RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CALM2P0DP24 149 aa18.36■□□□□ 0.53
C9orf3-219ENST00000488186 CALM3P0DP25 149 aa18.36■□□□□ 0.53
C9orf3-219ENST00000488186 FDX1P10109 184 aa18.36■□□□□ 0.53
C9orf3-219ENST00000488186 LACTBP83111 547 aaPredicted RBP18.36■□□□□ 0.53
C9orf3-219ENST00000488186 ZNF654Q8IZM8 581 aa18.36■□□□□ 0.53
C9orf3-219ENST00000488186 CTCFLQ8NI51 663 aaPredicted RBP18.36■□□□□ 0.53
C9orf3-219ENST00000488186 UPF3BQ9BZI7 483 aaKnown RBP18.36■□□□□ 0.53
C9orf3-219ENST00000488186 PDRG1Q9NUG6 133 aa18.36■□□□□ 0.53
C9orf3-219ENST00000488186 VWA5AO00534 786 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 DDAH1O94760 285 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 KIF5BP33176 963 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 SLC16A2P36021 539 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 PRMT2P55345 433 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 ERVK-9P63128 1117 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 ERVK-24P63145 666 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 COL9A3Q14050 684 aaPredicted RBP18.35■□□□□ 0.53
C9orf3-219ENST00000488186 SYDE2Q5VT97 1194 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 WDR78Q5VTH9 848 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 TTBK2Q6IQ55 1244 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 RASGRP2Q7LDG7 609 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 TNS4Q8IZW8 715 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 CD99L2Q8TCZ2 262 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 MORF4L1Q9UBU8 362 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 MGAMO43451 1857 aa18.35■□□□□ 0.53
C9orf3-219ENST00000488186 PSMC4P43686 418 aa18.34■□□□□ 0.53
C9orf3-219ENST00000488186 FCGRTP55899 365 aa18.34■□□□□ 0.53
C9orf3-219ENST00000488186 BRF1Q92994 677 aa18.34■□□□□ 0.53
C9orf3-219ENST00000488186 BACH2Q9BYV9 841 aa18.34■□□□□ 0.53
C9orf3-219ENST00000488186 UBA5Q9GZZ9 404 aa18.34■□□□□ 0.53
C9orf3-219ENST00000488186 TXNRD2Q9NNW7 524 aa18.34■□□□□ 0.53
C9orf3-219ENST00000488186 PRR12Q9ULL5 1215 aa18.34■□□□□ 0.53
C9orf3-219ENST00000488186 RLFQ13129 1914 aa18.33■□□□□ 0.53
C9orf3-219ENST00000488186 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 KLRF2D3W0D1 207 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 ZBTB43O43298 467 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 PEX10O60683 326 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 HOXD10P28358 340 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 GRM4Q14833 912 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 Q3C1V9 767 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 BTNL9Q6UXG8 535 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 SGMS1Q86VZ5 419 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 CPXCR1Q8N123 301 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 MYL10Q9BUA6 226 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 SPATC1LQ9H0A9 340 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 EFCC1Q9HA90 598 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 VAT1LQ9HCJ6 419 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 BTBD7Q9P203 1132 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 ADAMTS5Q9UNA0 930 aa18.33■□□□□ 0.52
C9orf3-219ENST00000488186 TNPO2O14787 897 aaKnown RBP18.32■□□□□ 0.52
C9orf3-219ENST00000488186 CNMDO75829 334 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 MAPK4P31152 587 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 STAT3P40763 770 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 GNAQP50148 359 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 TROAPQ12815 778 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 CCDC174Q6PII3 467 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 FBXO46Q6PJ61 603 aaPredicted RBP18.32■□□□□ 0.52
C9orf3-219ENST00000488186 OTOP1Q7RTM1 612 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 MICU3Q86XE3 530 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 RAB11FIP4Q86YS3 637 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 CCDC144CPQ8IYA2 1237 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 COA7Q96BR5 231 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 MAP3K14Q99558 947 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 SLC38A10Q9HBR0 1119 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 DOCK3Q8IZD9 2030 aa18.32■□□□□ 0.52
C9orf3-219ENST00000488186 PARP14Q460N5 1801 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 SLC25A27O95847 323 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 NEK4P51957 841 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 SNAP25P60880 206 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 TMEM132BQ14DG7 1078 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 NCAPG2Q86XI2 1143 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 STAG2Q8N3U4 1231 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 FANCBQ8NB91 859 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 MCOLN1Q9GZU1 580 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 RAVER2Q9HCJ3 691 aaKnown RBP18.31■□□□□ 0.52
C9orf3-219ENST00000488186 IVNS1ABPQ9Y6Y0 642 aa18.31■□□□□ 0.52
C9orf3-219ENST00000488186 PALM3A6NDB9 673 aaPredicted RBP18.3■□□□□ 0.52
C9orf3-219ENST00000488186 GOLGA8AA7E2F4 631 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 GOLGA8BA8MQT2 603 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 RXRAP19793 462 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 COPB2P35606 906 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 RBM25P49756 843 aaKnown RBP18.3■□□□□ 0.52
C9orf3-219ENST00000488186 ANKRD1Q15327 319 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 SNRNP48Q6IEG0 339 aaKnown RBP18.3■□□□□ 0.52
C9orf3-219ENST00000488186 APOA5Q6Q788 366 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 FBXL16Q8N461 479 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 LZTS2Q9BRK4 669 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 MOV10L1Q9BXT6 1211 aaKnown RBP18.3■□□□□ 0.52
C9orf3-219ENST00000488186 TEX13BQ9BXU2 312 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 CPVLQ9H3G5 476 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 BRPF3Q9ULD4 1205 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 TRIM17Q9Y577 477 aa18.3■□□□□ 0.52
C9orf3-219ENST00000488186 METAP2P50579 478 aaKnown RBP eCLIP18.29■□□□□ 0.52
C9orf3-219ENST00000488186 OAZ1P54368 228 aa18.29■□□□□ 0.52
C9orf3-219ENST00000488186 RTN1Q16799 776 aa18.29■□□□□ 0.52
C9orf3-219ENST00000488186 POTEEQ6S8J3 1075 aa18.29■□□□□ 0.52
C9orf3-219ENST00000488186 PLEKHH3Q7Z736 793 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms