RNA–Protein interactions for RNA: ENST00000487455.1

REPIN1-212, Transcript of replication initiator 1, humanhuman

TSL 4

Gene REPIN1, Length 464 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-212ENST00000487455 CCSAPQ6IQ19 270 aaPredicted RBP11.31□□□□□ -0.6
REPIN1-212ENST00000487455 DYNLL2Q96FJ2 89 aa11.31□□□□□ -0.6
REPIN1-212ENST00000487455 CRNKL1Q9BZJ0 848 aaKnown RBP11.31□□□□□ -0.6
REPIN1-212ENST00000487455 SH2D4AQ9H788 454 aa11.31□□□□□ -0.6
REPIN1-212ENST00000487455 SLC28A3Q9HAS3 691 aa11.31□□□□□ -0.6
REPIN1-212ENST00000487455 YBX2Q9Y2T7 364 aaKnown RBP11.31□□□□□ -0.6
REPIN1-212ENST00000487455 TMX2Q9Y320 296 aa11.31□□□□□ -0.6
REPIN1-212ENST00000487455 ARVCFO00192 962 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 SNAI1O95863 264 aaPredicted RBP11.3□□□□□ -0.6
REPIN1-212ENST00000487455 ASGR1P07306 291 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 C6orf222P0C671 652 aaPredicted RBP11.3□□□□□ -0.6
REPIN1-212ENST00000487455 TRIM27P14373 513 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 KCNQ1P51787 676 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 SSH3Q8TE77 659 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 SDR42E1Q8WUS8 393 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 HERVK_113Q902F9 699 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 CLUAP1Q96AJ1 413 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 EAF2Q96CJ1 260 aaPredicted RBP11.3□□□□□ -0.6
REPIN1-212ENST00000487455 IL23AQ9NPF7 189 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 ADAMTS5Q9UNA0 930 aa11.3□□□□□ -0.6
REPIN1-212ENST00000487455 A0A0U1RQG5 324 aaPredicted RBP11.29□□□□□ -0.6
REPIN1-212ENST00000487455 VWA5AO00534 786 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 ADCY6O43306 1168 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 RAD21O60216 631 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
REPIN1-212ENST00000487455 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
REPIN1-212ENST00000487455 RABGGTBP53611 331 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 SKIV2LQ15477 1246 aaKnown RBP11.29□□□□□ -0.6
REPIN1-212ENST00000487455 FAM126BQ8IXS8 530 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 PCSK9Q8NBP7 692 aaKnown RBP11.29□□□□□ -0.6
REPIN1-212ENST00000487455 REPS2Q8NFH8 660 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 LRFN3Q9BTN0 628 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 MTIF3Q9H2K0 278 aaKnown RBP11.29□□□□□ -0.6
REPIN1-212ENST00000487455 EPHX3Q9H6B9 360 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 DCP1AQ9NPI6 582 aaPredicted RBP11.29□□□□□ -0.6
REPIN1-212ENST00000487455 ZNF214Q9UL59 606 aaPredicted RBP11.29□□□□□ -0.6
REPIN1-212ENST00000487455 PPP1R9AQ9ULJ8 1098 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 SYNGAP1Q96PV0 1343 aa11.29□□□□□ -0.6
REPIN1-212ENST00000487455 BAZ2AQ9UIF9 1905 aaKnown RBP11.29□□□□□ -0.6
REPIN1-212ENST00000487455 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
REPIN1-212ENST00000487455 TLR3O15455 904 aaKnown RBP11.28□□□□□ -0.6
REPIN1-212ENST00000487455 FGBP02675 491 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 MYOGP15173 224 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 PDE6AP16499 860 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 COPB2P35606 906 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 ATP8B2P98198 1209 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 AAK1Q2M2I8 961 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 GNASQ5JWF2 1037 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 FAM83BQ5T0W9 1011 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 PPP2R2DQ66LE6 453 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 TMED8Q6PL24 325 aaPredicted RBP11.28□□□□□ -0.6
REPIN1-212ENST00000487455 OTOP2Q7RTS6 562 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
REPIN1-212ENST00000487455 FRAT1Q92837 279 aaPredicted RBP11.28□□□□□ -0.6
REPIN1-212ENST00000487455 DDX11Q96FC9 970 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 SPC25Q9HBM1 224 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 SWAP70Q9UH65 585 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 HCN4Q9Y3Q4 1203 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
REPIN1-212ENST00000487455 SMIM22K7EJ46 135 aa11.27□□□□□ -0.61
REPIN1-212ENST00000487455 EEF2P13639 858 aaKnown RBP11.27□□□□□ -0.61
REPIN1-212ENST00000487455 SLC4A3P48751 1232 aa11.27□□□□□ -0.61
REPIN1-212ENST00000487455 ACVR2BQ13705 512 aa11.27□□□□□ -0.61
REPIN1-212ENST00000487455 CCDC144BQ3MJ40 725 aa11.27□□□□□ -0.61
REPIN1-212ENST00000487455 SLC9C2Q5TAH2 1124 aa11.27□□□□□ -0.61
REPIN1-212ENST00000487455 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.61
REPIN1-212ENST00000487455 MAMDC4Q6UXC1 1216 aa11.27□□□□□ -0.61
REPIN1-212ENST00000487455 LCORLQ8N3X6 602 aa11.27□□□□□ -0.61
REPIN1-212ENST00000487455 UPF3AQ9H1J1 476 aaKnown RBP11.27□□□□□ -0.61
REPIN1-212ENST00000487455 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.27□□□□□ -0.61
REPIN1-212ENST00000487455 NOP58Q9Y2X3 529 aaKnown RBP11.27□□□□□ -0.61
REPIN1-212ENST00000487455 DNAJC25-GNG10A0A024R161 153 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 CYP2D7A0A087X1C5 515 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 ERC2O15083 957 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 CD4P01730 458 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 CCL23P55773 120 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 GJA9P57773 515 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 BEX3Q00994 111 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 TMEM31Q5JXX7 168 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 AACSQ86V21 672 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 TMEM57Q8N5G2 664 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 CCDC17Q96LX7 622 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
REPIN1-212ENST00000487455 TEX13BQ9BXU2 312 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 HIPK3Q9H422 1215 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 ARMT1Q9H993 441 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
REPIN1-212ENST00000487455 RIPK3Q9Y572 518 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 SLC4A7Q9Y6M7 1214 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 ZNF532Q9HCE3 1301 aa11.26□□□□□ -0.61
REPIN1-212ENST00000487455 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
REPIN1-212ENST00000487455 RFXAPO00287 272 aa11.25□□□□□ -0.61
REPIN1-212ENST00000487455 CTAGE5O15320 804 aa11.25□□□□□ -0.61
REPIN1-212ENST00000487455 PRKAB2O43741 272 aa11.25□□□□□ -0.61
REPIN1-212ENST00000487455 CDK8P49336 464 aa11.25□□□□□ -0.61
REPIN1-212ENST00000487455 TTF1Q15361 905 aaPredicted RBP11.25□□□□□ -0.61
REPIN1-212ENST00000487455 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
REPIN1-212ENST00000487455 SLF1Q9BQI6 1058 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms