RNA–Protein interactions for RNA: ENST00000487543.2

SPATA6-208, Transcript of spermatogenesis associated 6, humanhuman

TSL 5

Gene SPATA6, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA6-208ENST00000487543 PTPRFP10586 1907 aa11.95□□□□□ -0.5
SPATA6-208ENST00000487543 CCL15-CCL14A0A0B4J2E2 113 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 PTPDC1A2A3K4 754 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 SNHG28P0DPA3 235 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 GTF2A2P52657 109 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 HMGCS2P54868 508 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 HMGN5P82970 282 aaKnown RBP11.94□□□□□ -0.5
SPATA6-208ENST00000487543 CUL4AQ13619 759 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 CCL15Q16663 113 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 FAM83BQ5T0W9 1011 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 KCTD1Q719H9 257 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 RASGRP2Q7LDG7 609 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 OTOP1Q7RTM1 612 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 CD99L2Q8TCZ2 262 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 INTS4Q96HW7 963 aaKnown RBP11.94□□□□□ -0.5
SPATA6-208ENST00000487543 TANGO6Q9C0B7 1094 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 GPCPD1Q9NPB8 672 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 RBM27Q9P2N5 1060 aaKnown RBP11.94□□□□□ -0.5
SPATA6-208ENST00000487543 LOC285556D6RIA3 1793 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 MYH6P13533 1939 aa11.94□□□□□ -0.5
SPATA6-208ENST00000487543 CENPFP49454 3210 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 PALM3A6NDB9 673 aaPredicted RBP11.93□□□□□ -0.5
SPATA6-208ENST00000487543 KLRF2D3W0D1 207 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 CXCL11O14625 94 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 IRF6O14896 467 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 VCAM1P19320 739 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 CDC27P30260 824 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 ADD1P35611 737 aaKnown RBP11.93□□□□□ -0.5
SPATA6-208ENST00000487543 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 STAT2P52630 851 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 CAP1Q01518 475 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 SP3Q02447 781 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
SPATA6-208ENST00000487543 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 GADL1Q6ZQY3 521 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 FAM43AQ8N2R8 423 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 WASF1Q92558 559 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 NUP88Q99567 741 aaPredicted RBP11.93□□□□□ -0.5
SPATA6-208ENST00000487543 SLC26A6Q9BXS9 759 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 SEC63Q9UGP8 760 aaKnown RBP11.93□□□□□ -0.5
SPATA6-208ENST00000487543 MAD2L2Q9UI95 211 aa11.93□□□□□ -0.5
SPATA6-208ENST00000487543 STK36Q9NRP7 1315 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 HTTP42858 3142 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 TMEM232C9JQI7 657 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 PLEKHA8P1O95397 391 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 IFNAR1P17181 557 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 ST3GAL1Q11201 340 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 PABPC4Q13310 644 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 TAF1CQ15572 869 aaPredicted RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 FASTKD5Q7L8L6 764 aaKnown RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 CMTR1Q8N1G2 835 aaKnown RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 STAG2Q8N3U4 1231 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 CCDC82Q8N4S0 544 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 PROCA1Q8NCQ7 364 aaPredicted RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 NSUN7Q8NE18 718 aaKnown RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 RRP36Q96EU6 259 aaKnown RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 DDX11Q96FC9 970 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 ERO1AQ96HE7 468 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 C12orf42Q96LP6 360 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 RNF26Q9BY78 433 aaPredicted RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 RPAP3Q9H6T3 665 aaPredicted RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 EMILIN3Q9NT22 766 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
SPATA6-208ENST00000487543 FEM1BQ9UK73 627 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 KCNH4Q9UQ05 1017 aa11.92□□□□□ -0.5
SPATA6-208ENST00000487543 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 BRCA2P51587 3418 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
SPATA6-208ENST00000487543 JAK2O60674 1132 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 FLOT1O75955 427 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 DEXIO95424 95 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 FMNL1O95466 1100 aaPredicted RBP11.91□□□□□ -0.5
SPATA6-208ENST00000487543 CETPP11597 493 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 SMARCA1P28370 1054 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 SLC16A2P36021 539 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 TRIM29Q14134 588 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 SH3D19Q5HYK7 790 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 SYDE2Q5VT97 1194 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
SPATA6-208ENST00000487543 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 PHKBQ93100 1093 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 SLF1Q9BQI6 1058 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 SPZ1Q9BXG8 430 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 EFCC1Q9HA90 598 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
SPATA6-208ENST00000487543 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
SPATA6-208ENST00000487543 PTPN22Q9Y2R2 807 aa11.91□□□□□ -0.5
SPATA6-208ENST00000487543 CTDP1Q9Y5B0 961 aaPredicted RBP11.91□□□□□ -0.5
SPATA6-208ENST00000487543 TNRC18O15417 2968 aaPredicted RBP11.91□□□□□ -0.5
SPATA6-208ENST00000487543 USP17L15C9J2P7 530 aa11.9□□□□□ -0.5
SPATA6-208ENST00000487543 BTBD19C9JJ37 291 aa11.9□□□□□ -0.5
SPATA6-208ENST00000487543 USP17L13C9JLJ4 530 aa11.9□□□□□ -0.5
SPATA6-208ENST00000487543 USP17L11C9JVI0 530 aa11.9□□□□□ -0.5
SPATA6-208ENST00000487543 USP17L18D6R9N7 530 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms