RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 FMNL1O95466 1100 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-208ENST00000485618 SLC25A27O95847 323 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 CYP2C8P10632 490 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 MAPK4P31152 587 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 DSG3P32926 999 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 FXR1P51114 621 aaKnown RBP eCLIP9.64□□□□□ -0.87
SF3A1-208ENST00000485618 OAZ1P54368 228 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 PRMT2P55345 433 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 FCGRTP55899 365 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 LACTBP83111 547 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-208ENST00000485618 SEC23AQ15436 765 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 C8orf34Q49A92 452 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-208ENST00000485618 C17orf99Q6UX52 265 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 LBX2Q6XYB7 198 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 STOX1Q6ZVD7 989 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 CHST3Q7LGC8 479 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 CLEC10AQ8IUN9 316 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 RASEFQ8IZ41 740 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 FBXL16Q8N461 479 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 ANKRD13CQ8N6S4 541 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 COA7Q96BR5 231 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 C22orf23Q9BZE7 217 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 ZSWIM6Q9HCJ5 1215 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 PPP1R9AQ9ULJ8 1098 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 TACC3Q9Y6A5 838 aa9.64□□□□□ -0.87
SF3A1-208ENST00000485618 SH2B2O14492 632 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-208ENST00000485618 STRNO43815 780 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 DHX16O60231 1041 aaKnown RBP9.63□□□□□ -0.87
SF3A1-208ENST00000485618 PDHBP11177 359 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 RPS6KB1P23443 525 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 RCAN1P53805 252 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 EXOSC10Q01780 885 aaKnown RBP9.63□□□□□ -0.87
SF3A1-208ENST00000485618 ZNF543Q08ER8 600 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 CPLX2Q6PUV4 134 aaKnown RBP9.63□□□□□ -0.87
SF3A1-208ENST00000485618 SGMS1Q86VZ5 419 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 NUP133Q8WUM0 1156 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 PAGR1Q9BTK6 254 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 MROH8Q9H579 483 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 PDRG1Q9NUG6 133 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 RBM28Q9NW13 759 aaKnown RBP9.63□□□□□ -0.87
SF3A1-208ENST00000485618 SLC5A4Q9NY91 659 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 MORF4L1Q9UBU8 362 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 CPA4Q9UI42 421 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 NAP1L2Q9ULW6 460 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-208ENST00000485618 COLQQ9Y215 455 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-208ENST00000485618 IVNS1ABPQ9Y6Y0 642 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 PHIPQ8WWQ0 1821 aa9.63□□□□□ -0.87
SF3A1-208ENST00000485618 SPDYE16A6NNV3 312 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-208ENST00000485618 VWA5AO00534 786 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 ZBTB43O43298 467 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 SNHG28P0DPA3 235 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 SMARCA1P28370 1054 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 STAT3P40763 770 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 ERVK-9P63128 1117 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 ERVK-24P63145 666 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 PLS1Q14651 629 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 TKFCQ3LXA3 575 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 SYDE2Q5VT97 1194 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 BTNL9Q6UXG8 535 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 Q6ZUG5 572 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 KCTD1Q719H9 257 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 ZNF654Q8IZM8 581 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 SHCBP1Q8NEM2 672 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 NUP88Q99567 741 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-208ENST00000485618 TEX13BQ9BXU2 312 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 LY9Q9HBG7 655 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 GPCPD1Q9NPB8 672 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 FBXO40Q9UH90 709 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 ADAMTS5Q9UNA0 930 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 TAF6LQ9Y6J9 622 aa9.62□□□□□ -0.87
SF3A1-208ENST00000485618 KIAA0100Q14667 2235 aaKnown RBP9.62□□□□□ -0.87
SF3A1-208ENST00000485618 MYH4Q9Y623 1939 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 KLRF2D3W0D1 207 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 H0YGN5 161 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 TNPO2O14787 897 aaKnown RBP9.61□□□□□ -0.87
SF3A1-208ENST00000485618 ATP2A1O14983 1001 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 ST18O60284 1047 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 BCRP11274 1271 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 PSMC4P43686 418 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 ANTXR2P58335 489 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 GRM4Q14833 912 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 ADCK5Q3MIX3 580 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 KIAA1755Q5JYT7 1200 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 FANCBQ8NB91 859 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 RAET1EQ8TD07 263 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 BACH2Q9BYV9 841 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 SPATC1LQ9H0A9 340 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 ALDH8A1Q9H2A2 487 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-208ENST00000485618 SLC38A10Q9HBR0 1119 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 RBM27Q9P2N5 1060 aaKnown RBP9.61□□□□□ -0.87
SF3A1-208ENST00000485618 RBPJLQ9UBG7 517 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 SEC63Q9UGP8 760 aaKnown RBP9.61□□□□□ -0.87
SF3A1-208ENST00000485618 PRR12Q9ULL5 1215 aa9.61□□□□□ -0.87
SF3A1-208ENST00000485618 GREB1LQ9C091 1923 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-208ENST00000485618 LOC285556D6RIA3 1793 aa9.6□□□□□ -0.87
SF3A1-208ENST00000485618 FRMPD2Q68DX3 1309 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-208ENST00000485618 KLF18A0A0U1RQI7 1052 aa9.6□□□□□ -0.87
SF3A1-208ENST00000485618 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms