RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.4■□□□□ 0.7
SRRT-212ENST00000487311 SLF1Q9BQI6 1058 aa19.4■□□□□ 0.7
SRRT-212ENST00000487311 ECHDC1Q9NTX5 307 aa19.4■□□□□ 0.7
SRRT-212ENST00000487311 CLIP2Q9UDT6 1046 aa19.4■□□□□ 0.7
SRRT-212ENST00000487311 RCAN3Q9UKA8 241 aa19.4■□□□□ 0.7
SRRT-212ENST00000487311 TACC3Q9Y6A5 838 aa19.4■□□□□ 0.7
SRRT-212ENST00000487311 GREB1LQ9C091 1923 aaPredicted RBP19.39■□□□□ 0.7
SRRT-212ENST00000487311 DNAJC25-GNG10A0A024R161 153 aa19.39■□□□□ 0.69
SRRT-212ENST00000487311 IGKV6D-41A0A0C4DH26 115 aa19.39■□□□□ 0.69
SRRT-212ENST00000487311 CLTBP09497 229 aa19.39■□□□□ 0.69
SRRT-212ENST00000487311 AKR1A1P14550 325 aa19.39■□□□□ 0.69
SRRT-212ENST00000487311 SLC4A3P48751 1232 aa19.39■□□□□ 0.69
SRRT-212ENST00000487311 SNRNP48Q6IEG0 339 aaKnown RBP19.39■□□□□ 0.69
SRRT-212ENST00000487311 KBTBD3Q8NAB2 608 aa19.39■□□□□ 0.69
SRRT-212ENST00000487311 MKNK2Q9HBH9 465 aa19.39■□□□□ 0.69
SRRT-212ENST00000487311 EPB41L4AQ9HCS5 686 aaPredicted RBP19.39■□□□□ 0.69
SRRT-212ENST00000487311 MYADML2A6NDP7 307 aa19.38■□□□□ 0.69
SRRT-212ENST00000487311 KIAA0355O15063 1070 aa19.38■□□□□ 0.69
SRRT-212ENST00000487311 PQBP1O60828 265 aaKnown RBP19.38■□□□□ 0.69
SRRT-212ENST00000487311 FAAP100Q0VG06 881 aa19.38■□□□□ 0.69
SRRT-212ENST00000487311 CCSAPQ6IQ19 270 aaPredicted RBP19.38■□□□□ 0.69
SRRT-212ENST00000487311 GIMAP6Q6P9H5 292 aa19.38■□□□□ 0.69
SRRT-212ENST00000487311 CPXCR1Q8N123 301 aa19.38■□□□□ 0.69
SRRT-212ENST00000487311 PRPF38AQ8NAV1 312 aaKnown RBP19.38■□□□□ 0.69
SRRT-212ENST00000487311 KLHDC9Q8NEP7 349 aa19.38■□□□□ 0.69
SRRT-212ENST00000487311 CHMP4BQ9H444 224 aaKnown RBP19.38■□□□□ 0.69
SRRT-212ENST00000487311 M0R2C6 588 aa19.37■□□□□ 0.69
SRRT-212ENST00000487311 ADCY6O43306 1168 aa19.37■□□□□ 0.69
SRRT-212ENST00000487311 PRDM1O75626 825 aa19.37■□□□□ 0.69
SRRT-212ENST00000487311 SMAD3P84022 425 aaKnown RBP19.37■□□□□ 0.69
SRRT-212ENST00000487311 KCNA10Q16322 511 aa19.37■□□□□ 0.69
SRRT-212ENST00000487311 MAMDC4Q6UXC1 1216 aa19.37■□□□□ 0.69
SRRT-212ENST00000487311 DDX11Q96FC9 970 aa19.37■□□□□ 0.69
SRRT-212ENST00000487311 FGD4Q96M96 766 aa19.37■□□□□ 0.69
SRRT-212ENST00000487311 TEX13BQ9BXU2 312 aa19.37■□□□□ 0.69
SRRT-212ENST00000487311 RAVER2Q9HCJ3 691 aaKnown RBP19.37■□□□□ 0.69
SRRT-212ENST00000487311 CNPY2Q9Y2B0 182 aa19.37■□□□□ 0.69
SRRT-212ENST00000487311 SYNRGQ9UMZ2 1314 aa19.36■□□□□ 0.69
SRRT-212ENST00000487311 RNF113AO15541 343 aaKnown RBP19.36■□□□□ 0.69
SRRT-212ENST00000487311 COPB2P35606 906 aa19.36■□□□□ 0.69
SRRT-212ENST00000487311 ACLYP53396 1101 aa19.36■□□□□ 0.69
SRRT-212ENST00000487311 MYLIPQ8WY64 445 aa19.36■□□□□ 0.69
SRRT-212ENST00000487311 APPBP2Q92624 585 aa19.36■□□□□ 0.69
SRRT-212ENST00000487311 MKL1Q969V6 931 aa19.36■□□□□ 0.69
SRRT-212ENST00000487311 CEP95Q96GE4 821 aa19.36■□□□□ 0.69
SRRT-212ENST00000487311 TSEN34Q9BSV6 310 aaKnown RBP19.36■□□□□ 0.69
SRRT-212ENST00000487311 TMEM39AQ9NV64 488 aa19.36■□□□□ 0.69
SRRT-212ENST00000487311 FAM184BQ9ULE4 1060 aa19.36■□□□□ 0.69
SRRT-212ENST00000487311 ROBO3Q96MS0 1386 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 SYNGAP1Q96PV0 1343 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 ATP2A1O14983 1001 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 GPAA1O43292 621 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 RAG1P15918 1043 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 ANKRD33Q7Z3H0 272 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 ZNF444Q8N0Y2 327 aaPredicted RBP19.35■□□□□ 0.69
SRRT-212ENST00000487311 MSL3Q8N5Y2 521 aaKnown RBP19.35■□□□□ 0.69
SRRT-212ENST00000487311 KIFC2Q96AC6 838 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 SEC62Q99442 399 aaKnown RBP19.35■□□□□ 0.69
SRRT-212ENST00000487311 DCTPP1Q9H773 170 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 SLC38A10Q9HBR0 1119 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 MTMR4Q9NYA4 1195 aa19.35■□□□□ 0.69
SRRT-212ENST00000487311 PATL2C9JE40 543 aaKnown RBP19.34■□□□□ 0.69
SRRT-212ENST00000487311 ZBED4O75132 1171 aa19.34■□□□□ 0.69
SRRT-212ENST00000487311 ACVR2BQ13705 512 aa19.34■□□□□ 0.69
SRRT-212ENST00000487311 RNPC3Q96LT9 517 aaKnown RBP19.34■□□□□ 0.69
SRRT-212ENST00000487311 TOX2Q96NM4 488 aa19.34■□□□□ 0.69
SRRT-212ENST00000487311 STARD7Q9NQZ5 370 aa19.34■□□□□ 0.69
SRRT-212ENST00000487311 ZHX1Q9UKY1 873 aaPredicted RBP19.34■□□□□ 0.69
SRRT-212ENST00000487311 DUSP11O75319 330 aaKnown RBP19.33■□□□□ 0.68
SRRT-212ENST00000487311 APPP05067 770 aa19.33■□□□□ 0.68
SRRT-212ENST00000487311 ZNF467Q7Z7K2 595 aaPredicted RBP19.33■□□□□ 0.68
SRRT-212ENST00000487311 IFNL3Q8IZI9 196 aa19.33■□□□□ 0.68
SRRT-212ENST00000487311 LRRC47Q8N1G4 583 aaKnown RBP19.33■□□□□ 0.68
SRRT-212ENST00000487311 MAFAQ8NHW3 353 aaPredicted RBP19.33■□□□□ 0.68
SRRT-212ENST00000487311 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.33■□□□□ 0.68
SRRT-212ENST00000487311 TDO2P48775 406 aa19.32■□□□□ 0.68
SRRT-212ENST00000487311 CDK7P50613 346 aa19.32■□□□□ 0.68
SRRT-212ENST00000487311 CCDC144BQ3MJ40 725 aa19.32■□□□□ 0.68
SRRT-212ENST00000487311 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.32■□□□□ 0.68
SRRT-212ENST00000487311 NUP133Q8WUM0 1156 aa19.32■□□□□ 0.68
SRRT-212ENST00000487311 CHMP4CQ96CF2 233 aa19.32■□□□□ 0.68
SRRT-212ENST00000487311 FEM1BQ9UK73 627 aa19.32■□□□□ 0.68
SRRT-212ENST00000487311 CUL9Q8IWT3 2517 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 MYH4Q9Y623 1939 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 MOXD2PA6NHM9 499 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 DCDC2CA8MYV0 355 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 CTAGE5O15320 804 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 TIMP1P01033 207 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 CNTN2Q02246 1040 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 FPGSQ05932 587 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 C16orf59Q7L2K0 433 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 ANKRD35Q8N283 1001 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 KATNBL1Q9H079 304 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 INCENPQ9NQS7 918 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 TBX21Q9UL17 535 aa19.31■□□□□ 0.68
SRRT-212ENST00000487311 MCM3APO60318 1980 aa19.3■□□□□ 0.68
SRRT-212ENST00000487311 TTLL1O95922 423 aa19.3■□□□□ 0.68
SRRT-212ENST00000487311 ASGR1P07306 291 aa19.3■□□□□ 0.68
SRRT-212ENST00000487311 ZFYP08048 801 aaPredicted RBP19.3■□□□□ 0.68
SRRT-212ENST00000487311 C6orf222P0C671 652 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms