RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 CLEC16AQ2KHT3 1053 aa6.63□□□□□ -1.35
SRRM1-215ENST00000488317 FNDC3BQ53EP0 1204 aaKnown RBP6.63□□□□□ -1.35
SRRM1-215ENST00000488317 GTF2IRD2BQ6EKJ0 949 aa6.63□□□□□ -1.35
SRRM1-215ENST00000488317 TMC3Q7Z5M5 1100 aa6.63□□□□□ -1.35
SRRM1-215ENST00000488317 GTF2IRD2Q86UP8 949 aa6.63□□□□□ -1.35
SRRM1-215ENST00000488317 OSBP2Q969R2 916 aa6.63□□□□□ -1.35
SRRM1-215ENST00000488317 FAM83CQ9BQN1 747 aa6.63□□□□□ -1.35
SRRM1-215ENST00000488317 CNTNAP4Q9C0A0 1308 aa6.63□□□□□ -1.35
SRRM1-215ENST00000488317 CHST7Q9NS84 486 aa6.63□□□□□ -1.35
SRRM1-215ENST00000488317 GTF2IRD1Q9UHL9 959 aa6.63□□□□□ -1.35
SRRM1-215ENST00000488317 DNAJC25-GNG10A0A024R161 153 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 RBAK-RBAKDNI3L0D1 243 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 RFPL3O75679 317 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 SNRPB2P08579 225 aaKnown RBP6.62□□□□□ -1.35
SRRM1-215ENST00000488317 KIR3DL1P43629 444 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 AMPD2Q01433 879 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 NMIQ13287 307 aaPredicted RBP6.62□□□□□ -1.35
SRRM1-215ENST00000488317 DPY19L1Q2PZI1 675 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 TM4SF20Q53R12 229 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 CT47A1Q5JQC4 288 aaPredicted RBP6.62□□□□□ -1.35
SRRM1-215ENST00000488317 DTWD2Q8NBA8 298 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 KCTD13Q8WZ19 329 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 MRPL4Q9BYD3 311 aaKnown RBP6.62□□□□□ -1.35
SRRM1-215ENST00000488317 PRR13Q9NZ81 148 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 STOML1Q9UBI4 398 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 NDOR1Q9UHB4 597 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 SFMBT1Q9UHJ3 866 aa6.62□□□□□ -1.35
SRRM1-215ENST00000488317 GPR55Q9Y2T6 319 aaPredicted RBP6.62□□□□□ -1.35
SRRM1-215ENST00000488317 GNAT3A8MTJ3 354 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 SIGLEC6O43699 453 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 PRAMEF1O95521 474 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 ITIH2P19823 946 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 HOXC12P31275 282 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 ECI1P42126 302 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 AMPD3Q01432 767 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 GRB10Q13322 594 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 SF1Q15637 639 aaKnown RBP6.61□□□□□ -1.35
SRRM1-215ENST00000488317 CYP27C1Q4G0S4 372 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 CWF19L1Q69YN2 538 aaKnown RBP6.61□□□□□ -1.35
SRRM1-215ENST00000488317 CNNM4Q6P4Q7 775 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 OGFOD3Q6PK18 319 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 ARHGAP27Q6ZUM4 889 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 CHAC2Q8WUX2 184 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 CCDC140Q96MF4 163 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 CLUHP3Q96NS8 147 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 MINPP1Q9UNW1 487 aa6.61□□□□□ -1.35
SRRM1-215ENST00000488317 HMX2A2RU54 273 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 BLACEA4D250 179 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 FAM155AB1AL88 458 aaPredicted RBP6.6□□□□□ -1.35
SRRM1-215ENST00000488317 DLX3O60479 287 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 RAB11FIP3O75154 756 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 ADMP35318 185 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 POU4F1Q01851 419 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 GPAT2Q6NUI2 795 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 KRT26Q7Z3Y9 468 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 FBXL6Q8N531 539 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 Q96M66 194 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 NKX2-4Q9H2Z4 354 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 RAXQ9Y2V3 346 aa6.6□□□□□ -1.35
SRRM1-215ENST00000488317 PRR33A8MZF0 331 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 H0Y8X5 98 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 PDE8AO60658 829 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 CPP00450 1065 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 APPP05067 770 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 VIL1P09327 827 aaKnown RBP6.59□□□□□ -1.35
SRRM1-215ENST00000488317 SOX5P35711 763 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 CHRNA4P43681 627 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 GFRA1P56159 465 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 GABREP78334 506 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 DUSP27Q5VZP5 1158 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 FAM214BQ7L5A3 538 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 ZAR1Q86SH2 424 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 MFSD4AQ8N468 514 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 UBR7Q8N806 425 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 TP53INP1Q96A56 240 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 MFSD14AQ96MC6 490 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 HEXIM2Q96MH2 286 aaKnown RBP6.59□□□□□ -1.35
SRRM1-215ENST00000488317 C7orf69Q9H7B7 122 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 CAAP1Q9H8G2 361 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 CYP26B1Q9NR63 512 aa6.59□□□□□ -1.35
SRRM1-215ENST00000488317 FAM181BA6NEQ2 426 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 FAM170BA6NMN3 283 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 C1QTNF9BB2RNN3 333 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 CAPNS1P04632 268 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 GSNP06396 782 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 CD3EP07766 207 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 SDSP20132 328 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 NOP2P46087 812 aaKnown RBP6.58□□□□□ -1.36
SRRM1-215ENST00000488317 CYP27A1Q02318 531 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 TNK2Q07912 1038 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 MAP4K2Q12851 820 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 PRSS53Q2L4Q9 553 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 USP53Q70EK8 1073 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 CD163Q86VB7 1156 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 THNSL2Q86YJ6 484 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 TMEM145Q8NBT3 493 aa6.58□□□□□ -1.36
SRRM1-215ENST00000488317 MAGEC2Q9UBF1 373 aaPredicted RBP6.58□□□□□ -1.36
SRRM1-215ENST00000488317 A0A087X0B3 334 aa6.57□□□□□ -1.36
SRRM1-215ENST00000488317 SSU72P8A0A1W2PR75 194 aa6.57□□□□□ -1.36
SRRM1-215ENST00000488317 SHISA3A0PJX4 238 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms