RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 BRSK2Q8IWQ3 736 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 SULF1Q8IWU6 871 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 MAFAQ8NHW3 353 aaPredicted RBP6.46□□□□□ -1.38
SF1-217ENST00000486960 JARID2Q92833 1246 aaPredicted RBP6.46□□□□□ -1.38
SF1-217ENST00000486960 L3MBTL2Q969R5 705 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 ZNF333Q96JL9 665 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 EYA1Q99502 592 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 MKNK1Q9BUB5 465 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 RBSNQ9H1K0 784 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 ZNF277Q9NRM2 450 aaPredicted RBP6.46□□□□□ -1.38
SF1-217ENST00000486960 TMEM63CQ9P1W3 806 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 HCN4Q9Y3Q4 1203 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 TRIM17Q9Y577 477 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 AK5Q9Y6K8 562 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 MRC1P22897 1456 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 USP42Q9H9J4 1324 aaKnown RBP6.46□□□□□ -1.38
SF1-217ENST00000486960 IRS2Q9Y4H2 1338 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 MYO15AQ9UKN7 3530 aa6.46□□□□□ -1.38
SF1-217ENST00000486960 E2F8A0AVK6 867 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 C2orf72A6NCS6 295 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 hCG_1984214I3L0E3 225 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 CHL1O00533 1208 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 SNX2O60749 519 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 CTSHP09668 335 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 TRIM27P14373 513 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 NPR3P17342 541 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 POU3F3P20264 500 aaPredicted RBP6.45□□□□□ -1.38
SF1-217ENST00000486960 RFC4P35249 363 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 GUCY2FP51841 1108 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 NEK2P51955 445 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 NEK3P51956 506 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 SFSWAPQ12872 951 aaKnown RBP6.45□□□□□ -1.38
SF1-217ENST00000486960 SQSTM1Q13501 440 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 NR6A1Q15406 480 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 EML3Q32P44 896 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 LRIT3Q3SXY7 679 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 TJAP1Q5JTD0 557 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 RC3H1Q5TC82 1133 aaKnown RBP6.45□□□□□ -1.38
SF1-217ENST00000486960 NXNQ6DKJ4 435 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 MZT2AQ6P582 158 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 OLFM4Q6UX06 510 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 DAAM2Q86T65 1068 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 C11orf74Q86VG3 221 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 TCEAL8Q8IYN2 117 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 GPC2Q8N158 579 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 OR8H2Q8N162 312 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 SYNPOQ8N3V7 929 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 USP38Q8NB14 1042 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 PI4K2BQ8TCG2 481 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 HNRNPLLQ8WVV9 542 aaKnown RBP6.45□□□□□ -1.38
SF1-217ENST00000486960 SMARCC1Q92922 1105 aaPredicted RBP6.45□□□□□ -1.38
SF1-217ENST00000486960 NUDT12Q9BQG2 462 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 FAM126AQ9BYI3 521 aaPredicted RBP6.45□□□□□ -1.38
SF1-217ENST00000486960 SH3GLB2Q9NR46 395 aa6.45□□□□□ -1.38
SF1-217ENST00000486960 FLNBO75369 2602 aaKnown RBP6.45□□□□□ -1.38
SF1-217ENST00000486960 DMDP11532 3685 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 ZNF609O15014 1411 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 SMG6Q86US8 1419 aaKnown RBP6.44□□□□□ -1.38
SF1-217ENST00000486960 DNAH14Q0VDD8 3507 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 DMXL1Q9Y485 3027 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 IPO5O00410 1097 aaKnown RBP6.44□□□□□ -1.38
SF1-217ENST00000486960 MYCP01106 439 aaPredicted RBP6.44□□□□□ -1.38
SF1-217ENST00000486960 NCAM1P13591 858 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 ATP6V1AP38606 617 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 ZNF157P51786 506 aaPredicted RBP6.44□□□□□ -1.38
SF1-217ENST00000486960 CLDN10P78369 228 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 TRIM29Q14134 588 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 DOK7Q18PE1 504 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 DACT2Q5SW24 774 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 FAM102BQ5T8I3 360 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 WWC2Q6AWC2 1192 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 PODNQ7Z5L7 613 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 SNX32Q86XE0 403 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 RASAL3Q86YV0 1011 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 TBC1D31Q96DN5 1066 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 SETDB2Q96T68 719 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 GDF15Q99988 308 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 CDH19Q9H159 772 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 RANBP17Q9H2T7 1088 aaKnown RBP6.44□□□□□ -1.38
SF1-217ENST00000486960 CAAP1Q9H8G2 361 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 RBM28Q9NW13 759 aaKnown RBP6.44□□□□□ -1.38
SF1-217ENST00000486960 STRIP2Q9ULQ0 834 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 NOB1Q9ULX3 412 aaKnown RBP6.44□□□□□ -1.38
SF1-217ENST00000486960 PTPN22Q9Y2R2 807 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 IPPQ9Y573 584 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 IKBKGQ9Y6K9 419 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 TRIOO75962 3097 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 SSC5DA1L4H1 1573 aa6.44□□□□□ -1.38
SF1-217ENST00000486960 COL2A1P02458 1487 aaPredicted RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 PIP5K1CO60331 668 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 EVI5O60447 810 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 FKTNO75072 461 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 RPS6KA4O75676 772 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 TNFAIP3P21580 790 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 HOXC13P31276 330 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 SOX5P35711 763 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 STAT3P40763 770 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 NASPP49321 788 aaPredicted RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 ZNF132P52740 706 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 HIRAP54198 1017 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms