RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 NAP1L4Q99733 375 aaKnown RBP13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 ARHGEF35A5YM69 484 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 AFAP1L1Q8TED9 768 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 FBF1Q8TES7 1133 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 PGBD1Q96JS3 809 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 DHX36Q9H2U1 1008 aaKnown RBP13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 PPLO60437 1756 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 TRAF5O00463 557 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 ZNF202O95125 648 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 SPAG1Q07617 926 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 HAUS3Q68CZ6 603 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 CPVLQ9H3G5 476 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 RABEP2Q9H5N1 569 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 SCAF8Q9UPN6 1271 aaKnown RBP13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 MTMR6Q9Y217 621 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 IQGAP1P46940 1657 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 LRMPQ12912 555 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 NECTIN1Q15223 517 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 SF3B3Q15393 1217 aaKnown RBP13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 ERCC6LQ2NKX8 1250 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 DPH6Q7L8W6 267 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 TPH2Q8IWU9 490 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 SWAP70Q9UH65 585 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 ARHGAP23Q9P227 1491 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 SLIT1O75093 1534 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
LDLRAP1-207ENST00000488127 A0A1B0GUA9 196 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 NDUFAB1O14561 156 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 BRD1O95696 1058 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 HERC4Q5GLZ8 1057 aaPredicted RBP13□□□□□ -0.33
LDLRAP1-207ENST00000488127 CCDC65Q8IXS2 484 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 AIFM3Q96NN9 605 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 MXD3Q9BW11 206 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 KRT86O43790 486 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 CUTAO60888 179 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 TACC1O75410 805 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 DESP17661 470 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 INPP5BP32019 993 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 SNAP25P60880 206 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 ARHGEF16Q5VV41 709 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 COL23A1Q86Y22 540 aaPredicted RBP13□□□□□ -0.33
LDLRAP1-207ENST00000488127 COA7Q96BR5 231 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 GAS7O60861 476 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 DDAH1O94760 285 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 LARGE1O95461 756 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 TECP42680 631 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 DCAF17Q5H9S7 520 aaPredicted RBP13□□□□□ -0.33
LDLRAP1-207ENST00000488127 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 NLRX1Q86UT6 975 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 ARFGAP2Q8N6H7 521 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 TTC16Q8NEE8 873 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 FBXO18Q8NFZ0 1043 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 GLG1Q92896 1179 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 BLZF1Q9H2G9 400 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 KIAA1210Q9ULL0 1709 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 PCP11498 1178 aaKnown RBP13□□□□□ -0.33
LDLRAP1-207ENST00000488127 PIGSQ96S52 555 aa13□□□□□ -0.33
LDLRAP1-207ENST00000488127 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 POLR2MP0CAP2 368 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 MYL5Q02045 173 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 KIF5AQ12840 1032 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 CCDC6Q16204 474 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 NMT2O60551 498 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 NCBP1Q09161 790 aaKnown RBP12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 MRPL11Q9Y3B7 192 aaKnown RBP12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 BMP3P12645 472 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 CABP7Q86V35 215 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 TBC1D10CQ8IV04 446 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 CTNNBL1Q8WYA6 563 aaPredicted RBP12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 AMNQ9BXJ7 453 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 CLSTN2Q9H4D0 955 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 AZI2Q9H6S1 392 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 DCP1AQ9NPI6 582 aaPredicted RBP12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
LDLRAP1-207ENST00000488127 VAV2P52735 878 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 BRDTQ58F21 947 aaPredicted RBP12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 GPATCH4Q5T3I0 446 aaKnown RBP12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 RTEL1Q9NZ71 1219 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 DNM3Q9UQ16 869 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 CSF1RP07333 972 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 RSRC1Q96IZ7 334 aaKnown RBP12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 CLIC6Q96NY7 704 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 GYS1P13807 737 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 CNGA1P29973 690 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 CETN2P41208 172 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 CFAP58Q5T655 872 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 USP37Q86T82 979 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 ANKS4BQ8N8V4 417 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 NSUN7Q8NE18 718 aaKnown RBP12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 GJB4Q9NTQ9 266 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 MRVI1Q9Y6F6 885 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 DPEP1P16444 411 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 CYP4A11Q02928 519 aa12.98□□□□□ -0.33
LDLRAP1-207ENST00000488127 NR5A1Q13285 461 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms