RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 RIPK3Q9Y572 518 aa26.66■■□□□ 1.86
SREBF1-214ENST00000486311 CCDC129Q6ZRS4 1044 aa26.65■■□□□ 1.86
SREBF1-214ENST00000486311 KIFC2Q96AC6 838 aa26.65■■□□□ 1.86
SREBF1-214ENST00000486311 SLC38A10Q9HBR0 1119 aa26.65■■□□□ 1.86
SREBF1-214ENST00000486311 DNAH12Q6ZR08 3092 aa26.65■■□□□ 1.86
SREBF1-214ENST00000486311 PDE1AP54750 535 aa26.64■■□□□ 1.86
SREBF1-214ENST00000486311 RTP1P59025 263 aa26.64■■□□□ 1.86
SREBF1-214ENST00000486311 LRRC41Q15345 812 aa26.64■■□□□ 1.86
SREBF1-214ENST00000486311 LRIT3Q3SXY7 679 aa26.64■■□□□ 1.86
SREBF1-214ENST00000486311 SLFN13Q68D06 897 aa26.64■■□□□ 1.86
SREBF1-214ENST00000486311 MSL3Q8N5Y2 521 aaKnown RBP26.64■■□□□ 1.86
SREBF1-214ENST00000486311 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.64■■□□□ 1.86
SREBF1-214ENST00000486311 BMP3P12645 472 aa26.63■■□□□ 1.85
SREBF1-214ENST00000486311 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.63■■□□□ 1.85
SREBF1-214ENST00000486311 CPXCR1Q8N123 301 aa26.63■■□□□ 1.85
SREBF1-214ENST00000486311 CTDP1Q9Y5B0 961 aaPredicted RBP26.63■■□□□ 1.85
SREBF1-214ENST00000486311 DNAJC25-GNG10A0A024R161 153 aa26.62■■□□□ 1.85
SREBF1-214ENST00000486311 MYCNP04198 464 aaPredicted RBP26.62■■□□□ 1.85
SREBF1-214ENST00000486311 ZNF865P0CJ78 1059 aaPredicted RBP26.62■■□□□ 1.85
SREBF1-214ENST00000486311 RARBP10826 455 aa26.62■■□□□ 1.85
SREBF1-214ENST00000486311 TAL1P17542 331 aaPredicted RBP26.62■■□□□ 1.85
SREBF1-214ENST00000486311 OAZ1P54368 228 aa26.62■■□□□ 1.85
SREBF1-214ENST00000486311 MDM2Q00987 491 aaPredicted RBP26.62■■□□□ 1.85
SREBF1-214ENST00000486311 PPP4R3BQ5MIZ7 849 aa26.62■■□□□ 1.85
SREBF1-214ENST00000486311 SLC39A5Q6ZMH5 540 aa26.62■■□□□ 1.85
SREBF1-214ENST00000486311 DDX11Q96FC9 970 aa26.62■■□□□ 1.85
SREBF1-214ENST00000486311 RAVER2Q9HCJ3 691 aaKnown RBP26.62■■□□□ 1.85
SREBF1-214ENST00000486311 XPNPEP3Q9NQH7 507 aa26.62■■□□□ 1.85
SREBF1-214ENST00000486311 COL11A1P12107 1806 aaPredicted RBP26.62■■□□□ 1.85
SREBF1-214ENST00000486311 SNX17Q15036 470 aa26.61■■□□□ 1.85
SREBF1-214ENST00000486311 VPS53Q5VIR6 699 aa26.61■■□□□ 1.85
SREBF1-214ENST00000486311 GPR153Q6NV75 609 aa26.61■■□□□ 1.85
SREBF1-214ENST00000486311 GMCL1Q96IK5 515 aa26.61■■□□□ 1.85
SREBF1-214ENST00000486311 HELLSQ9NRZ9 838 aa26.61■■□□□ 1.85
SREBF1-214ENST00000486311 ANAPC4Q9UJX5 808 aa26.61■■□□□ 1.85
SREBF1-214ENST00000486311 CNPY2Q9Y2B0 182 aa26.61■■□□□ 1.85
SREBF1-214ENST00000486311 FDX1P10109 184 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 AKR1A1P14550 325 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 ADCYAP1R1P41586 468 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 SLC4A3P48751 1232 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 CTDSPL2Q05D32 466 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 AAMPQ13685 434 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 MAMDC4Q6UXC1 1216 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 TICAM2Q86XR7 235 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 FBXO40Q9UH90 709 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 ATP11BQ9Y2G3 1177 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 SYNGAP1Q96PV0 1343 aa26.6■■□□□ 1.85
SREBF1-214ENST00000486311 ALX1Q15699 326 aa26.59■■□□□ 1.85
SREBF1-214ENST00000486311 ZNF467Q7Z7K2 595 aaPredicted RBP26.59■■□□□ 1.85
SREBF1-214ENST00000486311 CHST13Q8NET6 341 aa26.59■■□□□ 1.85
SREBF1-214ENST00000486311 LBHD1Q9BQE6 289 aaPredicted RBP26.59■■□□□ 1.85
SREBF1-214ENST00000486311 INCENPQ9NQS7 918 aa26.59■■□□□ 1.85
SREBF1-214ENST00000486311 PRKAG2Q9UGJ0 569 aa26.59■■□□□ 1.85
SREBF1-214ENST00000486311 PHF24Q9UPV7 400 aa26.59■■□□□ 1.85
SREBF1-214ENST00000486311 TSPY2A6NKD2 308 aa26.58■■□□□ 1.85
SREBF1-214ENST00000486311 TMEM232C9JQI7 657 aa26.58■■□□□ 1.85
SREBF1-214ENST00000486311 SNAI1O95863 264 aaPredicted RBP26.58■■□□□ 1.85
SREBF1-214ENST00000486311 C1orf53Q5VUE5 145 aa26.58■■□□□ 1.85
SREBF1-214ENST00000486311 RNF180Q86T96 592 aa26.58■■□□□ 1.85
SREBF1-214ENST00000486311 IL17RBQ9NRM6 502 aa26.58■■□□□ 1.85
SREBF1-214ENST00000486311 STX8Q9UNK0 236 aa26.58■■□□□ 1.85
SREBF1-214ENST00000486311 PGK1P00558 417 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 SLC1A4P43007 532 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 STAT2P52630 851 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 TRIM60Q495X7 471 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 FAM160B2Q86V87 743 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 ANKRD35Q8N283 1001 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 CHURC1Q8WUH1 139 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 STAG1Q8WVM7 1258 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 FERMT2Q96AC1 680 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 TACC3Q9Y6A5 838 aa26.57■■□□□ 1.84
SREBF1-214ENST00000486311 ORC4O43929 436 aa26.56■■□□□ 1.84
SREBF1-214ENST00000486311 PLA2G6O60733 806 aa26.56■■□□□ 1.84
SREBF1-214ENST00000486311 FGRP09769 529 aa26.56■■□□□ 1.84
SREBF1-214ENST00000486311 MCCP23508 829 aa26.56■■□□□ 1.84
SREBF1-214ENST00000486311 NOVP48745 357 aa26.56■■□□□ 1.84
SREBF1-214ENST00000486311 MCMDC2Q4G0Z9 681 aa26.56■■□□□ 1.84
SREBF1-214ENST00000486311 FAM227BQ96M60 508 aa26.56■■□□□ 1.84
SREBF1-214ENST00000486311 A0A0D9SFI3 127 aa26.55■■□□□ 1.84
SREBF1-214ENST00000486311 NMT2O60551 498 aa26.55■■□□□ 1.84
SREBF1-214ENST00000486311 ADAMTS4O75173 837 aa26.55■■□□□ 1.84
SREBF1-214ENST00000486311 LENG1Q96BZ8 264 aaPredicted RBP26.55■■□□□ 1.84
SREBF1-214ENST00000486311 FGD4Q96M96 766 aa26.55■■□□□ 1.84
SREBF1-214ENST00000486311 LNPKQ9C0E8 428 aa26.55■■□□□ 1.84
SREBF1-214ENST00000486311 FAM184BQ9ULE4 1060 aa26.55■■□□□ 1.84
SREBF1-214ENST00000486311 ISY1Q9ULR0 285 aaKnown RBP26.55■■□□□ 1.84
SREBF1-214ENST00000486311 RANBP6O60518 1105 aaKnown RBP26.54■■□□□ 1.84
SREBF1-214ENST00000486311 SMC5Q8IY18 1101 aa26.54■■□□□ 1.84
SREBF1-214ENST00000486311 ZHX1Q9UKY1 873 aaPredicted RBP26.54■■□□□ 1.84
SREBF1-214ENST00000486311 ZNFX1Q9P2E3 1918 aaKnown RBP26.54■■□□□ 1.84
SREBF1-214ENST00000486311 ZNF536O15090 1300 aa26.54■■□□□ 1.84
SREBF1-214ENST00000486311 MYH4Q9Y623 1939 aa26.53■■□□□ 1.84
SREBF1-214ENST00000486311 FGAP02671 866 aa26.53■■□□□ 1.84
SREBF1-214ENST00000486311 IKQ13123 557 aaPredicted RBP26.53■■□□□ 1.84
SREBF1-214ENST00000486311 RCSD1Q6JBY9 416 aa26.53■■□□□ 1.84
SREBF1-214ENST00000486311 YTHDC1Q96MU7 727 aaKnown RBP26.53■■□□□ 1.84
SREBF1-214ENST00000486311 RWDD1Q9H446 243 aaPredicted RBP26.53■■□□□ 1.84
SREBF1-214ENST00000486311 ACAD9Q9H845 621 aa26.53■■□□□ 1.84
SREBF1-214ENST00000486311 PDLIM7Q9NR12 457 aa26.53■■□□□ 1.84
SREBF1-214ENST00000486311 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms