RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 GMCL1Q96IK5 515 aa13.17□□□□□ -0.3
ARHGEF39-204ENST00000488918 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.17□□□□□ -0.3
ARHGEF39-204ENST00000488918 TCP11L1Q9NUJ3 509 aa13.17□□□□□ -0.3
ARHGEF39-204ENST00000488918 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
ARHGEF39-204ENST00000488918 SGPL1O95470 568 aa13.16□□□□□ -0.3
ARHGEF39-204ENST00000488918 FGRP09769 529 aa13.16□□□□□ -0.3
ARHGEF39-204ENST00000488918 GJA8P48165 433 aa13.16□□□□□ -0.3
ARHGEF39-204ENST00000488918 GRB14Q14449 540 aa13.16□□□□□ -0.3
ARHGEF39-204ENST00000488918 KCTD1Q719H9 257 aa13.16□□□□□ -0.3
ARHGEF39-204ENST00000488918 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
ARHGEF39-204ENST00000488918 HTATIP2Q9BUP3 242 aa13.16□□□□□ -0.3
ARHGEF39-204ENST00000488918 B4E1Z4 1266 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 DHX16O60231 1041 aaKnown RBP13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 OAZ1P54368 228 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 TBC1D10CQ8IV04 446 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 TRIB2Q92519 343 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 DPF3Q92784 378 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 TMEM47Q9BQJ4 181 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 ZKSCAN3Q9BRR0 538 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 RAVER2Q9HCJ3 691 aaKnown RBP13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 IL17RBQ9NRM6 502 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 HOMER2Q9NSB8 354 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
ARHGEF39-204ENST00000488918 ZSWIM8A7E2V4 1837 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 MSCO60682 206 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 FARP2O94887 1054 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 BMP2KLQ5H9B9 411 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 IFIT1BQ5T764 474 aaKnown RBP13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 RNF20Q5VTR2 975 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 CHST13Q8NET6 341 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 SLC38A10Q9HBR0 1119 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 GPCPD1Q9NPB8 672 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 ANO2Q9NQ90 1003 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 ADAMTS5Q9UNA0 930 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
ARHGEF39-204ENST00000488918 NEDD4P46934 1319 aa13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 MGAMO43451 1857 aa13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 SGSM2O43147 1006 aa13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 ALAS1P13196 640 aa13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 CCL14Q16627 93 aa13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 TKFCQ3LXA3 575 aa13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 GPATCH4Q5T3I0 446 aaKnown RBP13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 OLFML2BQ68BL8 750 aa13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 USP6NLQ92738 828 aa13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF39-204ENST00000488918 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 PLA2G6O60733 806 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 HOXC6P09630 235 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 SYDE2Q5VT97 1194 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 NECAB2Q7Z6G3 386 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 PNMA1Q8ND90 353 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 MPHOSPH6Q99547 160 aaKnown RBP13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 PAK6Q9NQU5 681 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 ZNF214Q9UL59 606 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 TNKSO95271 1327 aa13.12□□□□□ -0.31
ARHGEF39-204ENST00000488918 IFIT3O14879 490 aaKnown RBP13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 CDC45O75419 566 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 PGK2P07205 417 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 PARP1P09874 1014 aaKnown RBP13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 CYP2C19P33261 490 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 SLC16A2P36021 539 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 TRIM32Q13049 653 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 ANKLE1Q8NAG6 615 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 NPLOC4Q8TAT6 608 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 TRERF1Q96PN7 1200 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 PRR12Q9ULL5 1215 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 DIS3Q9Y2L1 958 aaKnown RBP13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 NR2E3Q9Y5X4 410 aa13.11□□□□□ -0.31
ARHGEF39-204ENST00000488918 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 PDHBP11177 359 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 PTH1RQ03431 593 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 ASPRV1Q53RT3 343 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 MAML3Q96JK9 1138 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 ESYT1Q9BSJ8 1104 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 NBPF3Q9H094 633 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 RNF146Q9NTX7 359 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 PPP4R2Q9NY27 417 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 RBM8AQ9Y5S9 174 aaKnown RBP13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 PFASO15067 1338 aa13.1□□□□□ -0.31
ARHGEF39-204ENST00000488918 B4DLN1 442 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 E7EWF7 191 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 EVI5O60447 810 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 COBLO75128 1261 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 ICAM1P05362 532 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 CCND3P30281 292 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 MRPL12P52815 198 aaKnown RBP13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 ZNF543Q08ER8 600 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 WTAPQ15007 396 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms