2-205ENST00000489390 GOPCQ9HD26 462 aa17.17■□□□□ 0.34
SHOC2-205ENST00000489390 EEF2P13639 858 aaKnown RBP17.16■□□□□ 0.34
SHOC2-205ENST00000489390 CCL23P55773 120 aa17.16■□□□□ 0.34
SHOC2-205ENST00000489390 TMEM67Q5HYA8 995 aa17.16■□□□□ 0.34
SHOC2-205ENST00000489390 SNRNP48Q6IEG0 339 aaKnown RBP17.16■□□□□ 0.34
SHOC2-205ENST00000489390 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.16■□□□□ 0.34
SHOC2-205ENST00000489390 SDR42E1Q8WUS8 393 aa17.16■□□□□ 0.34
SHOC2-205ENST00000489390 KHSRPQ92945 711 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■□□□ 12.6
SHOC2-205ENST00000489390 HLA-CQ95604 372 aa17.16■□□□□ 0.34
SHOC2-205ENST00000489390 WNT8AQ9H1J5 351 aa17.16■□□□□ 0.34
SHOC2-205ENST00000489390 KANSL2Q9H9L4 492 aa17.16■□□□□ 0.34
SHOC2-205ENST00000489390 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
SHOC2-205ENST00000489390 FAM86C2PA6NEL3 165 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms