RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 PARP3Q9Y6F1 533 aa7.6□□□□□ -1.19
HDLBP-243ENST00000488923 COL4A1P02462 1669 aa7.6□□□□□ -1.19
HDLBP-243ENST00000488923 TNRC6CQ9HCJ0 1690 aaKnown RBP7.6□□□□□ -1.19
HDLBP-243ENST00000488923 UBR3Q6ZT12 1888 aa7.6□□□□□ -1.19
HDLBP-243ENST00000488923 TCHHQ07283 1943 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 TRIM75PA6NK02 468 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 KIF28PB7ZC32 967 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 C6orf229H3BNL8 230 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 ZBTB24O43167 697 aaPredicted RBP7.59□□□□□ -1.19
HDLBP-243ENST00000488923 NEMFO60524 1076 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 ZNF202O95125 648 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 SNRPBP14678 240 aaKnown RBP7.59□□□□□ -1.19
HDLBP-243ENST00000488923 PFKFB1P16118 471 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 BTDP43251 543 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 NDUFA8P51970 172 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 TERF1P54274 439 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 FKBP1AP62942 108 aaKnown RBP7.59□□□□□ -1.19
HDLBP-243ENST00000488923 DDR1Q08345 913 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 FUT2Q10981 343 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 GRIPAP1Q4V328 841 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 CT47A1Q5JQC4 288 aaPredicted RBP7.59□□□□□ -1.19
HDLBP-243ENST00000488923 AXDND1Q5T1B0 1012 aaPredicted RBP7.59□□□□□ -1.19
HDLBP-243ENST00000488923 RESP18Q5W5W9 173 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 TXNRD3Q86VQ6 643 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 CCDC24Q8N4L8 307 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 CCDC148Q8NFR7 591 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 CCDC12Q8WUD4 166 aaPredicted RBP7.59□□□□□ -1.19
HDLBP-243ENST00000488923 UBE2Q2Q8WVN8 375 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 PHF20Q9BVI0 1012 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 RTFDC1Q9BY42 306 aaPredicted RBP7.59□□□□□ -1.19
HDLBP-243ENST00000488923 FTOQ9C0B1 505 aaKnown RBP eCLIP7.59□□□□□ -1.19
HDLBP-243ENST00000488923 GOLPH3LQ9H4A5 285 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 HPSEQ9Y251 543 aa7.59□□□□□ -1.19
HDLBP-243ENST00000488923 MYO3BQ8WXR4 1341 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 MYO5AQ9Y4I1 1855 aaKnown RBP7.58□□□□□ -1.2
HDLBP-243ENST00000488923 A0A1B0GVL5 298 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 WTIPA6NIX2 430 aaPredicted RBP7.58□□□□□ -1.2
HDLBP-243ENST00000488923 BTBD18B2RXH4 712 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 hCG_1984214I3L0E3 225 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 IKBKBO14920 756 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 APBA3O96018 575 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 TSPY3P0CV98 308 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 TSPY8P0CW00 308 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 SRGNP10124 158 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 SCG2P13521 617 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 NLRP12P59046 1061 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 NLRP5P59047 1200 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 TFAP4Q01664 338 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 GRM4Q14833 912 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 PFKFB3Q16875 520 aaPredicted RBP7.58□□□□□ -1.2
HDLBP-243ENST00000488923 MFSD14BQ5SR56 506 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 CC2D2BQ6DHV5 1058 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 STYK1Q6J9G0 422 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 C16orf86Q6ZW13 317 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 TEX11Q8IYF3 940 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 MPNDQ8N594 471 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 ZNF713Q8N859 430 aaPredicted RBP7.58□□□□□ -1.2
HDLBP-243ENST00000488923 TRIML1Q8N9V2 468 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 ZSCAN1Q8NBB4 408 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 PNMA1Q8ND90 353 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 CNNM3Q8NE01 707 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 SNIP1Q8TAD8 396 aaKnown RBP7.58□□□□□ -1.2
HDLBP-243ENST00000488923 SH3RF3Q8TEJ3 882 aaPredicted RBP7.58□□□□□ -1.2
HDLBP-243ENST00000488923 MASTLQ96GX5 879 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 MRFAP1L1Q96HT8 127 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 AIFM3Q96NN9 605 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 MRIQ9BWK5 157 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 TRIM5Q9C035 493 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 DNAJC25Q9H1X3 360 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 SWAP70Q9UH65 585 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 TUBE1Q9UJT0 475 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 KCNH3Q9ULD8 1083 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 SRPRBQ9Y5M8 271 aaKnown RBP7.58□□□□□ -1.2
HDLBP-243ENST00000488923 CASZ1Q86V15 1759 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 CHD4Q14839 1912 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 MYH15Q9Y2K3 1946 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 CCDC88AQ3V6T2 1871 aa7.58□□□□□ -1.2
HDLBP-243ENST00000488923 CNTNAP5Q8WYK1 1306 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 LAMB1P07942 1786 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 MYH13Q9UKX3 1938 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 CYP2D7A0A087X1C5 515 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 LAD1O00515 517 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 NRDCO43847 1150 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 PPFIA3O75145 1194 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 OFD1O75665 1012 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 USP17L8P0C7I0 530 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 ZNF75DP51815 510 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 HDLBPQ00341 1268 aaKnown RBP7.57□□□□□ -1.2
HDLBP-243ENST00000488923 SEMA3FQ13275 785 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 ORC2Q13416 577 aaPredicted RBP7.57□□□□□ -1.2
HDLBP-243ENST00000488923 IQCB1Q15051 598 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 PKN1Q16512 942 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 SHC4Q6S5L8 630 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 OLFM4Q6UX06 510 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 DPP8Q6V1X1 898 aaPredicted RBP7.57□□□□□ -1.2
HDLBP-243ENST00000488923 PODNQ7Z5L7 613 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 LUZP1Q86V48 1076 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 PLA2G4DQ86XP0 818 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 DRC7Q8IY82 874 aa7.57□□□□□ -1.2
HDLBP-243ENST00000488923 STK11IPQ8N1F8 1099 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms