RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 MTA3Q9BTC8 594 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 HTTP42858 3142 aa12.92□□□□□ -0.34
UBE4B-210ENST00000488228 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 VWA5AO00534 786 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 DDAH1O94760 285 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 PARP1P09874 1014 aaKnown RBP12.91□□□□□ -0.34
UBE4B-210ENST00000488228 LIFRP42702 1097 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 ANAPC15P60006 121 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 FGD1P98174 961 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 TROAPQ12815 778 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 PLS1Q14651 629 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 TMEM132BQ14DG7 1078 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 ASPRV1Q53RT3 343 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 SYDE2Q5VT97 1194 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 CATIPQ7Z7H3 387 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 FAM160B2Q86V87 743 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 CCDC144CPQ8IYA2 1237 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 STAG2Q8N3U4 1231 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 REPS2Q8NFH8 660 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 GPRC5AQ8NFJ5 357 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 BRF1Q92994 677 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 PORCNQ9H237 461 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 ZSWIM6Q9HCJ5 1215 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 HOXC10Q9NYD6 342 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 PRR12Q9ULL5 1215 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 RABGAP1Q9Y3P9 1069 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 CYP46A1Q9Y6A2 500 aa12.91□□□□□ -0.34
UBE4B-210ENST00000488228 MCM3APO60318 1980 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 APOBRQ0VD83 1088 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 Q3C1V9 767 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 GPATCH4Q5T3I0 446 aaKnown RBP12.9□□□□□ -0.34
UBE4B-210ENST00000488228 CCDC174Q6PII3 467 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 APOA5Q6Q788 366 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 MB21D1Q8N884 522 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 PRPF38AQ8NAV1 312 aaKnown RBP12.9□□□□□ -0.34
UBE4B-210ENST00000488228 ERO1AQ96HE7 468 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 C22orf23Q9BZE7 217 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 TM6SF1Q9BZW5 370 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 MAD2L2Q9UI95 211 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
UBE4B-210ENST00000488228 NAP1L2Q9ULW6 460 aaPredicted RBP12.9□□□□□ -0.34
UBE4B-210ENST00000488228 ADAMTS5Q9UNA0 930 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 SLC12A7Q9Y666 1083 aa12.9□□□□□ -0.34
UBE4B-210ENST00000488228 LRRC37A2A6NM11 1700 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 DHX16O60231 1041 aaKnown RBP12.89□□□□□ -0.35
UBE4B-210ENST00000488228 PLA2G6O60733 806 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 PSMC4P43686 418 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 TOB2Q14106 344 aaPredicted RBP12.89□□□□□ -0.35
UBE4B-210ENST00000488228 SLC35G1Q2M3R5 365 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 SNRNP48Q6IEG0 339 aaKnown RBP12.89□□□□□ -0.35
UBE4B-210ENST00000488228 BTNL9Q6UXG8 535 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 CPXCR1Q8N123 301 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 CHURC1Q8WUH1 139 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 MOV10L1Q9BXT6 1211 aaKnown RBP12.89□□□□□ -0.35
UBE4B-210ENST00000488228 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 UBA5Q9GZZ9 404 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 SPATC1LQ9H0A9 340 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 EFCC1Q9HA90 598 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 SLC38A10Q9HBR0 1119 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
UBE4B-210ENST00000488228 PRDM10Q9NQV6 1147 aa12.89□□□□□ -0.35
UBE4B-210ENST00000488228 PALM3A6NDB9 673 aaPredicted RBP12.88□□□□□ -0.35
UBE4B-210ENST00000488228 TNPO2O14787 897 aaKnown RBP12.88□□□□□ -0.35
UBE4B-210ENST00000488228 ZBED4O75132 1171 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 PLEKHA8P1O95397 391 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 FMNL1O95466 1100 aaPredicted RBP12.88□□□□□ -0.35
UBE4B-210ENST00000488228 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 FCGRTP55899 365 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 KIF22Q14807 665 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 WDR78Q5VTH9 848 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 CTCFLQ8NI51 663 aaPredicted RBP12.88□□□□□ -0.35
UBE4B-210ENST00000488228 KIF2CQ99661 725 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
UBE4B-210ENST00000488228 TEX13BQ9BXU2 312 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 AGXT2Q9BYV1 514 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
UBE4B-210ENST00000488228 UPF2Q9HAU5 1272 aaKnown RBP12.88□□□□□ -0.35
UBE4B-210ENST00000488228 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 TRIM17Q9Y577 477 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 CTDP1Q9Y5B0 961 aaPredicted RBP12.88□□□□□ -0.35
UBE4B-210ENST00000488228 ZNF536O15090 1300 aa12.88□□□□□ -0.35
UBE4B-210ENST00000488228 NID2Q14112 1375 aa12.87□□□□□ -0.35
UBE4B-210ENST00000488228 GOLGA8AA7E2F4 631 aa12.87□□□□□ -0.35
UBE4B-210ENST00000488228 KLRF2D3W0D1 207 aa12.87□□□□□ -0.35
UBE4B-210ENST00000488228 ZBTB43O43298 467 aa12.87□□□□□ -0.35
UBE4B-210ENST00000488228 ERCC3P19447 782 aa12.87□□□□□ -0.35
UBE4B-210ENST00000488228 RBM25P49756 843 aaKnown RBP12.87□□□□□ -0.35
UBE4B-210ENST00000488228 CCNA1P78396 465 aa12.87□□□□□ -0.35
UBE4B-210ENST00000488228 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
UBE4B-210ENST00000488228 NOL8Q76FK4 1167 aaKnown RBP12.87□□□□□ -0.35
UBE4B-210ENST00000488228 OTOP1Q7RTM1 612 aa12.87□□□□□ -0.35
UBE4B-210ENST00000488228 CTU1Q7Z7A3 348 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms