RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 FBXO28Q9NVF7 368 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 FEM1BQ9UK73 627 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 BTBD19C9JJ37 291 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 HSP90AA1P07900 732 aaKnown RBP14.31□□□□□ -0.12
TRAIP-209ENST00000488860 KIF23Q02241 960 aaPredicted RBP14.31□□□□□ -0.12
TRAIP-209ENST00000488860 SREBF2Q12772 1141 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 NOGQ13253 232 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 PABPC4Q13310 644 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAIP-209ENST00000488860 SYDE2Q5VT97 1194 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 GPAT2Q6NUI2 795 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 FAM160B2Q86V87 743 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 HOMER1Q86YM7 354 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 SRBD1Q8N5C6 995 aaKnown RBP14.31□□□□□ -0.12
TRAIP-209ENST00000488860 ZIC5Q96T25 663 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 SLF1Q9BQI6 1058 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 VAT1LQ9HCJ6 419 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 FAM217BQ9NTX9 383 aaPredicted RBP14.31□□□□□ -0.12
TRAIP-209ENST00000488860 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 CNTNAP5Q8WYK1 1306 aa14.31□□□□□ -0.12
TRAIP-209ENST00000488860 WDR33Q9C0J8 1336 aaKnown RBP14.31□□□□□ -0.12
TRAIP-209ENST00000488860 PDHXO00330 501 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 CDKL5O76039 1030 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 OSBPP22059 807 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 VEGFBP49765 207 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 SNAP25P60880 206 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 PPP2R5BQ15173 497 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 ANKRD23Q86SG2 305 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 NBPF11Q86T75 865 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 FAM43AQ8N2R8 423 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 CHURC1Q8WUH1 139 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 PHKBQ93100 1093 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 LZTS2Q9BRK4 669 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 SLC26A6Q9BXS9 759 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 PNMA3Q9UL41 463 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 CTDP1Q9Y5B0 961 aaPredicted RBP14.3□□□□□ -0.12
TRAIP-209ENST00000488860 SMCHD1A6NHR9 2005 aa14.3□□□□□ -0.12
TRAIP-209ENST00000488860 hCG_1642624A0A1W2PR95 340 aa14.29□□□□□ -0.12
TRAIP-209ENST00000488860 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
TRAIP-209ENST00000488860 JAK2O60674 1132 aa14.29□□□□□ -0.12
TRAIP-209ENST00000488860 AKAP17AQ02040 695 aaKnown RBP14.29□□□□□ -0.12
TRAIP-209ENST00000488860 ADGRF4Q8IZF3 695 aa14.29□□□□□ -0.12
TRAIP-209ENST00000488860 SPRYD3Q8NCJ5 442 aa14.29□□□□□ -0.12
TRAIP-209ENST00000488860 ATG4CQ96DT6 458 aa14.29□□□□□ -0.12
TRAIP-209ENST00000488860 ASCC2Q9H1I8 757 aaPredicted RBP14.29□□□□□ -0.12
TRAIP-209ENST00000488860 PPP1R9AQ9ULJ8 1098 aa14.29□□□□□ -0.12
TRAIP-209ENST00000488860 PRR12Q9ULL5 1215 aa14.29□□□□□ -0.12
TRAIP-209ENST00000488860 TESPA1A2RU30 521 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 SPDYE16A6NNV3 312 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 IGF2BP3O00425 579 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 CYTH3O43739 400 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 CTDNEP1O95476 244 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 CYP2C8P10632 490 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 IFNAR1P17181 557 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 HOXA7P31268 230 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 SSRP1Q08945 709 aaKnown RBP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 CDC37Q16543 378 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 SLC35G1Q2M3R5 365 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 CCDC174Q6PII3 467 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 BTNL9Q6UXG8 535 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 IFNL1Q8IU54 200 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 TRIM22Q8IYM9 498 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 NSUN7Q8NE18 718 aaKnown RBP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 SMCR8Q8TEV9 937 aaPredicted RBP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 RRP36Q96EU6 259 aaKnown RBP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 DDX11Q96FC9 970 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 PTPN18Q99952 460 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 SPZ1Q9BXG8 430 aa14.28□□□□□ -0.12
TRAIP-209ENST00000488860 SEC63Q9UGP8 760 aaKnown RBP14.28□□□□□ -0.12
TRAIP-209ENST00000488860 PLXNB2O15031 1838 aa14.27□□□□□ -0.12
TRAIP-209ENST00000488860 PLA2G6O60733 806 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 DSG3P32926 999 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 FOSBP53539 338 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 INHBEP58166 350 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 HERVK_113P62684 666 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 CUL4AQ13619 759 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 COG2Q14746 738 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 TAF1CQ15572 869 aaPredicted RBP14.27□□□□□ -0.13
TRAIP-209ENST00000488860 NTRK3Q16288 839 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 OTUD7BQ6GQQ9 843 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 PRPF38AQ8NAV1 312 aaKnown RBP14.27□□□□□ -0.13
TRAIP-209ENST00000488860 PIGSQ96S52 555 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 PARK7Q99497 189 aaKnown RBP14.27□□□□□ -0.13
TRAIP-209ENST00000488860 PAGR1Q9BTK6 254 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 JMJD4Q9H9V9 463 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 DAXXQ9UER7 740 aaPredicted RBP14.27□□□□□ -0.13
TRAIP-209ENST00000488860 SLC45A1Q9Y2W3 748 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.27□□□□□ -0.13
TRAIP-209ENST00000488860 MGAMO43451 1857 aa14.27□□□□□ -0.13
TRAIP-209ENST00000488860 MYPNQ86TC9 1320 aa14.26□□□□□ -0.13
TRAIP-209ENST00000488860 ZBED4O75132 1171 aa14.26□□□□□ -0.13
TRAIP-209ENST00000488860 FMNL1O95466 1100 aaPredicted RBP14.26□□□□□ -0.13
TRAIP-209ENST00000488860 TAL1P17542 331 aaPredicted RBP14.26□□□□□ -0.13
TRAIP-209ENST00000488860 SLC4A3P48751 1232 aa14.26□□□□□ -0.13
TRAIP-209ENST00000488860 FUT2Q10981 343 aa14.26□□□□□ -0.13
TRAIP-209ENST00000488860 QRICH1Q2TAL8 776 aa14.26□□□□□ -0.13
TRAIP-209ENST00000488860 FAM184AQ8NB25 1140 aa14.26□□□□□ -0.13
TRAIP-209ENST00000488860 P2RX7Q99572 595 aaKnown RBP14.26□□□□□ -0.13
TRAIP-209ENST00000488860 LLPHQ9BRT6 129 aaKnown RBP14.26□□□□□ -0.13
TRAIP-209ENST00000488860 RNF26Q9BY78 433 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms