RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 GOLPH3LQ9H4A5 285 aa15.22■□□□□ 0.03
CHD1L-208ENST00000488864 NMRK2Q9NPI5 230 aa15.22■□□□□ 0.03
CHD1L-208ENST00000488864 IGKV6D-41A0A0C4DH26 115 aa15.22■□□□□ 0.03
CHD1L-208ENST00000488864 CPLX1O14810 134 aa15.22■□□□□ 0.03
CHD1L-208ENST00000488864 TBC1D12O60347 775 aa15.22■□□□□ 0.03
CHD1L-208ENST00000488864 FOSBP53539 338 aa15.22■□□□□ 0.03
CHD1L-208ENST00000488864 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
CHD1L-208ENST00000488864 GLIS2Q9BZE0 524 aaPredicted RBP15.22■□□□□ 0.03
CHD1L-208ENST00000488864 FAM217BQ9NTX9 383 aaPredicted RBP15.22■□□□□ 0.03
CHD1L-208ENST00000488864 PITPNM2Q9BZ72 1349 aa15.21■□□□□ 0.03
CHD1L-208ENST00000488864 PLIN4Q96Q06 1357 aa15.21■□□□□ 0.03
CHD1L-208ENST00000488864 FBXO38Q6PIJ6 1188 aa15.21■□□□□ 0.03
CHD1L-208ENST00000488864 TMEM179Q6ZVK1 233 aa15.21■□□□□ 0.03
CHD1L-208ENST00000488864 DHX40Q8IX18 779 aaKnown RBP15.21■□□□□ 0.03
CHD1L-208ENST00000488864 FANCBQ8NB91 859 aa15.21■□□□□ 0.03
CHD1L-208ENST00000488864 CABP5Q9NP86 173 aa15.21■□□□□ 0.03
CHD1L-208ENST00000488864 PHF20L1A8MW92 1017 aa15.21■□□□□ 0.02
CHD1L-208ENST00000488864 TTLL1O95922 423 aa15.21■□□□□ 0.02
CHD1L-208ENST00000488864 EEF2P13639 858 aaKnown RBP15.21■□□□□ 0.02
CHD1L-208ENST00000488864 INPP5BP32019 993 aa15.21■□□□□ 0.02
CHD1L-208ENST00000488864 NT5C2P49902 561 aa15.21■□□□□ 0.02
CHD1L-208ENST00000488864 ICA1Q05084 483 aa15.21■□□□□ 0.02
CHD1L-208ENST00000488864 TERF2Q15554 542 aa15.21■□□□□ 0.02
CHD1L-208ENST00000488864 ELF2Q15723 593 aa15.21■□□□□ 0.02
CHD1L-208ENST00000488864 RTN1Q16799 776 aa15.21■□□□□ 0.02
CHD1L-208ENST00000488864 MAP1SQ66K74 1059 aaPredicted RBP15.21■□□□□ 0.02
CHD1L-208ENST00000488864 CCAR1Q8IX12 1150 aaKnown RBP15.21■□□□□ 0.02
CHD1L-208ENST00000488864 NSUN7Q8NE18 718 aaKnown RBP15.21■□□□□ 0.02
CHD1L-208ENST00000488864 PHKBQ93100 1093 aa15.21■□□□□ 0.02
CHD1L-208ENST00000488864 PTPDC1A2A3K4 754 aa15.2■□□□□ 0.02
CHD1L-208ENST00000488864 H3BQV1 296 aa15.2■□□□□ 0.02
CHD1L-208ENST00000488864 CAVIN2O95810 425 aa15.2■□□□□ 0.02
CHD1L-208ENST00000488864 VEGFAP15692 232 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-208ENST00000488864 CAP2P40123 477 aa15.2■□□□□ 0.02
CHD1L-208ENST00000488864 MAP3K10Q02779 954 aa15.2■□□□□ 0.02
CHD1L-208ENST00000488864 CCDC178Q5BJE1 867 aa15.2■□□□□ 0.02
CHD1L-208ENST00000488864 IFFO2Q5TF58 517 aa15.2■□□□□ 0.02
CHD1L-208ENST00000488864 PNMA8AQ86V59 439 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-208ENST00000488864 CCAR2Q8N163 923 aaKnown RBP15.2■□□□□ 0.02
CHD1L-208ENST00000488864 ERCC4Q92889 916 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-208ENST00000488864 FAM53CQ9NYF3 392 aa15.2■□□□□ 0.02
CHD1L-208ENST00000488864 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
CHD1L-208ENST00000488864 BAZ2BQ9UIF8 2168 aaKnown RBP15.2■□□□□ 0.02
CHD1L-208ENST00000488864 UBE2Q2LH0YL09 131 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 GOLGA8HP0CJ92 632 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 FMR1Q06787 632 aaKnown RBP eCLIP15.19■□□□□ 0.023e-7■■■□□ 16.3
CHD1L-208ENST00000488864 STX1AQ16623 288 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 SIAH1Q8IUQ4 282 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 KRT222Q8N1A0 295 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 ANKS1AQ92625 1134 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 ZKSCAN4Q969J2 545 aaPredicted RBP15.19■□□□□ 0.02
CHD1L-208ENST00000488864 WRNIP1Q96S55 665 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 KANSL2Q9H9L4 492 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 SCN4AP35499 1836 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 NEMFO60524 1076 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 TOP1P11387 765 aaKnown RBP15.19■□□□□ 0.02
CHD1L-208ENST00000488864 SNW1Q13573 536 aaKnown RBP15.19■□□□□ 0.02
CHD1L-208ENST00000488864 ZC3H15Q8WU90 426 aaKnown RBP15.19■□□□□ 0.02
CHD1L-208ENST00000488864 ST7Q9NRC1 585 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 SSC5DA1L4H1 1573 aa15.19■□□□□ 0.02
CHD1L-208ENST00000488864 PLEKHA8P1O95397 391 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 ECE1P42892 770 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 DCAF15Q66K64 600 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 USP17L2Q6R6M4 530 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 STAG2Q8N3U4 1231 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 CFAP45Q9UL16 551 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 PPP2R3BQ9Y5P8 575 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 WDR90Q96KV7 1748 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 A0A1W2PRG0 241 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 DHX16O60231 1041 aaKnown RBP15.18■□□□□ 0.02
CHD1L-208ENST00000488864 DDAH1O94760 285 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 NOVP48745 357 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 SUPT20HL1Q3ZLR7 823 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-208ENST00000488864 ACER1Q8TDN7 264 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 ERO1AQ96HE7 468 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 CPVLQ9H3G5 476 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 ZNF446Q9NWS9 450 aa15.18■□□□□ 0.02
CHD1L-208ENST00000488864 hCG_1642624A0A1W2PR95 340 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 USP17L5A8MUK1 530 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 BECN2A8MW95 431 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 ZYXQ15942 572 aaKnown RBP15.17■□□□□ 0.02
CHD1L-208ENST00000488864 NTRK3Q16288 839 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 ZNF341Q9BYN7 854 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 ZSCAN16Q9H4T2 348 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-208ENST00000488864 RCOR1Q9UKL0 485 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 TRAF5O00463 557 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 MOB2Q70IA6 237 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 NBPF11Q86T75 865 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 LRRN4CLQ8ND94 238 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 CDCA5Q96FF9 252 aa15.17■□□□□ 0.02
CHD1L-208ENST00000488864 FRMPD2Q68DX3 1309 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-208ENST00000488864 ASNSP08243 561 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 CALM1P0DP23 149 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 CALM2P0DP24 149 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 CALM3P0DP25 149 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 FDPSP14324 419 aaKnown RBP15.16■□□□□ 0.02
CHD1L-208ENST00000488864 TAF3Q5VWG9 929 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 SPICE1Q8N0Z3 855 aa15.16■□□□□ 0.02
CHD1L-208ENST00000488864 AOPEPQ8N6M6 819 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms