RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 IDI2Q9BXS1 227 aa18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 DHX36Q9H2U1 1008 aaKnown RBP18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 MTMR7Q9Y216 660 aa18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 GNA11P29992 359 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 GSDMDP57764 484 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 DHX8Q14562 1220 aaKnown RBP18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 E2F4Q16254 413 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 RASGRP2Q7LDG7 609 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 KRT25Q7Z3Z0 450 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 CCDC17Q96LX7 622 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 XPO4Q9C0E2 1151 aaKnown RBP18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 KCNQ5Q9NR82 932 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 NAPAP54920 295 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 FANCCQ00597 558 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 SF3B2Q13435 895 aaKnown RBP18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 CCDC125Q86Z20 511 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 LRRC8AQ8IWT6 810 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 IQUBQ8NA54 791 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 SUPT20HQ8NEM7 779 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 C6orf50Q9HD87 102 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 IFNKQ9P0W0 207 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 SERPINA10Q9UK55 444 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
RAPGEF3-211ENST00000488250 CHRNA5P30532 468 aa18.18■□□□□ 0.5
RAPGEF3-211ENST00000488250 NFIAQ12857 509 aa18.18■□□□□ 0.5
RAPGEF3-211ENST00000488250 LRMPQ12912 555 aa18.18■□□□□ 0.5
RAPGEF3-211ENST00000488250 GRAMD1CQ8IYS0 662 aa18.18■□□□□ 0.5
RAPGEF3-211ENST00000488250 ENOX1Q8TC92 643 aaKnown RBP18.18■□□□□ 0.5
RAPGEF3-211ENST00000488250 RASGRP4Q8TDF6 673 aa18.18■□□□□ 0.5
RAPGEF3-211ENST00000488250 GSDMAQ96QA5 445 aa18.18■□□□□ 0.5
RAPGEF3-211ENST00000488250 ERCC5P28715 1186 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 LMOD1P29536 600 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 PRPHP41219 470 aa18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 DPYDQ12882 1025 aa18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 ORC2Q13416 577 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 GRIPAP1Q4V328 841 aa18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 C17orf53Q8N3J3 647 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 CPVLQ9H3G5 476 aa18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 SMCO2A6NFE2 343 aa18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 CBFA2T2O43439 604 aa18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 BAG6P46379 1132 aa18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 KIAA0825Q8IV33 1275 aa18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 PIGSQ96S52 555 aa18.17■□□□□ 0.5
RAPGEF3-211ENST00000488250 TPM2P07951 284 aa18.16■□□□□ 0.5
RAPGEF3-211ENST00000488250 ZNF543Q08ER8 600 aa18.16■□□□□ 0.5
RAPGEF3-211ENST00000488250 INF2Q27J81 1249 aa18.16■□□□□ 0.5
RAPGEF3-211ENST00000488250 SOGA3Q5TF21 947 aa18.16■□□□□ 0.5
RAPGEF3-211ENST00000488250 PDXDC2PQ6P474 469 aa18.16■□□□□ 0.5
RAPGEF3-211ENST00000488250 ATP1A3P13637 1013 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 TXLNAP40222 546 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 NONOQ15233 471 aaKnown RBP eCLIP18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 PPP1R18Q6NYC8 613 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 DTHD1Q6ZMT9 781 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 HOMER1Q86YM7 354 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 LRRC47Q8N1G4 583 aaKnown RBP18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 PI4KBQ9UBF8 816 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 FAM198AQ9UFP1 575 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 R3HCC1Q9Y3T6 440 aaKnown RBP18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 SIPA1L1O43166 1804 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 ZNF18P17022 549 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 GPATCH4Q5T3I0 446 aaKnown RBP18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 FILIP1Q7Z7B0 1213 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 ZFPM1Q8IX07 1006 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 UBA5Q9GZZ9 404 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 FANCLQ9NW38 375 aa18.15■□□□□ 0.5
RAPGEF3-211ENST00000488250 COL2A1P02458 1487 aaPredicted RBP18.14■□□□□ 0.5
RAPGEF3-211ENST00000488250 AFMP43652 599 aa18.14■□□□□ 0.49
RAPGEF3-211ENST00000488250 AOC3Q16853 763 aa18.14■□□□□ 0.49
RAPGEF3-211ENST00000488250 MKL1Q969V6 931 aa18.14■□□□□ 0.49
RAPGEF3-211ENST00000488250 DNAJC18Q9H819 358 aa18.14■□□□□ 0.49
RAPGEF3-211ENST00000488250 FRMPD2Q68DX3 1309 aaPredicted RBP18.14■□□□□ 0.49
RAPGEF3-211ENST00000488250 FMR1Q06787 632 aaKnown RBP eCLIP18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 TATDN1Q6P1N9 297 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 CCDC150Q8NCX0 1101 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 CCSER1Q9C0I3 900 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 TMEM60Q9H2L4 133 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 VAT1LQ9HCJ6 419 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 ATRNL1Q5VV63 1379 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 PNMA6FA0A0J9YX94 578 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 GTPBP6O43824 516 aaPredicted RBP18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 UBASH3AP57075 661 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 CCZ1BP86790 482 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 CCZ1P86791 482 aaPredicted RBP18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 NEK8Q86SG6 692 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 REXO1Q8N1G1 1221 aaKnown RBP18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 MTMR8Q96EF0 704 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 AK8Q96MA6 479 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 NYAP2Q9P242 653 aa18.13■□□□□ 0.49
RAPGEF3-211ENST00000488250 ENTPD3O75355 529 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 SERPINC1P01008 464 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 EIF6P56537 245 aaKnown RBP18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 ARID5BQ14865 1188 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 SH3BP5LQ7L8J4 393 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 CLEC10AQ8IUN9 316 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 PRIMPOLQ96LW4 560 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 MED15Q96RN5 788 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 JMJD4Q9H9V9 463 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms