RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 NECTIN1Q15223 517 aa25.26■■□□□ 1.63
BUD23-217ENST00000487006 CCDC178Q5BJE1 867 aa25.26■■□□□ 1.63
BUD23-217ENST00000487006 CHST3Q7LGC8 479 aa25.26■■□□□ 1.63
BUD23-217ENST00000487006 NBPF11Q86T75 865 aa25.26■■□□□ 1.63
BUD23-217ENST00000487006 SHCBP1Q8NEM2 672 aa25.26■■□□□ 1.63
BUD23-217ENST00000487006 NCOA7Q8NI08 942 aa25.26■■□□□ 1.63
BUD23-217ENST00000487006 ANKS1AQ92625 1134 aa25.26■■□□□ 1.63
BUD23-217ENST00000487006 USP6NLQ92738 828 aa25.26■■□□□ 1.63
BUD23-217ENST00000487006 GPCPD1Q9NPB8 672 aa25.26■■□□□ 1.63
BUD23-217ENST00000487006 COL9A3Q14050 684 aaPredicted RBP25.25■■□□□ 1.63
BUD23-217ENST00000487006 SEC23AQ15436 765 aa25.25■■□□□ 1.63
BUD23-217ENST00000487006 FAM160B2Q86V87 743 aa25.25■■□□□ 1.63
BUD23-217ENST00000487006 RIOX2Q8IUF8 465 aa25.25■■□□□ 1.63
BUD23-217ENST00000487006 MB21D2Q8IYB1 491 aaPredicted RBP25.25■■□□□ 1.63
BUD23-217ENST00000487006 CPXCR1Q8N123 301 aa25.25■■□□□ 1.63
BUD23-217ENST00000487006 PNMA1Q8ND90 353 aa25.25■■□□□ 1.63
BUD23-217ENST00000487006 KAT14Q9H8E8 782 aa25.25■■□□□ 1.63
BUD23-217ENST00000487006 SLC38A10Q9HBR0 1119 aa25.25■■□□□ 1.63
BUD23-217ENST00000487006 RAVER2Q9HCJ3 691 aaKnown RBP25.25■■□□□ 1.63
BUD23-217ENST00000487006 BIN2Q9UBW5 565 aaPredicted RBP25.25■■□□□ 1.63
BUD23-217ENST00000487006 IVNS1ABPQ9Y6Y0 642 aa25.25■■□□□ 1.63
BUD23-217ENST00000487006 ZNF236Q9UL36 1845 aa25.25■■□□□ 1.63
BUD23-217ENST00000487006 SMCHD1A6NHR9 2005 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 RBBP6Q7Z6E9 1792 aaKnown RBP25.24■■□□□ 1.63
BUD23-217ENST00000487006 ZBED4O75132 1171 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 SLC16A2P36021 539 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 ANTXR2P58335 489 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 SNAP25P60880 206 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 GRB14Q14449 540 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 MTFR1Q15390 333 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 SNRNP48Q6IEG0 339 aaKnown RBP25.24■■□□□ 1.63
BUD23-217ENST00000487006 PXYLP1Q8TE99 480 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 CHURC1Q8WUH1 139 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 PRR12Q9ULL5 1215 aa25.24■■□□□ 1.63
BUD23-217ENST00000487006 SLC15A5A6NIM6 579 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 PLA2G6O60733 806 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 INHAP05111 366 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 SNHG28P0DPA3 235 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 RGS2P41220 211 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 SLC4A3P48751 1232 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 ZNF543Q08ER8 600 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 MAP2K5Q13163 448 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 IFIT1BQ5T764 474 aaKnown RBP25.23■■□□□ 1.63
BUD23-217ENST00000487006 TRIB2Q92519 343 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 TEX13BQ9BXU2 312 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 MROH8Q9H579 483 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 SENP2Q9HC62 589 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 RIPK3Q9Y572 518 aa25.23■■□□□ 1.63
BUD23-217ENST00000487006 CTDP1Q9Y5B0 961 aaPredicted RBP25.23■■□□□ 1.63
BUD23-217ENST00000487006 SLC25A27O95847 323 aa25.22■■□□□ 1.63
BUD23-217ENST00000487006 GOLGA8HP0CJ92 632 aa25.22■■□□□ 1.63
BUD23-217ENST00000487006 TRIM32Q13049 653 aa25.22■■□□□ 1.63
BUD23-217ENST00000487006 CCL14Q16627 93 aa25.22■■□□□ 1.63
BUD23-217ENST00000487006 APBA2Q99767 749 aa25.22■■□□□ 1.63
BUD23-217ENST00000487006 POTEFA5A3E0 1075 aa25.21■■□□□ 1.63
BUD23-217ENST00000487006 IFIT3O14879 490 aaKnown RBP25.21■■□□□ 1.63
BUD23-217ENST00000487006 ADORA2AP29274 412 aa25.21■■□□□ 1.63
BUD23-217ENST00000487006 BRCA2P51587 3418 aa25.21■■□□□ 1.63
BUD23-217ENST00000487006 ZNF536O15090 1300 aa25.2■■□□□ 1.62
BUD23-217ENST00000487006 ATP2A1O14983 1001 aa25.2■■□□□ 1.62
BUD23-217ENST00000487006 XRCC5P13010 732 aaKnown RBP25.2■■□□□ 1.62
BUD23-217ENST00000487006 TAL1P17542 331 aaPredicted RBP25.2■■□□□ 1.62
BUD23-217ENST00000487006 SYDE2Q5VT97 1194 aa25.2■■□□□ 1.62
BUD23-217ENST00000487006 CCDC174Q6PII3 467 aa25.2■■□□□ 1.62
BUD23-217ENST00000487006 BTNL9Q6UXG8 535 aa25.2■■□□□ 1.62
BUD23-217ENST00000487006 CPVLQ9H3G5 476 aa25.2■■□□□ 1.62
BUD23-217ENST00000487006 PLXNA1Q9UIW2 1896 aa25.19■■□□□ 1.62
BUD23-217ENST00000487006 HMGCRP04035 888 aa25.19■■□□□ 1.62
BUD23-217ENST00000487006 UBXN2AP68543 259 aa25.19■■□□□ 1.62
BUD23-217ENST00000487006 RASEFQ8IZ41 740 aa25.19■■□□□ 1.62
BUD23-217ENST00000487006 NPLOC4Q8TAT6 608 aa25.19■■□□□ 1.62
BUD23-217ENST00000487006 AGBL1Q96MI9 1066 aa25.19■■□□□ 1.62
BUD23-217ENST00000487006 UNC93B1Q9H1C4 597 aa25.19■■□□□ 1.62
BUD23-217ENST00000487006 GPHNQ9NQX3 736 aaPredicted RBP25.19■■□□□ 1.62
BUD23-217ENST00000487006 FLRT1Q9NZU1 646 aa25.19■■□□□ 1.62
BUD23-217ENST00000487006 STRNO43815 780 aa25.18■■□□□ 1.62
BUD23-217ENST00000487006 COBLO75128 1261 aa25.18■■□□□ 1.62
BUD23-217ENST00000487006 FCER1AP12319 257 aa25.18■■□□□ 1.62
BUD23-217ENST00000487006 CCL5P13501 91 aa25.18■■□□□ 1.62
BUD23-217ENST00000487006 ZKSCAN1P17029 563 aaPredicted RBP25.18■■□□□ 1.62
BUD23-217ENST00000487006 OAZ1P54368 228 aa25.18■■□□□ 1.62
BUD23-217ENST00000487006 TMEM67Q5HYA8 995 aa25.18■■□□□ 1.62
BUD23-217ENST00000487006 RNF20Q5VTR2 975 aa25.18■■□□□ 1.62
BUD23-217ENST00000487006 MMP19Q99542 508 aa25.18■■□□□ 1.62
BUD23-217ENST00000487006 ERICH2A1L162 156 aa25.17■■□□□ 1.62
BUD23-217ENST00000487006 PRC1O43663 620 aa25.17■■□□□ 1.62
BUD23-217ENST00000487006 FDX1P10109 184 aa25.17■■□□□ 1.62
BUD23-217ENST00000487006 COPB2P35606 906 aa25.17■■□□□ 1.62
BUD23-217ENST00000487006 WTAPQ15007 396 aa25.17■■□□□ 1.62
BUD23-217ENST00000487006 DPP9Q86TI2 863 aa25.17■■□□□ 1.62
BUD23-217ENST00000487006 TMEM106CQ9BVX2 250 aa25.17■■□□□ 1.62
BUD23-217ENST00000487006 UBA5Q9GZZ9 404 aa25.17■■□□□ 1.62
BUD23-217ENST00000487006 RANBP17Q9H2T7 1088 aaKnown RBP25.17■■□□□ 1.62
BUD23-217ENST00000487006 HOMER2Q9NSB8 354 aa25.17■■□□□ 1.62
BUD23-217ENST00000487006 PGK2P07205 417 aa25.16■■□□□ 1.62
BUD23-217ENST00000487006 HOXC6P09630 235 aa25.16■■□□□ 1.62
BUD23-217ENST00000487006 SART3Q15020 963 aaKnown RBP25.16■■□□□ 1.62
BUD23-217ENST00000487006 GPATCH4Q5T3I0 446 aaKnown RBP25.16■■□□□ 1.62
BUD23-217ENST00000487006 ABRAQ8N0Z2 381 aa25.16■■□□□ 1.62
BUD23-217ENST00000487006 IGDCC4Q8TDY8 1250 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms