RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 TAL1P17542 331 aaPredicted RBP11.32□□□□□ -0.6
SSBP1-212ENST00000489378 CCDC184Q52MB2 194 aa11.32□□□□□ -0.6
SSBP1-212ENST00000489378 CCDC174Q6PII3 467 aa11.32□□□□□ -0.6
SSBP1-212ENST00000489378 HERVK_113Q902F9 699 aa11.32□□□□□ -0.6
SSBP1-212ENST00000489378 KIAA1683Q9H0B3 1180 aa11.32□□□□□ -0.6
SSBP1-212ENST00000489378 RPAP3Q9H6T3 665 aaPredicted RBP11.32□□□□□ -0.6
SSBP1-212ENST00000489378 STARD7Q9NQZ5 370 aa11.32□□□□□ -0.6
SSBP1-212ENST00000489378 AATFQ9NY61 560 aaKnown RBP eCLIP11.32□□□□□ -0.6
SSBP1-212ENST00000489378 FOCADQ5VW36 1801 aa11.31□□□□□ -0.6
SSBP1-212ENST00000489378 ACLYP53396 1101 aa11.31□□□□□ -0.6
SSBP1-212ENST00000489378 RABGGTBP53611 331 aa11.31□□□□□ -0.6
SSBP1-212ENST00000489378 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
SSBP1-212ENST00000489378 PSRC1Q6PGN9 363 aaPredicted RBP11.31□□□□□ -0.6
SSBP1-212ENST00000489378 SPATA5Q8NB90 893 aa11.31□□□□□ -0.6
SSBP1-212ENST00000489378 PPP1R12CQ9BZL4 782 aa11.31□□□□□ -0.6
SSBP1-212ENST00000489378 SPATC1LQ9H0A9 340 aa11.31□□□□□ -0.6
SSBP1-212ENST00000489378 A0A1B0GUL7 405 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 ADAMTS4O75173 837 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 MYOGP15173 224 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 USP14P54578 494 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 MVPQ14764 893 aaKnown RBP11.3□□□□□ -0.6
SSBP1-212ENST00000489378 RAB3GAP1Q15042 981 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 ADGRA1Q86SQ6 560 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 TMEM199Q8N511 208 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 MRPL50Q8N5N7 158 aaKnown RBP11.3□□□□□ -0.6
SSBP1-212ENST00000489378 SHCBP1Q8NEM2 672 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 CD320Q9NPF0 282 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 SLC5A4Q9NY91 659 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.3□□□□□ -0.6
SSBP1-212ENST00000489378 A0A0G2JMZ2 1700 aa11.3□□□□□ -0.6
SSBP1-212ENST00000489378 APBB1O00213 710 aa11.29□□□□□ -0.6
SSBP1-212ENST00000489378 RFXAPO00287 272 aa11.29□□□□□ -0.6
SSBP1-212ENST00000489378 PPP2R2DQ66LE6 453 aa11.29□□□□□ -0.6
SSBP1-212ENST00000489378 THSD4Q6ZMP0 1018 aa11.29□□□□□ -0.6
SSBP1-212ENST00000489378 NOL10Q9BSC4 688 aaKnown RBP11.29□□□□□ -0.6
SSBP1-212ENST00000489378 TSEN34Q9BSV6 310 aaKnown RBP11.29□□□□□ -0.6
SSBP1-212ENST00000489378 NRBP1Q9UHY1 535 aa11.29□□□□□ -0.6
SSBP1-212ENST00000489378 MTCH2Q9Y6C9 303 aa11.29□□□□□ -0.6
SSBP1-212ENST00000489378 ZNF521Q96K83 1311 aa11.29□□□□□ -0.6
SSBP1-212ENST00000489378 CACNA1AO00555 2505 aa11.29□□□□□ -0.6
SSBP1-212ENST00000489378 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 MYADML2A6NDP7 307 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 PI4K2BG5E9Z4 385 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 ZNF865P0CJ78 1059 aaPredicted RBP11.28□□□□□ -0.6
SSBP1-212ENST00000489378 CYP2C18P33260 490 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 CDK7P50613 346 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 PPP4CP60510 307 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 TFCP2Q12800 502 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 PLS1Q14651 629 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 COG2Q14746 738 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 KRT40Q6A162 431 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 CCSAPQ6IQ19 270 aaPredicted RBP11.28□□□□□ -0.6
SSBP1-212ENST00000489378 TATDN1Q6P1N9 297 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 NCAPG2Q86XI2 1143 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 ABRAQ8N0Z2 381 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 NUP133Q8WUM0 1156 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 IL23AQ9NPF7 189 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 LRP2BPQ9P2M1 347 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 WDFY4Q6ZS81 3184 aa11.28□□□□□ -0.6
SSBP1-212ENST00000489378 BAG3O95817 575 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 HLA-DOAP06340 250 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 PGK2P07205 417 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 AKR1A1P14550 325 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 GUCY1A2P33402 732 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 PTPN5P54829 565 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 NHLH1Q02575 133 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 KCNA10Q16322 511 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 NAA16Q6N069 864 aaPredicted RBP11.27□□□□□ -0.6
SSBP1-212ENST00000489378 OTOP2Q7RTS6 562 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 KLHDC9Q8NEP7 349 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 NEUROD6Q96NK8 337 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 TINF2Q9BSI4 451 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 MROH8Q9H579 483 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 COPRSQ9NQ92 184 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 HOXC10Q9NYD6 342 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 COG5Q9UP83 839 aa11.27□□□□□ -0.6
SSBP1-212ENST00000489378 MYH1P12882 1939 aa11.27□□□□□ -0.61
SSBP1-212ENST00000489378 PTPRCP08575 1304 aa11.27□□□□□ -0.61
SSBP1-212ENST00000489378 MOXD2PA6NHM9 499 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 EPOPA6NHQ4 379 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 FGBP02675 491 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 FCER1AP12319 257 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 POU3F3P20264 500 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-212ENST00000489378 ARID4AP29374 1257 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-212ENST00000489378 MCAMP43121 646 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 ABCB5Q2M3G0 1257 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 ATF7IPQ6VMQ6 1270 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 TANGO6Q9C0B7 1094 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 MROH7Q68CQ1 1323 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 A0A1W2PRG0 241 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 PRR33A8MZF0 331 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 PPP1R3GB7ZBB8 358 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 UBTFL1P0CB47 393 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-212ENST00000489378 DYNLL1P63167 89 aaKnown RBP11.26□□□□□ -0.61
SSBP1-212ENST00000489378 ZNF792Q3KQV3 632 aa11.26□□□□□ -0.61
SSBP1-212ENST00000489378 CERKLQ49MI3 558 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-212ENST00000489378 KIAA1755Q5JYT7 1200 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms