RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.177e-10■□□□□ 8.1
NELFCD-209ENST00000486263 DGKZQ13574 1117 aa16.11■□□□□ 0.17
NELFCD-209ENST00000486263 CUL4AQ13619 759 aa16.11■□□□□ 0.17
NELFCD-209ENST00000486263 KIAA1755Q5JYT7 1200 aa16.11■□□□□ 0.17
NELFCD-209ENST00000486263 TMTC3Q6ZXV5 915 aa16.11■□□□□ 0.17
NELFCD-209ENST00000486263 RASGRP2Q7LDG7 609 aa16.11■□□□□ 0.17
NELFCD-209ENST00000486263 FAM160B2Q86V87 743 aa16.11■□□□□ 0.17
NELFCD-209ENST00000486263 UBA5Q9GZZ9 404 aa16.11■□□□□ 0.17
NELFCD-209ENST00000486263 VAT1LQ9HCJ6 419 aa16.11■□□□□ 0.17
NELFCD-209ENST00000486263 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
NELFCD-209ENST00000486263 CTDP1Q9Y5B0 961 aaPredicted RBP16.11■□□□□ 0.17
NELFCD-209ENST00000486263 CCL15-CCL14A0A0B4J2E2 113 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 USP17L15C9J2P7 530 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 USP17L13C9JLJ4 530 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 USP17L11C9JVI0 530 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 USP17L18D6R9N7 530 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 USP17L22D6RA61 530 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 USP17L17D6RBQ6 530 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 USP17L19D6RCP7 530 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 USP17L20D6RJB6 530 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 FLOT1O75955 427 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 IFNAR1P17181 557 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 SLC16A2P36021 539 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 USP17L24Q0WX57 530 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 CCL15Q16663 113 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 TTBK2Q6IQ55 1244 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 CMTR1Q8N1G2 835 aaKnown RBP16.1■□□□□ 0.17
NELFCD-209ENST00000486263 SRBD1Q8N5C6 995 aaKnown RBP16.1■□□□□ 0.17
NELFCD-209ENST00000486263 FAM184AQ8NB25 1140 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 KIFC2Q96AC6 838 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 INTS4Q96HW7 963 aaKnown RBP16.1■□□□□ 0.17
NELFCD-209ENST00000486263 SLC26A6Q9BXS9 759 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 RNF186Q9NXI6 227 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 KIF3AQ9Y496 699 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 PHIPQ8WWQ0 1821 aa16.1■□□□□ 0.17
NELFCD-209ENST00000486263 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
NELFCD-209ENST00000486263 SMARCA1P28370 1054 aa16.09■□□□□ 0.17
NELFCD-209ENST00000486263 SLC4A3P48751 1232 aa16.09■□□□□ 0.17
NELFCD-209ENST00000486263 HMGN5P82970 282 aaKnown RBP16.09■□□□□ 0.17
NELFCD-209ENST00000486263 SYDE2Q5VT97 1194 aa16.09■□□□□ 0.17
NELFCD-209ENST00000486263 PIBF1Q8WXW3 757 aa16.09■□□□□ 0.17
NELFCD-209ENST00000486263 PHKBQ93100 1093 aa16.09■□□□□ 0.17
NELFCD-209ENST00000486263 RRP36Q96EU6 259 aaKnown RBP16.09■□□□□ 0.17
NELFCD-209ENST00000486263 IPO9Q96P70 1041 aaKnown RBP16.09■□□□□ 0.17
NELFCD-209ENST00000486263 SPZ1Q9BXG8 430 aa16.09■□□□□ 0.17
NELFCD-209ENST00000486263 RBM27Q9P2N5 1060 aaKnown RBP16.09■□□□□ 0.17
NELFCD-209ENST00000486263 SEC63Q9UGP8 760 aaKnown RBP16.09■□□□□ 0.17
NELFCD-209ENST00000486263 AGTPBP1Q9UPW5 1226 aa16.09■□□□□ 0.17
NELFCD-209ENST00000486263 CASP8AP2Q9UKL3 1982 aa16.09■□□□□ 0.17
NELFCD-209ENST00000486263 PLA2G6O60733 806 aa16.08■□□□□ 0.16
NELFCD-209ENST00000486263 PPFIA3O75145 1194 aa16.08■□□□□ 0.16
NELFCD-209ENST00000486263 ALDH1A1P00352 501 aa16.08■□□□□ 0.16
NELFCD-209ENST00000486263 OSBPP22059 807 aa16.08■□□□□ 0.16
NELFCD-209ENST00000486263 IRX3P78415 501 aaPredicted RBP16.08■□□□□ 0.16
NELFCD-209ENST00000486263 ADGRF4Q8IZF3 695 aa16.08■□□□□ 0.16
NELFCD-209ENST00000486263 PRPF38AQ8NAV1 312 aaKnown RBP16.08■□□□□ 0.16
NELFCD-209ENST00000486263 NSUN7Q8NE18 718 aaKnown RBP16.08■□□□□ 0.16
NELFCD-209ENST00000486263 DDX11Q96FC9 970 aa16.08■□□□□ 0.16
NELFCD-209ENST00000486263 SLF1Q9BQI6 1058 aa16.08■□□□□ 0.16
NELFCD-209ENST00000486263 CFHR5Q9BXR6 569 aa16.08■□□□□ 0.16
NELFCD-209ENST00000486263 RNF26Q9BY78 433 aaPredicted RBP16.08■□□□□ 0.16
NELFCD-209ENST00000486263 CPVLQ9H3G5 476 aa16.08■□□□□ 0.16
NELFCD-209ENST00000486263 ORC3Q9UBD5 711 aaPredicted RBP16.08■□□□□ 0.16
NELFCD-209ENST00000486263 V9GY48 417 aaPredicted RBP16.08■□□□□ 0.16
NELFCD-209ENST00000486263 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
NELFCD-209ENST00000486263 JAK2O60674 1132 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 TRPA1O75762 1119 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 FMNL1O95466 1100 aaPredicted RBP16.07■□□□□ 0.16
NELFCD-209ENST00000486263 ST3GAL1Q11201 340 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 COG2Q14746 738 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 NTRK3Q16288 839 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 NOM1Q5C9Z4 860 aaKnown RBP16.07■□□□□ 0.16
NELFCD-209ENST00000486263 TREML2Q5T2D2 321 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 BTNL9Q6UXG8 535 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 CATSPERGQ6ZRH7 1159 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 HOMER1Q86YM7 354 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 WASF1Q92558 559 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 MS4A4AQ96JQ5 239 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 HOXC10Q9NYD6 342 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 PNMA3Q9UL41 463 aa16.07■□□□□ 0.16
NELFCD-209ENST00000486263 CNTNAP5Q8WYK1 1306 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 STK36Q9NRP7 1315 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 PRPF3O43395 683 aaKnown RBP16.06■□□□□ 0.16
NELFCD-209ENST00000486263 ZBED4O75132 1171 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 DEXIO95424 95 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 GJB2P29033 226 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 HOXA7P31268 230 aaPredicted RBP16.06■□□□□ 0.16
NELFCD-209ENST00000486263 NBPF11Q86T75 865 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 TNS4Q8IZW8 715 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 RIOX1Q9H6W3 641 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 JMJD4Q9H9V9 463 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 PPP1R9AQ9ULJ8 1098 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 PRR12Q9ULL5 1215 aa16.06■□□□□ 0.16
NELFCD-209ENST00000486263 hCG_1642624A0A1W2PR95 340 aa16.05■□□□□ 0.16
NELFCD-209ENST00000486263 CYTH3O43739 400 aa16.05■□□□□ 0.16
NELFCD-209ENST00000486263 DTNBO60941 627 aa16.05■□□□□ 0.16
NELFCD-209ENST00000486263 FDX1P10109 184 aa16.05■□□□□ 0.16
NELFCD-209ENST00000486263 XBP1P17861 261 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms