RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 ATG4CQ96DT6 458 aa5.56□□□□□ -1.52
KDM3A-213ENST00000488971 KIRREL1Q96J84 757 aa5.56□□□□□ -1.52
KDM3A-213ENST00000488971 TOX2Q96NM4 488 aa5.56□□□□□ -1.52
KDM3A-213ENST00000488971 EPN3Q9H201 632 aa5.56□□□□□ -1.52
KDM3A-213ENST00000488971 PHAXQ9H814 394 aaKnown RBP5.56□□□□□ -1.52
KDM3A-213ENST00000488971 CARS2Q9HA77 564 aaKnown RBP5.56□□□□□ -1.52
KDM3A-213ENST00000488971 LMCD1Q9NZU5 365 aa5.56□□□□□ -1.52
KDM3A-213ENST00000488971 REV1Q9UBZ9 1251 aa5.56□□□□□ -1.52
KDM3A-213ENST00000488971 PFDN2Q9UHV9 154 aa5.56□□□□□ -1.52
KDM3A-213ENST00000488971 TPX2Q9ULW0 747 aaKnown RBP5.56□□□□□ -1.52
KDM3A-213ENST00000488971 PLAAQ9Y263 795 aa5.56□□□□□ -1.52
KDM3A-213ENST00000488971 SLC22A31A6NKX4 558 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 EIF5BO60841 1220 aaKnown RBP5.55□□□□□ -1.52
KDM3A-213ENST00000488971 LRIG2O94898 1065 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 EOMESO95936 686 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 NME1P15531 152 aaKnown RBP5.55□□□□□ -1.52
KDM3A-213ENST00000488971 TMEM67Q5HYA8 995 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 ZC3H12BQ5HYM0 836 aaKnown RBP5.55□□□□□ -1.52
KDM3A-213ENST00000488971 CDKAL1Q5VV42 579 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 FYB2Q5VWT5 728 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 UNC5AQ6ZN44 842 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 CYFIP1Q7L576 1253 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 NLRC3Q7RTR2 1065 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 ZSWIM2Q8NEG5 633 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 HSPA12BQ96MM6 686 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 PPP1R16BQ96T49 567 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 CNNM2Q9H8M5 875 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 KLHL42Q9P2K6 505 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 ADAM30Q9UKF2 790 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 CORINQ9Y5Q5 1042 aa5.55□□□□□ -1.52
KDM3A-213ENST00000488971 LTBP3Q9NS15 1303 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 PRAMEF27A3QJZ7 478 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 DNAJA2O60884 412 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 GLI1P08151 1106 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 PLCG1P19174 1290 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 RING1Q06587 406 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 PDE4BQ07343 736 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 ZYXQ15942 572 aaKnown RBP5.54□□□□□ -1.52
KDM3A-213ENST00000488971 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 DALRD3Q5D0E6 543 aaKnown RBP5.54□□□□□ -1.52
KDM3A-213ENST00000488971 LCE4AQ5TA78 99 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 VHLLQ6RSH7 139 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 KRT26Q7Z3Y9 468 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 ZSCAN18Q8TBC5 510 aaPredicted RBP5.54□□□□□ -1.52
KDM3A-213ENST00000488971 IRF2BPLQ9H1B7 796 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 ATP13A1Q9HD20 1204 aa5.54□□□□□ -1.52
KDM3A-213ENST00000488971 TYW1Q9NV66 732 aaKnown RBP5.54□□□□□ -1.52
KDM3A-213ENST00000488971 DDX56Q9NY93 547 aaKnown RBP5.54□□□□□ -1.52
KDM3A-213ENST00000488971 ADCY3O60266 1144 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 ASMTLO95671 621 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 SLC10A6Q3KNW5 377 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 PLEKHG6Q3KR16 790 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 SFRP5Q5T4F7 317 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 PRR23BQ6ZRT6 265 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 SYDE1Q6ZW31 735 aaPredicted RBP5.53□□□□□ -1.52
KDM3A-213ENST00000488971 NOL8Q76FK4 1167 aaKnown RBP5.53□□□□□ -1.52
KDM3A-213ENST00000488971 ANKLE2Q86XL3 938 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 LRRC47Q8N1G4 583 aaKnown RBP5.53□□□□□ -1.52
KDM3A-213ENST00000488971 STAG1Q8WVM7 1258 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 SLC26A8Q96RN1 970 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 SLC9A7Q96T83 725 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 MIPEPQ99797 713 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 SPATA9Q9BWV2 254 aa5.53□□□□□ -1.52
KDM3A-213ENST00000488971 CCDC163A0A0D9SF12 145 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 IQCA1LA6NCM1 817 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 PRR33A8MZF0 331 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.52□□□□□ -1.53
KDM3A-213ENST00000488971 H3BS24 57 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 SUSD5O60279 629 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 SLITRK5O94991 958 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 FAM153BP0C7A2 387 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 CCNFP41002 786 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 MFSD4AQ8N468 514 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 ZBTB38Q8NAP3 1195 aaPredicted RBP5.52□□□□□ -1.53
KDM3A-213ENST00000488971 KLHL6Q8WZ60 621 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 SGSM3Q96HU1 749 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 CHMP4AQ9BY43 222 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 ZNF214Q9UL59 606 aaPredicted RBP5.52□□□□□ -1.53
KDM3A-213ENST00000488971 CD2APQ9Y5K6 639 aa5.52□□□□□ -1.53
KDM3A-213ENST00000488971 NFIBO00712 420 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 TSPAN15O95858 294 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 CBX7O95931 251 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 CFPP27918 469 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 ZNF143P52747 638 aaPredicted RBP5.51□□□□□ -1.53
KDM3A-213ENST00000488971 ETF1P62495 437 aaKnown RBP5.51□□□□□ -1.53
KDM3A-213ENST00000488971 SLC7A5Q01650 507 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 TM4SF20Q53R12 229 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 KIAA1211LQ6NV74 962 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 LRRC56Q8IYG6 542 aaPredicted RBP5.51□□□□□ -1.53
KDM3A-213ENST00000488971 SLFN12Q8IYM2 578 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 ACSF2Q96CM8 615 aaPredicted RBP5.51□□□□□ -1.53
KDM3A-213ENST00000488971 CCDC120Q96HB5 630 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 DIRC2Q96SL1 478 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 SEMA3GQ9NS98 782 aa5.51□□□□□ -1.53
KDM3A-213ENST00000488971 RFPL3O75679 317 aa5.5□□□□□ -1.53
KDM3A-213ENST00000488971 PARNO95453 639 aaKnown RBP5.5□□□□□ -1.53
KDM3A-213ENST00000488971 PGRP06401 933 aa5.5□□□□□ -1.53
KDM3A-213ENST00000488971 PDGFRBP09619 1106 aa5.5□□□□□ -1.53
KDM3A-213ENST00000488971 GRK4P32298 578 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms