RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 DTHD1Q6ZMT9 781 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 KRT26Q7Z3Y9 468 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 HOMER1Q86YM7 354 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 ZDHHC14Q8IZN3 488 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 NME8Q8N427 588 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 JMYQ8N9B5 988 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 HNRNPLLQ8WVV9 542 aaKnown RBP4.54□□□□□ -1.68
PRPF4-203ENST00000488937 RPS6KC1Q96S38 1066 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 FEZ1Q99689 392 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 RSRP1Q9BUV0 290 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 SCAND2PQ9GZW5 306 aaPredicted RBP4.54□□□□□ -1.68
PRPF4-203ENST00000488937 CCDC113Q9H0I3 377 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 ATP13A1Q9HD20 1204 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 KCNQ5Q9NR82 932 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 PICK1Q9NRD5 415 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 PPP4R2Q9NY27 417 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 TERF2IPQ9NYB0 399 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 FAM8A1Q9UBU6 413 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 PPM1HQ9ULR3 514 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 EID1Q9Y6B2 187 aa4.54□□□□□ -1.68
PRPF4-203ENST00000488937 MAFGO15525 162 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 KCNQ2O43526 872 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 SLPIP03973 132 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 CENPBP07199 599 aaPredicted RBP4.53□□□□□ -1.68
PRPF4-203ENST00000488937 POU3F3P20264 500 aaPredicted RBP4.53□□□□□ -1.68
PRPF4-203ENST00000488937 GSTT1P30711 240 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 ZNF157P51786 506 aaPredicted RBP4.53□□□□□ -1.68
PRPF4-203ENST00000488937 EXOSC10Q01780 885 aaKnown RBP4.53□□□□□ -1.68
PRPF4-203ENST00000488937 COL9A2Q14055 689 aaPredicted RBP4.53□□□□□ -1.68
PRPF4-203ENST00000488937 ZC3H12AQ5D1E8 599 aaKnown RBP4.53□□□□□ -1.68
PRPF4-203ENST00000488937 CDC37L1Q7L3B6 337 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 TTC6Q86TZ1 520 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 FERMT3Q86UX7 667 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 IRF2BP1Q8IU81 584 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 KIAA0825Q8IV33 1275 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 MFSD4AQ8N468 514 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 MYLIPQ8WY64 445 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 HSPA12BQ96MM6 686 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 SPON2Q9BUD6 331 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 NOC4LQ9BVI4 516 aaKnown RBP4.53□□□□□ -1.68
PRPF4-203ENST00000488937 EMILIN2Q9BXX0 1053 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 TRIM55Q9BYV6 548 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 MCOLN1Q9GZU1 580 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 KBTBD4Q9NVX7 518 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 PRKAG3Q9UGI9 489 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 ADAMTS1Q9UHI8 967 aa4.53□□□□□ -1.68
PRPF4-203ENST00000488937 PEX10O60683 326 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 EVA1CP58658 441 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 CHMP4BP1P59074 171 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 SQSTM1Q13501 440 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 MAP9Q49MG5 647 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 C16orf86Q6ZW13 317 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 FRMD5Q7Z6J6 570 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 SP8Q8IXZ3 490 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 PRPF38AQ8NAV1 312 aaKnown RBP4.52□□□□□ -1.69
PRPF4-203ENST00000488937 NAF1Q96HR8 494 aaKnown RBP4.52□□□□□ -1.69
PRPF4-203ENST00000488937 EAF1Q96JC9 268 aaPredicted RBP4.52□□□□□ -1.69
PRPF4-203ENST00000488937 CCDC136Q96JN2 1154 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 COX4I2Q96KJ9 171 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 NECAB3Q96P71 396 aaPredicted RBP4.52□□□□□ -1.69
PRPF4-203ENST00000488937 SLC6A17Q9H1V8 727 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 HOMER2Q9NSB8 354 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 GINM1Q9NU53 330 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 TMEM39AQ9NV64 488 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 SLAMF8Q9P0V8 285 aa4.52□□□□□ -1.69
PRPF4-203ENST00000488937 HMGB1P1B2RPK0 211 aaPredicted RBP4.51□□□□□ -1.69
PRPF4-203ENST00000488937 USP17L7P0C7H9 530 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 PAX3P23760 479 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 GNALP38405 381 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 GDF5P43026 501 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 CDKN1CP49918 316 aaPredicted RBP4.51□□□□□ -1.69
PRPF4-203ENST00000488937 NFE2Q16621 373 aaPredicted RBP4.51□□□□□ -1.69
PRPF4-203ENST00000488937 ZNF827Q17R98 1081 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 TKFCQ3LXA3 575 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 SFRP5Q5T4F7 317 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 PDZD3Q86UT5 571 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 RAVER1Q8IY67 606 aaKnown RBP4.51□□□□□ -1.69
PRPF4-203ENST00000488937 ACSBG1Q96GR2 724 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 DNAJC7Q99615 494 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 APBA2Q99767 749 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 NT5C1AQ9BXI3 368 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 ADAM7Q9H2U9 754 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 GPN3Q9UHW5 284 aaPredicted RBP4.51□□□□□ -1.69
PRPF4-203ENST00000488937 TMEM59LQ9UK28 342 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 EFR3BQ9Y2G0 817 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 MRVI1Q9Y6F6 885 aa4.51□□□□□ -1.69
PRPF4-203ENST00000488937 H3BS24 57 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 CYR61O00622 381 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 ENC1O14682 589 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 KIF3BO15066 747 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 FANCGO15287 622 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 LRIG2O94898 1065 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 EOMESO95936 686 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 HPXP02790 462 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 ZNF252P-AS1Q0IIN9 211 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 RASGRF1Q13972 1273 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 LONRF3Q496Y0 759 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 C2orf27AQ580R0 203 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 BRDTQ58F21 947 aaPredicted RBP4.5□□□□□ -1.69
PRPF4-203ENST00000488937 CDKAL1Q5VV42 579 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms