RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 HHIPL1Q96JK4 782 aa7.03□□□□□ -1.28
CCDC66-221ENST00000487739 FCRL2Q96LA5 508 aaPredicted RBP7.03□□□□□ -1.28
CCDC66-221ENST00000487739 KRTAP4-2Q9BYR5 136 aa7.03□□□□□ -1.28
CCDC66-221ENST00000487739 CRTAC1Q9NQ79 661 aa7.03□□□□□ -1.28
CCDC66-221ENST00000487739 FBXL21Q9UKT6 434 aa7.03□□□□□ -1.28
CCDC66-221ENST00000487739 ADGRF1Q5T601 910 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 LDLRAD1Q5T700 205 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 LCE4AQ5TA78 99 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 USP48Q86UV5 1035 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 AMIGO3Q86WK7 504 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 SIRT2Q8IXJ6 389 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 DHRS1Q96LJ7 313 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 SLC9A7Q96T83 725 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 METTL5Q9NRN9 209 aaKnown RBP7.02□□□□□ -1.29
CCDC66-221ENST00000487739 GFOD1Q9NXC2 390 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 PRR13Q9NZ81 148 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 ZNRF3Q9ULT6 936 aa7.02□□□□□ -1.29
CCDC66-221ENST00000487739 AUHQ13825 339 aaKnown RBP7.01□□□□□ -1.29
CCDC66-221ENST00000487739 INTS3Q68E01 1043 aaKnown RBP7.01□□□□□ -1.29
CCDC66-221ENST00000487739 ZPBP2Q6X784 338 aa7.01□□□□□ -1.29
CCDC66-221ENST00000487739 TNFRSF10DQ9UBN6 386 aa7.01□□□□□ -1.29
CCDC66-221ENST00000487739 SUCOQ9UBS9 1254 aaKnown RBP7.01□□□□□ -1.29
CCDC66-221ENST00000487739 MINPP1Q9UNW1 487 aa7.01□□□□□ -1.29
CCDC66-221ENST00000487739 ZBTB7CA1YPR0 619 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 HRKO00198 91 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 MEIS1O00470 390 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 EFEMP2O95967 443 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 BMP8BP34820 402 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 RTP1P59025 263 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 FANCCQ00597 558 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 FERD3LQ96RJ6 166 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 BACH2Q9BYV9 841 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 TAF6LQ9Y6J9 622 aa7□□□□□ -1.29
CCDC66-221ENST00000487739 ZNF205O95201 554 aa6.99□□□□□ -1.29
CCDC66-221ENST00000487739 PNLIPP16233 465 aa6.99□□□□□ -1.29
CCDC66-221ENST00000487739 GALNT18Q6P9A2 607 aa6.99□□□□□ -1.29
CCDC66-221ENST00000487739 TAB3Q8N5C8 712 aaPredicted RBP6.99□□□□□ -1.29
CCDC66-221ENST00000487739 DSCC1Q9BVC3 393 aa6.99□□□□□ -1.29
CCDC66-221ENST00000487739 CDADC1Q9BWV3 514 aa6.99□□□□□ -1.29
CCDC66-221ENST00000487739 GPR55Q9Y2T6 319 aaPredicted RBP6.99□□□□□ -1.29
CCDC66-221ENST00000487739 FAM86C2PA6NEL3 165 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 WTIPA6NIX2 430 aaPredicted RBP6.98□□□□□ -1.29
CCDC66-221ENST00000487739 FADS2P1A8MWK0 482 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 ACRP10323 421 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 CTSKP43235 329 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 SRSF3P84103 164 aaKnown RBP6.98□□□□□ -1.29
CCDC66-221ENST00000487739 ZNF394Q53GI3 561 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 OLFML2BQ68BL8 750 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 CRTC3Q6UUV7 619 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 CCDC144CPQ8IYA2 1237 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 C7orf61Q8IZ16 206 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 SMARCC1Q92922 1105 aaPredicted RBP6.98□□□□□ -1.29
CCDC66-221ENST00000487739 TM9SF2Q99805 663 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 PLCD4Q9BRC7 762 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 IRF2BPLQ9H1B7 796 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 GCM1Q9NP62 436 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 ERVK13-1Q9NX77 482 aa6.98□□□□□ -1.29
CCDC66-221ENST00000487739 CNOT6Q9ULM6 557 aaKnown RBP6.98□□□□□ -1.29
CCDC66-221ENST00000487739 RFXAPO00287 272 aa6.97□□□□□ -1.29
CCDC66-221ENST00000487739 GSNP06396 782 aa6.97□□□□□ -1.29
CCDC66-221ENST00000487739 ARL4AP40617 200 aa6.97□□□□□ -1.29
CCDC66-221ENST00000487739 PMS1P54277 932 aaKnown RBP6.97□□□□□ -1.29
CCDC66-221ENST00000487739 HSF5Q4G112 596 aaPredicted RBP6.97□□□□□ -1.29
CCDC66-221ENST00000487739 RNF34Q969K3 372 aa6.97□□□□□ -1.29
CCDC66-221ENST00000487739 SGPP1Q9BX95 441 aa6.97□□□□□ -1.29
CCDC66-221ENST00000487739 KRTAP4-9Q9BYQ8 210 aa6.97□□□□□ -1.29
CCDC66-221ENST00000487739 SIRT5Q9NXA8 310 aa6.97□□□□□ -1.29
CCDC66-221ENST00000487739 PCDHGB7Q9Y5F8 929 aa6.97□□□□□ -1.29
CCDC66-221ENST00000487739 C9IYK1 514 aa6.96□□□□□ -1.3
CCDC66-221ENST00000487739 ABLIM1O14639 778 aa6.96□□□□□ -1.3
CCDC66-221ENST00000487739 VAV1P15498 845 aa6.96□□□□□ -1.3
CCDC66-221ENST00000487739 LAPTM5Q13571 262 aa6.96□□□□□ -1.3
CCDC66-221ENST00000487739 ZNF385BQ569K4 471 aa6.96□□□□□ -1.3
CCDC66-221ENST00000487739 FBXW10Q5XX13 1052 aa6.96□□□□□ -1.3
CCDC66-221ENST00000487739 RAPGEFL1Q9UHV5 662 aa6.96□□□□□ -1.3
CCDC66-221ENST00000487739 MBD1Q9UIS9 605 aaPredicted RBP6.96□□□□□ -1.3
CCDC66-221ENST00000487739 KCTD3Q9Y597 815 aa6.96□□□□□ -1.3
CCDC66-221ENST00000487739 A0A1W2PQ45 241 aaPredicted RBP6.95□□□□□ -1.3
CCDC66-221ENST00000487739 A0A1W2PQY0 241 aa6.95□□□□□ -1.3
CCDC66-221ENST00000487739 SHOXO15266 292 aa6.95□□□□□ -1.3
CCDC66-221ENST00000487739 MFAP1P55081 439 aaKnown RBP6.95□□□□□ -1.3
CCDC66-221ENST00000487739 ERVFRD-1P60508 538 aa6.95□□□□□ -1.3
CCDC66-221ENST00000487739 TDRD10Q5VZ19 366 aaKnown RBP6.95□□□□□ -1.3
CCDC66-221ENST00000487739 CWF19L1Q69YN2 538 aaKnown RBP6.95□□□□□ -1.3
CCDC66-221ENST00000487739 TTLL10Q6ZVT0 673 aa6.95□□□□□ -1.3
CCDC66-221ENST00000487739 SLCO6A1Q86UG4 719 aa6.95□□□□□ -1.3
CCDC66-221ENST00000487739 RBBP8NLQ8NC74 664 aaPredicted RBP6.95□□□□□ -1.3
CCDC66-221ENST00000487739 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
CCDC66-221ENST00000487739 MPOP05164 745 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 SDHBP21912 280 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 GUCY2CP25092 1073 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 VIPR1P32241 457 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 YBX1P67809 324 aaKnown RBP6.94□□□□□ -1.3
CCDC66-221ENST00000487739 TMEM62Q0P6H9 643 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 PPFIBP1Q86W92 1011 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 NAT16Q8N8M0 369 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 NUP43Q8NFH3 380 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 SIGLEC10Q96LC7 697 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 PPT2Q9UMR5 302 aa6.94□□□□□ -1.3
CCDC66-221ENST00000487739 IRAK3Q9Y616 596 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms