RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 EGR3Q06889 387 aa6.22□□□□□ -1.41
CBWD1-216ENST00000489272 PHACTR4Q8IZ21 702 aa6.22□□□□□ -1.41
CBWD1-216ENST00000489272 SYTL4Q96C24 671 aaPredicted RBP6.22□□□□□ -1.41
CBWD1-216ENST00000489272 CCDC74BQ96LY2 380 aa6.22□□□□□ -1.41
CBWD1-216ENST00000489272 ASPNQ9BXN1 380 aa6.22□□□□□ -1.41
CBWD1-216ENST00000489272 MINDY4BA8MYZ0 360 aa6.21□□□□□ -1.42
CBWD1-216ENST00000489272 ZNF20P17024 532 aa6.21□□□□□ -1.42
CBWD1-216ENST00000489272 CHMP4BP1P59074 171 aa6.21□□□□□ -1.42
CBWD1-216ENST00000489272 MLECQ14165 292 aa6.21□□□□□ -1.42
CBWD1-216ENST00000489272 REC114Q7Z4M0 266 aa6.21□□□□□ -1.42
CBWD1-216ENST00000489272 SHISA4Q96DD7 197 aa6.21□□□□□ -1.42
CBWD1-216ENST00000489272 KREMEN1Q96MU8 473 aa6.21□□□□□ -1.42
CBWD1-216ENST00000489272 CHURC1-FNTBB4DL54 471 aa6.2□□□□□ -1.42
CBWD1-216ENST00000489272 CWF19L2Q2TBE0 894 aaKnown RBP6.2□□□□□ -1.42
CBWD1-216ENST00000489272 FAM196AQ6ZSG2 479 aa6.2□□□□□ -1.42
CBWD1-216ENST00000489272 FERMT3Q86UX7 667 aa6.2□□□□□ -1.42
CBWD1-216ENST00000489272 FBXO27Q8NI29 283 aa6.2□□□□□ -1.42
CBWD1-216ENST00000489272 KBTBD4Q9NVX7 518 aa6.2□□□□□ -1.42
CBWD1-216ENST00000489272 GPR160Q9UJ42 338 aa6.2□□□□□ -1.42
CBWD1-216ENST00000489272 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
CBWD1-216ENST00000489272 LRRN2O75325 713 aa6.19□□□□□ -1.42
CBWD1-216ENST00000489272 ITGB3P05106 788 aa6.19□□□□□ -1.42
CBWD1-216ENST00000489272 SLURP1P55000 103 aa6.19□□□□□ -1.42
CBWD1-216ENST00000489272 CRIP3Q6Q6R5 217 aa6.19□□□□□ -1.42
CBWD1-216ENST00000489272 ERMP1Q7Z2K6 904 aa6.19□□□□□ -1.42
CBWD1-216ENST00000489272 DHX38Q92620 1227 aaKnown RBP6.19□□□□□ -1.42
CBWD1-216ENST00000489272 PWWP2AQ96N64 755 aa6.19□□□□□ -1.42
CBWD1-216ENST00000489272 GZF1Q9H116 711 aaPredicted RBP6.19□□□□□ -1.42
CBWD1-216ENST00000489272 BCL11AQ9H165 835 aa6.19□□□□□ -1.42
CBWD1-216ENST00000489272 PCED1AQ9H1Q7 454 aa6.19□□□□□ -1.42
CBWD1-216ENST00000489272 TLR3O15455 904 aaKnown RBP6.18□□□□□ -1.42
CBWD1-216ENST00000489272 DNAJA2O60884 412 aa6.18□□□□□ -1.42
CBWD1-216ENST00000489272 GARTP22102 1010 aa6.18□□□□□ -1.42
CBWD1-216ENST00000489272 GBP1P32455 592 aa6.18□□□□□ -1.42
CBWD1-216ENST00000489272 CLEC16AQ2KHT3 1053 aa6.18□□□□□ -1.42
CBWD1-216ENST00000489272 USP51Q70EK9 711 aa6.18□□□□□ -1.42
CBWD1-216ENST00000489272 SPPL2CQ8IUH8 684 aa6.18□□□□□ -1.42
CBWD1-216ENST00000489272 NAF1Q96HR8 494 aaKnown RBP6.18□□□□□ -1.42
CBWD1-216ENST00000489272 KIF2CQ99661 725 aa6.18□□□□□ -1.42
CBWD1-216ENST00000489272 LRRC3Q9BY71 257 aa6.18□□□□□ -1.42
CBWD1-216ENST00000489272 ASCC2Q9H1I8 757 aaPredicted RBP6.18□□□□□ -1.42
CBWD1-216ENST00000489272 SUPT16HQ9Y5B9 1047 aaKnown RBP6.18□□□□□ -1.42
CBWD1-216ENST00000489272 ROBO2Q9HCK4 1378 aa6.18□□□□□ -1.42
CBWD1-216ENST00000489272 RBM47A0AV96 593 aaKnown RBP6.17□□□□□ -1.42
CBWD1-216ENST00000489272 FZD7O75084 574 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 RAG1P15918 1043 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 EIF4A3P38919 411 aaKnown RBP6.17□□□□□ -1.42
CBWD1-216ENST00000489272 RNF4P78317 190 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 DUSP4Q13115 394 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 FBXL19Q6PCT2 694 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 MZB1Q8WU39 189 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 BCL2L13Q9BXK5 485 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 COPRSQ9NQ92 184 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 KCNQ5Q9NR82 932 aa6.17□□□□□ -1.42
CBWD1-216ENST00000489272 SHISA3A0PJX4 238 aa6.16□□□□□ -1.42
CBWD1-216ENST00000489272 RGS13O14921 159 aa6.16□□□□□ -1.42
CBWD1-216ENST00000489272 VIPR1P32241 457 aa6.16□□□□□ -1.42
CBWD1-216ENST00000489272 CDR1P51861 262 aa6.16□□□□□ -1.42
CBWD1-216ENST00000489272 ZNF326Q5BKZ1 582 aaKnown RBP6.16□□□□□ -1.42
CBWD1-216ENST00000489272 ADGRF1Q5T601 910 aa6.16□□□□□ -1.42
CBWD1-216ENST00000489272 HS2ST1Q7LGA3 356 aa6.16□□□□□ -1.42
CBWD1-216ENST00000489272 GMIPQ9P107 970 aa6.16□□□□□ -1.42
CBWD1-216ENST00000489272 PCDHB14Q9Y5E9 798 aa6.16□□□□□ -1.42
CBWD1-216ENST00000489272 TNFRSF18Q9Y5U5 241 aa6.16□□□□□ -1.42
CBWD1-216ENST00000489272 FFAR3O14843 346 aa6.15□□□□□ -1.42
CBWD1-216ENST00000489272 GALK1P51570 392 aa6.15□□□□□ -1.42
CBWD1-216ENST00000489272 CAP1Q01518 475 aa6.15□□□□□ -1.42
CBWD1-216ENST00000489272 CHRNEQ04844 493 aa6.15□□□□□ -1.42
CBWD1-216ENST00000489272 NMIQ13287 307 aaPredicted RBP6.15□□□□□ -1.42
CBWD1-216ENST00000489272 ARSHQ5FYA8 562 aa6.15□□□□□ -1.42
CBWD1-216ENST00000489272 TTC9BQ8N6N2 239 aa6.15□□□□□ -1.42
CBWD1-216ENST00000489272 ENOX1Q8TC92 643 aaKnown RBP6.15□□□□□ -1.42
CBWD1-216ENST00000489272 GIPC2Q8TF65 315 aa6.15□□□□□ -1.42
CBWD1-216ENST00000489272 RBM15Q96T37 977 aaKnown RBP eCLIP6.15□□□□□ -1.42
CBWD1-216ENST00000489272 BRMS1Q9HCU9 246 aa6.15□□□□□ -1.42
CBWD1-216ENST00000489272 USP40Q9NVE5 1235 aa6.15□□□□□ -1.42
CBWD1-216ENST00000489272 UBOX5O94941 541 aa6.14□□□□□ -1.43
CBWD1-216ENST00000489272 ATE1O95260 518 aa6.14□□□□□ -1.43
CBWD1-216ENST00000489272 TEKQ02763 1124 aa6.14□□□□□ -1.43
CBWD1-216ENST00000489272 ANKS4BQ8N8V4 417 aa6.14□□□□□ -1.43
CBWD1-216ENST00000489272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.14□□□□□ -1.43
CBWD1-216ENST00000489272 GGT7Q9UJ14 662 aa6.14□□□□□ -1.43
CBWD1-216ENST00000489272 GREM1O60565 184 aa6.13□□□□□ -1.43
CBWD1-216ENST00000489272 MRPL58Q14197 206 aaKnown RBP6.13□□□□□ -1.43
CBWD1-216ENST00000489272 OVOS1Q6IE37 1185 aa6.13□□□□□ -1.43
CBWD1-216ENST00000489272 IGDCC3Q8IVU1 814 aa6.13□□□□□ -1.43
CBWD1-216ENST00000489272 SYTL5Q8TDW5 730 aaPredicted RBP6.13□□□□□ -1.43
CBWD1-216ENST00000489272 ZNF296Q8WUU4 475 aaPredicted RBP6.13□□□□□ -1.43
CBWD1-216ENST00000489272 C8orf49Q96NF6 230 aa6.13□□□□□ -1.43
CBWD1-216ENST00000489272 CRKP46108 304 aa6.12□□□□□ -1.43
CBWD1-216ENST00000489272 RAD51AP2Q09MP3 1159 aa6.12□□□□□ -1.43
CBWD1-216ENST00000489272 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
CBWD1-216ENST00000489272 RNF111Q6ZNA4 994 aa6.12□□□□□ -1.43
CBWD1-216ENST00000489272 ZNF655Q8N720 491 aaPredicted RBP6.12□□□□□ -1.43
CBWD1-216ENST00000489272 SAMD11Q96NU1 681 aa6.12□□□□□ -1.43
CBWD1-216ENST00000489272 HDAC8Q9BY41 377 aa6.12□□□□□ -1.43
CBWD1-216ENST00000489272 EHMT1Q9H9B1 1298 aa6.12□□□□□ -1.43
CBWD1-216ENST00000489272 SSU72P8A0A1W2PR75 194 aa6.11□□□□□ -1.43
CBWD1-216ENST00000489272 POLR2BP30876 1174 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms