RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 SMCO2A6NFE2 343 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 ENTPD3O75355 529 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 ZNF543Q08ER8 600 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 SH3BP5LQ7L8J4 393 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 KRT25Q7Z3Z0 450 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 DEFB132Q7Z7B7 95 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 DRC7Q8IY82 874 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 LRRC47Q8N1G4 583 aaKnown RBP16.58■□□□□ 0.25
NINJ1-204ENST00000489274 PDILTQ8N807 584 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 RASGRP4Q8TDF6 673 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 MKL1Q969V6 931 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 VPS33BQ9H267 617 aa16.58■□□□□ 0.25
NINJ1-204ENST00000489274 DDTLA6NHG4 134 aaPredicted RBP16.58■□□□□ 0.24
NINJ1-204ENST00000489274 LAD1O00515 517 aa16.58■□□□□ 0.24
NINJ1-204ENST00000489274 KCNA3P22001 575 aa16.58■□□□□ 0.24
NINJ1-204ENST00000489274 LONP1P36776 959 aaKnown RBP16.58■□□□□ 0.24
NINJ1-204ENST00000489274 CACNB3P54284 484 aa16.58■□□□□ 0.24
NINJ1-204ENST00000489274 IL17AQ16552 155 aa16.58■□□□□ 0.24
NINJ1-204ENST00000489274 GPATCH4Q5T3I0 446 aaKnown RBP16.58■□□□□ 0.24
NINJ1-204ENST00000489274 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
NINJ1-204ENST00000489274 SMARCE1Q969G3 411 aa16.58■□□□□ 0.24
NINJ1-204ENST00000489274 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
NINJ1-204ENST00000489274 MAN1B1Q9UKM7 699 aa16.58■□□□□ 0.24
NINJ1-204ENST00000489274 A0A087X0B3 334 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 OFD1O75665 1012 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 TCP10Q12799 353 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 MORC3Q14149 939 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 CFAP100Q494V2 611 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 ISM2Q6H9L7 571 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 DHX58Q96C10 678 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 FRMPD2Q68DX3 1309 aaPredicted RBP16.57■□□□□ 0.24
NINJ1-204ENST00000489274 GREB1LQ9C091 1923 aaPredicted RBP16.57■□□□□ 0.24
NINJ1-204ENST00000489274 MPHOSPH10O00566 681 aaKnown RBP16.57■□□□□ 0.24
NINJ1-204ENST00000489274 MYO1BO43795 1136 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 SMC2O95347 1197 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 PRR29P0C7W0 189 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 BMP6P22004 513 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 EIF6P56537 245 aaKnown RBP16.57■□□□□ 0.24
NINJ1-204ENST00000489274 CERKLQ49MI3 558 aaPredicted RBP16.57■□□□□ 0.24
NINJ1-204ENST00000489274 CCDC186Q7Z3E2 898 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 MLKLQ8NB16 471 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 PAGE5Q96GU1 130 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 KCNF1Q9H3M0 494 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 KANSL2Q9H9L4 492 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
NINJ1-204ENST00000489274 ATRNL1Q5VV63 1379 aa16.56■□□□□ 0.24
NINJ1-204ENST00000489274 COL2A1P02458 1487 aaPredicted RBP16.56■□□□□ 0.24
NINJ1-204ENST00000489274 DPEP1P16444 411 aa16.56■□□□□ 0.24
NINJ1-204ENST00000489274 MYL5Q02045 173 aa16.56■□□□□ 0.24
NINJ1-204ENST00000489274 INF2Q27J81 1249 aa16.56■□□□□ 0.24
NINJ1-204ENST00000489274 CT47A1Q5JQC4 288 aaPredicted RBP16.56■□□□□ 0.24
NINJ1-204ENST00000489274 RSBN1LQ6PCB5 846 aaPredicted RBP16.56■□□□□ 0.24
NINJ1-204ENST00000489274 CLEC10AQ8IUN9 316 aa16.56■□□□□ 0.24
NINJ1-204ENST00000489274 IQUBQ8NA54 791 aa16.56■□□□□ 0.24
NINJ1-204ENST00000489274 DACH1Q9UI36 760 aa16.56■□□□□ 0.24
NINJ1-204ENST00000489274 PNMA6FA0A0J9YX94 578 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 VIL1P09327 827 aaKnown RBP16.55■□□□□ 0.24
NINJ1-204ENST00000489274 PTGS1P23219 599 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 PRPHP41219 470 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 ORC2Q13416 577 aaPredicted RBP16.55■□□□□ 0.24
NINJ1-204ENST00000489274 NONOQ15233 471 aaKnown RBP eCLIP16.55■□□□□ 0.24
NINJ1-204ENST00000489274 E2F4Q16254 413 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 PPP1R18Q6NYC8 613 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 ZSCAN29Q8IWY8 852 aaPredicted RBP16.55■□□□□ 0.24
NINJ1-204ENST00000489274 PRMT6Q96LA8 375 aaPredicted RBP16.55■□□□□ 0.24
NINJ1-204ENST00000489274 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
NINJ1-204ENST00000489274 JMJD4Q9H9V9 463 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 GPCPD1Q9NPB8 672 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 DTHD1Q6ZMT9 781 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 MTMR8Q96EF0 704 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 GMLQ99445 158 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 NRBP1Q9UHY1 535 aa16.55■□□□□ 0.24
NINJ1-204ENST00000489274 GRAMD1CQ8IYS0 662 aa16.54■□□□□ 0.24
NINJ1-204ENST00000489274 ADGRF4Q8IZF3 695 aa16.54■□□□□ 0.24
NINJ1-204ENST00000489274 KIAA1524Q8TCG1 905 aa16.54■□□□□ 0.24
NINJ1-204ENST00000489274 HSD3B7Q9H2F3 369 aa16.54■□□□□ 0.24
NINJ1-204ENST00000489274 MYH8P13535 1937 aa16.54■□□□□ 0.24
NINJ1-204ENST00000489274 SLURP2P0DP57 97 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 DPYDQ12882 1025 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.53■□□□□ 0.24
NINJ1-204ENST00000489274 TMEM179Q6ZVK1 233 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 REXO1Q8N1G1 1221 aaKnown RBP16.53■□□□□ 0.24
NINJ1-204ENST00000489274 LARGE2Q8N3Y3 721 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 DCAF4Q8WV16 495 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 GSDMAQ96QA5 445 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 SIPA1L1O43166 1804 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
NINJ1-204ENST00000489274 TXLNAP40222 546 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 ATP2B2Q01814 1243 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 PDXDC2PQ6P474 469 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 NEK8Q86SG6 692 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 TMEM60Q9H2L4 133 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 SPTLC3Q9NUV7 552 aa16.53■□□□□ 0.24
NINJ1-204ENST00000489274 SPDYE2BA6NHP3 402 aa16.52■□□□□ 0.24
NINJ1-204ENST00000489274 NEMFO60524 1076 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms