RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 USP6NLQ92738 828 aa8.97□□□□□ -0.97
SCAP-212ENST00000487942 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.97□□□□□ -0.97
SCAP-212ENST00000487942 SWAP70Q9UH65 585 aa8.97□□□□□ -0.97
SCAP-212ENST00000487942 RNF113AO15541 343 aaKnown RBP8.96□□□□□ -0.98
SCAP-212ENST00000487942 FARP2O94887 1054 aaPredicted RBP8.96□□□□□ -0.98
SCAP-212ENST00000487942 TFRCP02786 760 aaKnown RBP8.96□□□□□ -0.98
SCAP-212ENST00000487942 HMGCRP04035 888 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 MAPK4P31152 587 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 USP14P54578 494 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 MORN1Q5T089 497 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 ZSCAN25Q6NSZ9 544 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 TMEM179Q6ZVK1 233 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 C16orf86Q6ZW13 317 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 APPBP2Q92624 585 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 SEC62Q99442 399 aaKnown RBP8.96□□□□□ -0.98
SCAP-212ENST00000487942 NUDT12Q9BQG2 462 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.96□□□□□ -0.98
SCAP-212ENST00000487942 EPB41L4AQ9HCS5 686 aaPredicted RBP8.96□□□□□ -0.98
SCAP-212ENST00000487942 FLRT1Q9NZU1 646 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 RABGAP1Q9Y3P9 1069 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 SALL3Q9BXA9 1300 aa8.96□□□□□ -0.98
SCAP-212ENST00000487942 GPAA1O43292 621 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 RNF40O75150 1001 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 EEF2P13639 858 aaKnown RBP8.95□□□□□ -0.98
SCAP-212ENST00000487942 KCNC4Q03721 635 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 ICA1Q05084 483 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 LBX2Q6XYB7 198 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 PLEKHH3Q7Z736 793 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 DPF3Q92784 378 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 GPATCH3Q96I76 525 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 TANGO6Q9C0B7 1094 aa8.95□□□□□ -0.98
SCAP-212ENST00000487942 LAMA4Q16363 1823 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 LCTP09848 1927 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 MYH6P13533 1939 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 MINDY4BA8MYZ0 360 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 XRCC5P13010 732 aaKnown RBP8.94□□□□□ -0.98
SCAP-212ENST00000487942 MX1P20591 662 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 RASA1P20936 1047 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 CCND3P30281 292 aaPredicted RBP8.94□□□□□ -0.98
SCAP-212ENST00000487942 ATP2B2Q01814 1243 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 CACNB2Q08289 660 aaPredicted RBP8.94□□□□□ -0.98
SCAP-212ENST00000487942 MAP2K5Q13163 448 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 COG2Q14746 738 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 HABP4Q5JVS0 413 aaKnown RBP8.94□□□□□ -0.98
SCAP-212ENST00000487942 MAP3K21Q5TCX8 1036 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 CCAR1Q8IX12 1150 aaKnown RBP8.94□□□□□ -0.98
SCAP-212ENST00000487942 NPLOC4Q8TAT6 608 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 GTF3C2Q8WUA4 911 aaPredicted RBP8.94□□□□□ -0.98
SCAP-212ENST00000487942 SOCS4Q8WXH5 440 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 ATG4CQ96DT6 458 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 PAWRQ96IZ0 340 aaKnown RBP8.94□□□□□ -0.98
SCAP-212ENST00000487942 CCDC17Q96LX7 622 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 VCPKMTQ9H867 229 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 ARHGEF10LQ9HCE6 1279 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 HMX1Q9NP08 348 aaPredicted RBP8.94□□□□□ -0.98
SCAP-212ENST00000487942 FBXO28Q9NVF7 368 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 ARPP21Q9UBL0 812 aaPredicted RBP8.94□□□□□ -0.98
SCAP-212ENST00000487942 TMX2Q9Y320 296 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 TTC41PQ6P2S7 1318 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 RPTORQ8N122 1335 aa8.94□□□□□ -0.98
SCAP-212ENST00000487942 PRDM1O75626 825 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 FLOT1O75955 427 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 ZKSCAN1P17029 563 aaPredicted RBP8.93□□□□□ -0.98
SCAP-212ENST00000487942 RGS2P41220 211 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 PTGDRQ13258 359 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 SBK1Q52WX2 424 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 SWT1Q5T5J6 900 aaKnown RBP8.93□□□□□ -0.98
SCAP-212ENST00000487942 ANKRD45Q5TZF3 282 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 CCDC129Q6ZRS4 1044 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 AMOTL1Q8IY63 956 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 IFNL3Q8IZI9 196 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 DDRGK1Q96HY6 314 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 APBA2Q99767 749 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 FSD1Q9BTV5 496 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 MOV10L1Q9BXT6 1211 aaKnown RBP8.93□□□□□ -0.98
SCAP-212ENST00000487942 CWC22Q9HCG8 908 aaKnown RBP8.93□□□□□ -0.98
SCAP-212ENST00000487942 ROBO3Q96MS0 1386 aa8.93□□□□□ -0.98
SCAP-212ENST00000487942 SLC15A5A6NIM6 579 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 ERC2O15083 957 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 FOXP2O15409 715 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 RAD21O60216 631 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 GLRX3O76003 335 aaKnown RBP8.92□□□□□ -0.98
SCAP-212ENST00000487942 APPP05067 770 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 ZFYP08048 801 aaPredicted RBP8.92□□□□□ -0.98
SCAP-212ENST00000487942 ERCC3P19447 782 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 TDO2P48775 406 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 CCNA1P78396 465 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 GRB14Q14449 540 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 PLS1Q14651 629 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 ZMYM1Q5SVZ6 1142 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 FAM83BQ5T0W9 1011 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 GIMAP6Q6P9H5 292 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 TRPV1Q8NER1 839 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 LPAR1Q92633 364 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 NUP88Q99567 741 aaPredicted RBP8.92□□□□□ -0.98
SCAP-212ENST00000487942 SPATC1LQ9H0A9 340 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 KANSL2Q9H9L4 492 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 HOXC10Q9NYD6 342 aa8.92□□□□□ -0.98
SCAP-212ENST00000487942 TACC3Q9Y6A5 838 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms