RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ADAMTS5Q9UNA0 930 aa14.72□□□□□ -0.05
PTCD1-205ENST00000485746 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.05
PTCD1-205ENST00000485746 FDX1P10109 184 aa14.71□□□□□ -0.05
PTCD1-205ENST00000485746 ADORA2AP29274 412 aa14.71□□□□□ -0.05
PTCD1-205ENST00000485746 GRB14Q14449 540 aa14.71□□□□□ -0.05
PTCD1-205ENST00000485746 KCTD2Q14681 263 aa14.71□□□□□ -0.05
PTCD1-205ENST00000485746 CCL14Q16627 93 aa14.71□□□□□ -0.05
PTCD1-205ENST00000485746 RALYLQ86SE5 291 aaKnown RBP14.71□□□□□ -0.05
PTCD1-205ENST00000485746 USP6NLQ92738 828 aa14.71□□□□□ -0.05
PTCD1-205ENST00000485746 TEX13BQ9BXU2 312 aa14.71□□□□□ -0.05
PTCD1-205ENST00000485746 KAT14Q9H8E8 782 aa14.71□□□□□ -0.05
PTCD1-205ENST00000485746 RAVER2Q9HCJ3 691 aaKnown RBP14.71□□□□□ -0.05
PTCD1-205ENST00000485746 GPCPD1Q9NPB8 672 aa14.71□□□□□ -0.05
PTCD1-205ENST00000485746 GJB1P08034 283 aa14.7□□□□□ -0.06
PTCD1-205ENST00000485746 TRIM32Q13049 653 aa14.7□□□□□ -0.06
PTCD1-205ENST00000485746 TRIB2Q92519 343 aa14.7□□□□□ -0.06
PTCD1-205ENST00000485746 DEFB118Q96PH6 123 aa14.7□□□□□ -0.06
PTCD1-205ENST00000485746 ZSCAN10Q96SZ4 725 aaPredicted RBP14.7□□□□□ -0.06
PTCD1-205ENST00000485746 PPP4R2Q9NY27 417 aa14.7□□□□□ -0.06
PTCD1-205ENST00000485746 ZSWIM5Q9P217 1185 aa14.7□□□□□ -0.06
PTCD1-205ENST00000485746 FRMPD2Q68DX3 1309 aaPredicted RBP14.69□□□□□ -0.06
PTCD1-205ENST00000485746 RPTORQ8N122 1335 aa14.69□□□□□ -0.06
PTCD1-205ENST00000485746 PRKAR2AP13861 404 aaKnown RBP14.69□□□□□ -0.06
PTCD1-205ENST00000485746 CCDC174Q6PII3 467 aa14.69□□□□□ -0.06
PTCD1-205ENST00000485746 DGKHQ86XP1 1220 aa14.69□□□□□ -0.06
PTCD1-205ENST00000485746 ABRAQ8N0Z2 381 aa14.69□□□□□ -0.06
PTCD1-205ENST00000485746 NPLOC4Q8TAT6 608 aa14.69□□□□□ -0.06
PTCD1-205ENST00000485746 U2AF1L4Q8WU68 220 aaKnown RBP14.69□□□□□ -0.06
PTCD1-205ENST00000485746 DDX11Q96FC9 970 aa14.69□□□□□ -0.06
PTCD1-205ENST00000485746 ESYT1Q9BSJ8 1104 aa14.69□□□□□ -0.06
PTCD1-205ENST00000485746 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.69□□□□□ -0.06
PTCD1-205ENST00000485746 SLC38A10Q9HBR0 1119 aa14.69□□□□□ -0.06
PTCD1-205ENST00000485746 ANO2Q9NQ90 1003 aa14.69□□□□□ -0.06
PTCD1-205ENST00000485746 ZNF214Q9UL59 606 aaPredicted RBP14.69□□□□□ -0.06
PTCD1-205ENST00000485746 RBM8AQ9Y5S9 174 aaKnown RBP14.69□□□□□ -0.06
PTCD1-205ENST00000485746 MGAMO43451 1857 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 ERICH2A1L162 156 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 PLA2G6O60733 806 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 CDC45O75419 566 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 SGPL1O95470 568 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 CNGA1P29973 690 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 SLC16A2P36021 539 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 GJA8P48165 433 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 NOVP48745 357 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 SNAP25P60880 206 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 CACNB2Q08289 660 aaPredicted RBP14.68□□□□□ -0.06
PTCD1-205ENST00000485746 IFIT1BQ5T764 474 aaKnown RBP14.68□□□□□ -0.06
PTCD1-205ENST00000485746 SYDE2Q5VT97 1194 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 ERICH6BQ5W0A0 696 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 REPS2Q8NFH8 660 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 MAP4K1Q92918 833 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 HOMER2Q9NSB8 354 aa14.68□□□□□ -0.06
PTCD1-205ENST00000485746 GREB1LQ9C091 1923 aaPredicted RBP14.67□□□□□ -0.06
PTCD1-205ENST00000485746 E7EWF7 191 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 ATP2A1O14983 1001 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 COBLO75128 1261 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 CYP21A2P08686 494 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 HOXC6P09630 235 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 OAZ1P54368 228 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 SART3Q15020 963 aaKnown RBP14.67□□□□□ -0.06
PTCD1-205ENST00000485746 TTBK2Q6IQ55 1244 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 RASGRP2Q7LDG7 609 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 ANKRD35Q8N283 1001 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 PNMA1Q8ND90 353 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 CHST13Q8NET6 341 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 NCOA7Q8NI08 942 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 FBXO40Q9UH90 709 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 PRR12Q9ULL5 1215 aa14.67□□□□□ -0.06
PTCD1-205ENST00000485746 TNKSO95271 1327 aa14.66□□□□□ -0.06
PTCD1-205ENST00000485746 IFIT3O14879 490 aaKnown RBP14.66□□□□□ -0.06
PTCD1-205ENST00000485746 PGK2P07205 417 aa14.66□□□□□ -0.06
PTCD1-205ENST00000485746 PDHBP11177 359 aa14.66□□□□□ -0.06
PTCD1-205ENST00000485746 ALAS1P13196 640 aa14.66□□□□□ -0.06
PTCD1-205ENST00000485746 CAPN2P17655 700 aa14.66□□□□□ -0.06
PTCD1-205ENST00000485746 CYP2C19P33261 490 aa14.66□□□□□ -0.06
PTCD1-205ENST00000485746 FLRT1Q9NZU1 646 aa14.66□□□□□ -0.06
PTCD1-205ENST00000485746 RIPK3Q9Y572 518 aa14.66□□□□□ -0.06
PTCD1-205ENST00000485746 DHX16O60231 1041 aaKnown RBP14.65□□□□□ -0.06
PTCD1-205ENST00000485746 CCND3P30281 292 aaPredicted RBP14.65□□□□□ -0.06
PTCD1-205ENST00000485746 ZNF543Q08ER8 600 aa14.65□□□□□ -0.06
PTCD1-205ENST00000485746 TKFCQ3LXA3 575 aa14.65□□□□□ -0.06
PTCD1-205ENST00000485746 GPATCH4Q5T3I0 446 aaKnown RBP14.65□□□□□ -0.06
PTCD1-205ENST00000485746 OLFML2BQ68BL8 750 aa14.65□□□□□ -0.06
PTCD1-205ENST00000485746 CYB5R4Q7L1T6 521 aa14.65□□□□□ -0.06
PTCD1-205ENST00000485746 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
PTCD1-205ENST00000485746 ANKS1AQ92625 1134 aa14.65□□□□□ -0.06
PTCD1-205ENST00000485746 AGBL1Q96MI9 1066 aa14.65□□□□□ -0.06
PTCD1-205ENST00000485746 TRERF1Q96PN7 1200 aa14.65□□□□□ -0.06
PTCD1-205ENST00000485746 LSG1Q9H089 658 aaKnown RBP14.65□□□□□ -0.06
PTCD1-205ENST00000485746 ACAD9Q9H845 621 aa14.65□□□□□ -0.06
PTCD1-205ENST00000485746 PAK6Q9NQU5 681 aaPredicted RBP14.65□□□□□ -0.06
PTCD1-205ENST00000485746 CCPG1Q9ULG6 757 aa14.65□□□□□ -0.06
PTCD1-205ENST00000485746 SLC27A2O14975 620 aa14.64□□□□□ -0.07
PTCD1-205ENST00000485746 FARP2O94887 1054 aaPredicted RBP14.64□□□□□ -0.07
PTCD1-205ENST00000485746 PARP1P09874 1014 aaKnown RBP14.64□□□□□ -0.07
PTCD1-205ENST00000485746 GOLGA8HP0CJ92 632 aa14.64□□□□□ -0.07
PTCD1-205ENST00000485746 WTAPQ15007 396 aa14.64□□□□□ -0.07
PTCD1-205ENST00000485746 MAP3K21Q5TCX8 1036 aa14.64□□□□□ -0.07
PTCD1-205ENST00000485746 RNF20Q5VTR2 975 aa14.64□□□□□ -0.07
PTCD1-205ENST00000485746 BTNL9Q6UXG8 535 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms