RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 TMOD4Q9NZQ9 345 aa18.55■□□□□ 0.56
CLDN11-208ENST00000488989 PPFIA3O75145 1194 aa18.54■□□□□ 0.56
CLDN11-208ENST00000488989 SYT1P21579 422 aa18.54■□□□□ 0.56
CLDN11-208ENST00000488989 SLC16A2P36021 539 aa18.54■□□□□ 0.56
CLDN11-208ENST00000488989 HUNKP57058 714 aa18.54■□□□□ 0.56
CLDN11-208ENST00000488989 DGKZQ13574 1117 aa18.54■□□□□ 0.56
CLDN11-208ENST00000488989 PFKFB3Q16875 520 aaPredicted RBP18.54■□□□□ 0.56
CLDN11-208ENST00000488989 SAPCD2Q86UD0 394 aa18.54■□□□□ 0.56
CLDN11-208ENST00000488989 CHMP5Q9NZZ3 219 aa18.54■□□□□ 0.56
CLDN11-208ENST00000488989 SMCHD1A6NHR9 2005 aa18.53■□□□□ 0.56
CLDN11-208ENST00000488989 ZBTB48P10074 688 aaPredicted RBP18.53■□□□□ 0.56
CLDN11-208ENST00000488989 SCG2P13521 617 aa18.53■□□□□ 0.56
CLDN11-208ENST00000488989 MOGSQ13724 837 aa18.53■□□□□ 0.56
CLDN11-208ENST00000488989 LARP1BQ659C4 914 aaKnown RBP18.53■□□□□ 0.56
CLDN11-208ENST00000488989 FAM177A1Q8N128 213 aaPredicted RBP18.53■□□□□ 0.56
CLDN11-208ENST00000488989 RRP36Q96EU6 259 aaKnown RBP18.53■□□□□ 0.56
CLDN11-208ENST00000488989 ALG1Q9BT22 464 aa18.53■□□□□ 0.56
CLDN11-208ENST00000488989 RPAP3Q9H6T3 665 aaPredicted RBP18.53■□□□□ 0.56
CLDN11-208ENST00000488989 PRR12Q9ULL5 1215 aa18.53■□□□□ 0.56
CLDN11-208ENST00000488989 TLL2Q9Y6L7 1015 aa18.53■□□□□ 0.56
CLDN11-208ENST00000488989 COL11A1P12107 1806 aaPredicted RBP18.53■□□□□ 0.56
CLDN11-208ENST00000488989 hCG_1984214I3L0E3 225 aa18.52■□□□□ 0.56
CLDN11-208ENST00000488989 STX6O43752 255 aa18.52■□□□□ 0.56
CLDN11-208ENST00000488989 NUCB2P80303 420 aa18.52■□□□□ 0.56
CLDN11-208ENST00000488989 SNAPC2Q13487 334 aa18.52■□□□□ 0.56
CLDN11-208ENST00000488989 SPRYD7Q5W111 196 aa18.52■□□□□ 0.56
CLDN11-208ENST00000488989 CATSPERGQ6ZRH7 1159 aa18.52■□□□□ 0.56
CLDN11-208ENST00000488989 ZNF713Q8N859 430 aaPredicted RBP18.52■□□□□ 0.56
CLDN11-208ENST00000488989 HHIPL1Q96JK4 782 aa18.52■□□□□ 0.56
CLDN11-208ENST00000488989 AIFM3Q96NN9 605 aa18.52■□□□□ 0.56
CLDN11-208ENST00000488989 PIGSQ96S52 555 aa18.52■□□□□ 0.56
CLDN11-208ENST00000488989 MYPNQ86TC9 1320 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 PNMA6FA0A0J9YX94 578 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 hCG_1642624A0A1W2PR95 340 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 TMEM88BA6NKF7 163 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 USP17L15C9J2P7 530 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 USP17L13C9JLJ4 530 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 USP17L11C9JVI0 530 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 USP17L18D6R9N7 530 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 USP17L22D6RA61 530 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 USP17L17D6RBQ6 530 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 USP17L19D6RCP7 530 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 USP17L20D6RJB6 530 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 ZBTB5O15062 677 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 BRD1O95696 1058 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 HOXA7P31268 230 aaPredicted RBP18.51■□□□□ 0.55
CLDN11-208ENST00000488989 USP17L24Q0WX57 530 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 FASTKD5Q7L8L6 764 aaKnown RBP18.51■□□□□ 0.55
CLDN11-208ENST00000488989 PRPF38AQ8NAV1 312 aaKnown RBP18.51■□□□□ 0.55
CLDN11-208ENST00000488989 FBXO18Q8NFZ0 1043 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 C8orf76Q96K31 380 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 SLF1Q9BQI6 1058 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 RANBP17Q9H2T7 1088 aaKnown RBP18.51■□□□□ 0.55
CLDN11-208ENST00000488989 VAT1LQ9HCJ6 419 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 SH3GLB2Q9NR46 395 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 FBXO28Q9NVF7 368 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 PPP1R9AQ9ULJ8 1098 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 ISY1Q9ULR0 285 aaKnown RBP18.51■□□□□ 0.55
CLDN11-208ENST00000488989 MTMR6Q9Y217 621 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 A0A0G2JMZ2 1700 aa18.51■□□□□ 0.55
CLDN11-208ENST00000488989 FDX1P10109 184 aa18.5■□□□□ 0.55
CLDN11-208ENST00000488989 PKP1Q13835 747 aa18.5■□□□□ 0.55
CLDN11-208ENST00000488989 RGMBQ6NW40 437 aa18.5■□□□□ 0.55
CLDN11-208ENST00000488989 RASAL3Q86YV0 1011 aa18.5■□□□□ 0.55
CLDN11-208ENST00000488989 SHISA4Q96DD7 197 aa18.5■□□□□ 0.55
CLDN11-208ENST00000488989 MS4A4AQ96JQ5 239 aa18.5■□□□□ 0.55
CLDN11-208ENST00000488989 BARHL2Q9NY43 387 aa18.5■□□□□ 0.55
CLDN11-208ENST00000488989 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.5■□□□□ 0.55
CLDN11-208ENST00000488989 SEC63Q9UGP8 760 aaKnown RBP18.5■□□□□ 0.55
CLDN11-208ENST00000488989 ZDHHC9Q9Y397 364 aa18.5■□□□□ 0.55
CLDN11-208ENST00000488989 WDR33Q9C0J8 1336 aaKnown RBP18.49■□□□□ 0.55
CLDN11-208ENST00000488989 MYH15Q9Y2K3 1946 aa18.49■□□□□ 0.55
CLDN11-208ENST00000488989 DSG3P32926 999 aa18.49■□□□□ 0.55
CLDN11-208ENST00000488989 GTF2A2P52657 109 aa18.49■□□□□ 0.55
CLDN11-208ENST00000488989 IKQ13123 557 aaPredicted RBP18.49■□□□□ 0.55
CLDN11-208ENST00000488989 CDC37Q16543 378 aaPredicted RBP18.49■□□□□ 0.55
CLDN11-208ENST00000488989 QRICH1Q2TAL8 776 aa18.49■□□□□ 0.55
CLDN11-208ENST00000488989 WWC2Q6AWC2 1192 aa18.49■□□□□ 0.55
CLDN11-208ENST00000488989 HOMER1Q86YM7 354 aa18.49■□□□□ 0.55
CLDN11-208ENST00000488989 TANGO6Q9C0B7 1094 aa18.49■□□□□ 0.55
CLDN11-208ENST00000488989 ADAMTS5Q9UNA0 930 aa18.49■□□□□ 0.55
CLDN11-208ENST00000488989 AGTPBP1Q9UPW5 1226 aa18.49■□□□□ 0.55
CLDN11-208ENST00000488989 STXBP3O00186 592 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 PPP1R11O60927 126 aaPredicted RBP18.48■□□□□ 0.55
CLDN11-208ENST00000488989 FLOT1O75955 427 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 XBP1P17861 261 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 COG2Q14746 738 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 TREML2Q5T2D2 321 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 KRT40Q6A162 431 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 GPAT2Q6NUI2 795 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 GADL1Q6ZQY3 521 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 PIBF1Q8WXW3 757 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 KIFC2Q96AC6 838 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 GJB4Q9NTQ9 266 aa18.48■□□□□ 0.55
CLDN11-208ENST00000488989 TESPA1A2RU30 521 aaPredicted RBP18.47■□□□□ 0.55
CLDN11-208ENST00000488989 H3BQV1 296 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 SLC10A3P09131 477 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 ZSCAN22P10073 491 aaPredicted RBP18.47■□□□□ 0.55
CLDN11-208ENST00000488989 CETPP11597 493 aa18.47■□□□□ 0.55
CLDN11-208ENST00000488989 ZNF157P51786 506 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 860.6 ms