RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 VWA5AO00534 786 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 ORC4O43929 436 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 PRDM1O75626 825 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 ERCC3P19447 782 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 TFAP4Q01664 338 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 FAM83BQ5T0W9 1011 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 OLFML2BQ68BL8 750 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 RIOX2Q8IUF8 465 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 SLF1Q9BQI6 1058 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 CTNNA3Q9UI47 895 aa20.02■□□□□ 0.8
VIM-205ENST00000485947 RLFQ13129 1914 aa20.02■□□□□ 0.79
VIM-205ENST00000485947 ATP2A1O14983 1001 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 MSCO60682 206 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 NDUFB10O96000 172 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 FCER1AP12319 257 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 CACNB2Q08289 660 aaPredicted RBP20.01■□□□□ 0.79
VIM-205ENST00000485947 VPS53Q5VIR6 699 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 DPP9Q86TI2 863 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 STK11IPQ8N1F8 1099 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 KIF2CQ99661 725 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 FEM1BQ9UK73 627 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 OGDHLQ9ULD0 1010 aa20.01■□□□□ 0.79
VIM-205ENST00000485947 IGHA2P01877 340 aa20■□□□□ 0.79
VIM-205ENST00000485947 FGAP02671 866 aa20■□□□□ 0.79
VIM-205ENST00000485947 ADORA2AP29274 412 aa20■□□□□ 0.79
VIM-205ENST00000485947 STAT3P40763 770 aa20■□□□□ 0.79
VIM-205ENST00000485947 PLS1Q14651 629 aa20■□□□□ 0.79
VIM-205ENST00000485947 TMEM132BQ14DG7 1078 aa20■□□□□ 0.79
VIM-205ENST00000485947 RABEP1Q15276 862 aa20■□□□□ 0.79
VIM-205ENST00000485947 CREB3L3Q68CJ9 461 aa20■□□□□ 0.79
VIM-205ENST00000485947 ZNF236Q9UL36 1845 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 TSPY2A6NKD2 308 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 H0YGN5 161 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 SLC27A2O14975 620 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 RAD21O60216 631 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 PLA2G6O60733 806 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 NOVP48745 357 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 OAZ1P54368 228 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 TRIM32Q13049 653 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 TSGA10IPQ3SY00 556 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 NECAB2Q7Z6G3 386 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 NCAPG2Q86XI2 1143 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 GMCL1Q96IK5 515 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 TEX13BQ9BXU2 312 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 FBXO28Q9NVF7 368 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 ZNF214Q9UL59 606 aaPredicted RBP19.99■□□□□ 0.79
VIM-205ENST00000485947 DIS3Q9Y2L1 958 aaKnown RBP19.99■□□□□ 0.79
VIM-205ENST00000485947 SNX14Q9Y5W7 946 aa19.99■□□□□ 0.79
VIM-205ENST00000485947 ZBED4O75132 1171 aa19.98■□□□□ 0.79
VIM-205ENST00000485947 KRT32Q14532 448 aa19.98■□□□□ 0.79
VIM-205ENST00000485947 CCL14Q16627 93 aa19.98■□□□□ 0.79
VIM-205ENST00000485947 REPS2Q8NFH8 660 aa19.98■□□□□ 0.79
VIM-205ENST00000485947 TCP11L1Q9NUJ3 509 aa19.98■□□□□ 0.79
VIM-205ENST00000485947 NRBP1Q9UHY1 535 aa19.98■□□□□ 0.79
VIM-205ENST00000485947 NR2E3Q9Y5X4 410 aa19.98■□□□□ 0.79
VIM-205ENST00000485947 BMP3P12645 472 aa19.97■□□□□ 0.79
VIM-205ENST00000485947 KCTD2Q14681 263 aa19.97■□□□□ 0.79
VIM-205ENST00000485947 FAM47AQ5JRC9 791 aa19.97■□□□□ 0.79
VIM-205ENST00000485947 SLFN13Q68D06 897 aa19.97■□□□□ 0.79
VIM-205ENST00000485947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.97■□□□□ 0.79
VIM-205ENST00000485947 FAM160B2Q86V87 743 aa19.97■□□□□ 0.79
VIM-205ENST00000485947 CHURC1Q8WUH1 139 aa19.97■□□□□ 0.79
VIM-205ENST00000485947 DPF3Q92784 378 aa19.97■□□□□ 0.79
VIM-205ENST00000485947 NBPF3Q9H094 633 aa19.97■□□□□ 0.79
VIM-205ENST00000485947 RNF41Q9H4P4 317 aaPredicted RBP19.97■□□□□ 0.79
VIM-205ENST00000485947 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
VIM-205ENST00000485947 IMMTQ16891 758 aaKnown RBP19.96■□□□□ 0.79
VIM-205ENST00000485947 RCSD1Q6JBY9 416 aa19.96■□□□□ 0.79
VIM-205ENST00000485947 SLC17A8Q8NDX2 589 aa19.96■□□□□ 0.79
VIM-205ENST00000485947 NPLOC4Q8TAT6 608 aa19.96■□□□□ 0.79
VIM-205ENST00000485947 TM6SF1Q9BZW5 370 aa19.96■□□□□ 0.79
VIM-205ENST00000485947 SLC38A10Q9HBR0 1119 aa19.96■□□□□ 0.79
VIM-205ENST00000485947 CTDP1Q9Y5B0 961 aaPredicted RBP19.96■□□□□ 0.79
VIM-205ENST00000485947 RANBP6O60518 1105 aaKnown RBP19.95■□□□□ 0.78
VIM-205ENST00000485947 CYP21A2P08686 494 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 STAT2P52630 851 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 LHX8Q68G74 356 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 RASEFQ8IZ41 740 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 MSL3Q8N5Y2 521 aaKnown RBP19.95■□□□□ 0.78
VIM-205ENST00000485947 TTC14Q96N46 770 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 MMP19Q99542 508 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 FLRT1Q9NZU1 646 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 FBXO40Q9UH90 709 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 STX8Q9UNK0 236 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 PARP14Q460N5 1801 aa19.95■□□□□ 0.78
VIM-205ENST00000485947 COBLO75128 1261 aa19.94■□□□□ 0.78
VIM-205ENST00000485947 PSMA5P28066 241 aa19.94■□□□□ 0.78
VIM-205ENST00000485947 SLC1A4P43007 532 aa19.94■□□□□ 0.78
VIM-205ENST00000485947 AKNAD1Q5T1N1 836 aa19.94■□□□□ 0.78
VIM-205ENST00000485947 SAMD1Q6SPF0 538 aaPredicted RBP19.94■□□□□ 0.78
VIM-205ENST00000485947 CHRDL2Q6WN34 429 aa19.94■□□□□ 0.78
VIM-205ENST00000485947 MFSD6Q6ZSS7 791 aa19.94■□□□□ 0.78
VIM-205ENST00000485947 LRRC47Q8N1G4 583 aaKnown RBP19.94■□□□□ 0.78
VIM-205ENST00000485947 STAG1Q8WVM7 1258 aa19.94■□□□□ 0.78
VIM-205ENST00000485947 PAWRQ96IZ0 340 aaKnown RBP19.94■□□□□ 0.78
VIM-205ENST00000485947 NUP88Q99567 741 aaPredicted RBP19.94■□□□□ 0.78
VIM-205ENST00000485947 IL17RBQ9NRM6 502 aa19.94■□□□□ 0.78
VIM-205ENST00000485947 CYBAP13498 195 aa19.93■□□□□ 0.78
VIM-205ENST00000485947 CCND3P30281 292 aaPredicted RBP19.93■□□□□ 0.78
VIM-205ENST00000485947 CCDC178Q5BJE1 867 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms