RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	ZAR1	Q86SH2	424 aa		5.79	□□□□□ -1.48
FN1-222	ENST00000485567	GTF2IRD2	Q86UP8	949 aa		5.79	□□□□□ -1.48
FN1-222	ENST00000485567	FIBCD1	Q8N539	461 aa		5.79	□□□□□ -1.48
FN1-222	ENST00000485567	DTWD2	Q8NBA8	298 aa		5.79	□□□□□ -1.48
FN1-222	ENST00000485567	ADCY4	Q8NFM4	1077 aa		5.79	□□□□□ -1.48
FN1-222	ENST00000485567	PIWIL2	Q8TC59	973 aa	Known RBP	5.79	□□□□□ -1.48
FN1-222	ENST00000485567		Q96M66	194 aa		5.79	□□□□□ -1.48
FN1-222	ENST00000485567	SF3B6	Q9Y3B4	125 aa	Known RBP	5.79	□□□□□ -1.48
FN1-222	ENST00000485567	FAM181B	A6NEQ2	426 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	TBX1	O43435	398 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	DLX3	O60479	287 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	CP	P00450	1065 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	SCG5	P05408	212 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	CDK11B	P21127	795 aa	Known RBP	5.78	□□□□□ -1.48
FN1-222	ENST00000485567	GRIA2	P42262	883 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	AMPD3	Q01432	767 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	CYP27A1	Q02318	531 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	SNW1	Q13573	536 aa	Known RBP	5.78	□□□□□ -1.48
FN1-222	ENST00000485567	CBX2	Q14781	532 aa	Predicted RBP	5.78	□□□□□ -1.48
FN1-222	ENST00000485567	TRIM61	Q5EBN2	209 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	BTN2A2	Q8WVV5	523 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	BRF1	Q92994	677 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	HEXIM2	Q96MH2	286 aa	Known RBP	5.78	□□□□□ -1.48
FN1-222	ENST00000485567	IER2	Q9BTL4	223 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	LGR4	Q9BXB1	951 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.78	□□□□□ -1.48
FN1-222	ENST00000485567	NKX2-4	Q9H2Z4	354 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	NOL6	Q9H6R4	1146 aa	Known RBP	5.78	□□□□□ -1.48
FN1-222	ENST00000485567	CYP26B1	Q9NR63	512 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	CHST7	Q9NS84	486 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	INTS7	Q9NVH2	962 aa	Known RBP	5.78	□□□□□ -1.48
FN1-222	ENST00000485567	GFOD1	Q9NXC2	390 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	RAX	Q9Y2V3	346 aa		5.78	□□□□□ -1.48
FN1-222	ENST00000485567	KCNH1	O95259	989 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	RAPGEF3	O95398	923 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	GSN	P06396	782 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	ITIH2	P19823	946 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	GFRA1	P56159	465 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	GABRE	P78334	506 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	NMI	Q13287	307 aa	Predicted RBP	5.77	□□□□□ -1.49
FN1-222	ENST00000485567	PPP2R5D	Q14738	602 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	C21orf62-AS1	Q17RA5	79 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	TMC3	Q7Z5M5	1100 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	CD163	Q86VB7	1156 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	DHX37	Q8IY37	1157 aa	Known RBP	5.77	□□□□□ -1.49
FN1-222	ENST00000485567	DAGLB	Q8NCG7	672 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	KCTD13	Q8WZ19	329 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	TBC1D32	Q96NH3	1257 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	CLUHP3	Q96NS8	147 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	GPR62	Q9BZJ7	368 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	C7orf69	Q9H7B7	122 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567	STOML1	Q9UBI4	398 aa		5.77	□□□□□ -1.49
FN1-222	ENST00000485567		A0A087X0B3	334 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	C1QTNF9B	B2RNN3	333 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	RNF225	M0QZC1	329 aa	Predicted RBP	5.76	□□□□□ -1.49
FN1-222	ENST00000485567	EFCAB14	O75071	495 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	PRAMEF1	O95521	474 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	CBX7	O95931	251 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	C6orf222	P0C671	652 aa	Predicted RBP	5.76	□□□□□ -1.49
FN1-222	ENST00000485567	SRF	P11831	508 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	ADM	P35318	185 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	CHRNA4	P43681	627 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	AMPD2	Q01433	879 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	POU4F1	Q01851	419 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	THNSL2	Q86YJ6	484 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	ZNF655	Q8N720	491 aa	Predicted RBP	5.76	□□□□□ -1.49
FN1-222	ENST00000485567	DSCC1	Q9BVC3	393 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	CAAP1	Q9H8G2	361 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	MKNK2	Q9HBH9	465 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.76	□□□□□ -1.49
FN1-222	ENST00000485567	CAPN6	Q9Y6Q1	641 aa		5.76	□□□□□ -1.49
FN1-222	ENST00000485567	HMX2	A2RU54	273 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	VAMP4	O75379	141 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	MYCLP1	P12525	358 aa	Predicted RBP	5.75	□□□□□ -1.49
FN1-222	ENST00000485567	GATA4	P43694	442 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	NOP2	P46087	812 aa	Known RBP	5.75	□□□□□ -1.49
FN1-222	ENST00000485567	TNK2	Q07912	1038 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	SLC35F1	Q5T1Q4	408 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	DUSP27	Q5VZP5	1158 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	RNF43	Q68DV7	783 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	MFSD4A	Q8N468	514 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	GSTCD	Q8NEC7	633 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	CHAC2	Q8WUX2	184 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	PTPRN2	Q92932	1015 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	DCAF5	Q96JK2	942 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	ZDHHC15	Q96MV8	337 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	HDAC8	Q9BY41	377 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	MAPRE3	Q9UPY8	281 aa		5.75	□□□□□ -1.49
FN1-222	ENST00000485567	GNAT3	A8MTJ3	354 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	PRR33	A8MZF0	331 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567		H0Y8X5	98 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	IRS4	O14654	1257 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-222	ENST00000485567	SNRPB2	P08579	225 aa	Known RBP	5.74	□□□□□ -1.49
FN1-222	ENST00000485567	SOX5	P35711	763 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	STAT3	P40763	770 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	TESK1	Q15569	626 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	SF1	Q15637	639 aa	Known RBP	5.74	□□□□□ -1.49
FN1-222	ENST00000485567	CLEC16A	Q2KHT3	1053 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	CWF19L1	Q69YN2	538 aa	Known RBP	5.74	□□□□□ -1.49
FN1-222	ENST00000485567	PRR23C	Q6ZRP0	262 aa		5.74	□□□□□ -1.49

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