RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 DCAF4Q8WV16 495 aa21.55■■□□□ 1.04
ERCC2-205ENST00000485403 KAT14Q9H8E8 782 aa21.55■■□□□ 1.04
ERCC2-205ENST00000485403 FOXD4L1Q9NU39 408 aa21.55■■□□□ 1.04
ERCC2-205ENST00000485403 CPA4Q9UI42 421 aa21.55■■□□□ 1.04
ERCC2-205ENST00000485403 COL11A1P12107 1806 aaPredicted RBP21.54■■□□□ 1.04
ERCC2-205ENST00000485403 ZBTB43O43298 467 aa21.54■■□□□ 1.04
ERCC2-205ENST00000485403 FLOT1O75955 427 aa21.54■■□□□ 1.04
ERCC2-205ENST00000485403 PDHBP11177 359 aa21.54■■□□□ 1.04
ERCC2-205ENST00000485403 DSG3P32926 999 aa21.54■■□□□ 1.04
ERCC2-205ENST00000485403 RASGRP2Q7LDG7 609 aa21.54■■□□□ 1.04
ERCC2-205ENST00000485403 CATIPQ7Z7H3 387 aa21.54■■□□□ 1.04
ERCC2-205ENST00000485403 ZNF654Q8IZM8 581 aa21.54■■□□□ 1.04
ERCC2-205ENST00000485403 ZNF296Q8WUU4 475 aaPredicted RBP21.54■■□□□ 1.04
ERCC2-205ENST00000485403 HOXC10Q9NYD6 342 aa21.54■■□□□ 1.04
ERCC2-205ENST00000485403 CCT2P78371 535 aaKnown RBP21.53■■□□□ 1.04
ERCC2-205ENST00000485403 FAM110CQ1W6H9 321 aa21.53■■□□□ 1.04
ERCC2-205ENST00000485403 MICU3Q86XE3 530 aa21.53■■□□□ 1.04
ERCC2-205ENST00000485403 GTF3C6Q969F1 213 aa21.53■■□□□ 1.04
ERCC2-205ENST00000485403 MYL10Q9BUA6 226 aa21.53■■□□□ 1.04
ERCC2-205ENST00000485403 FBXO28Q9NVF7 368 aa21.53■■□□□ 1.04
ERCC2-205ENST00000485403 MORF4L1Q9UBU8 362 aa21.53■■□□□ 1.04
ERCC2-205ENST00000485403 PPP1R9AQ9ULJ8 1098 aa21.53■■□□□ 1.04
ERCC2-205ENST00000485403 ADAMTS5Q9UNA0 930 aa21.53■■□□□ 1.04
ERCC2-205ENST00000485403 HPS5Q9UPZ3 1129 aa21.53■■□□□ 1.04
ERCC2-205ENST00000485403 PLA2G6O60733 806 aa21.52■■□□□ 1.04
ERCC2-205ENST00000485403 METAP2P50579 478 aaKnown RBP eCLIP21.52■■□□□ 1.04
ERCC2-205ENST00000485403 SP3Q02447 781 aa21.52■■□□□ 1.04
ERCC2-205ENST00000485403 ST3GAL1Q11201 340 aa21.52■■□□□ 1.04
ERCC2-205ENST00000485403 SCRN1Q12765 414 aa21.52■■□□□ 1.04
ERCC2-205ENST00000485403 NUP133Q8WUM0 1156 aa21.52■■□□□ 1.04
ERCC2-205ENST00000485403 RBPJLQ9UBG7 517 aa21.52■■□□□ 1.04
ERCC2-205ENST00000485403 FEM1BQ9UK73 627 aa21.52■■□□□ 1.04
ERCC2-205ENST00000485403 DOCK3Q8IZD9 2030 aa21.52■■□□□ 1.04
ERCC2-205ENST00000485403 MGAMO43451 1857 aa21.52■■□□□ 1.04
ERCC2-205ENST00000485403 GOLGA8AA7E2F4 631 aa21.51■■□□□ 1.03
ERCC2-205ENST00000485403 FKTNO75072 461 aa21.51■■□□□ 1.03
ERCC2-205ENST00000485403 DDAH1O94760 285 aa21.51■■□□□ 1.03
ERCC2-205ENST00000485403 ANKRD13CQ8N6S4 541 aa21.51■■□□□ 1.03
ERCC2-205ENST00000485403 CHMP4CQ96CF2 233 aa21.51■■□□□ 1.03
ERCC2-205ENST00000485403 INTS4Q96HW7 963 aaKnown RBP21.51■■□□□ 1.03
ERCC2-205ENST00000485403 SLF1Q9BQI6 1058 aa21.51■■□□□ 1.03
ERCC2-205ENST00000485403 TXNRD2Q9NNW7 524 aa21.51■■□□□ 1.03
ERCC2-205ENST00000485403 PRDM10Q9NQV6 1147 aa21.51■■□□□ 1.03
ERCC2-205ENST00000485403 RABGAP1Q9Y3P9 1069 aa21.51■■□□□ 1.03
ERCC2-205ENST00000485403 CNMDO75829 334 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 CALM1P0DP23 149 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 CALM2P0DP24 149 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 CALM3P0DP25 149 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 RXRAP19793 462 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 RCAN1P53805 252 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 ZNF543Q08ER8 600 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 KCTD1Q719H9 257 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 ATG4CQ96DT6 458 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 NCOA5Q9HCD5 579 aaKnown RBP21.5■■□□□ 1.03
ERCC2-205ENST00000485403 HTTP42858 3142 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 TMEM232C9JQI7 657 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 STAT2P52630 851 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 LACTBP83111 547 aaPredicted RBP21.5■■□□□ 1.03
ERCC2-205ENST00000485403 CCDC144CPQ8IYA2 1237 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 MB21D1Q8N884 522 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 PRPF38AQ8NAV1 312 aaKnown RBP21.5■■□□□ 1.03
ERCC2-205ENST00000485403 MTMR7Q9Y216 660 aa21.5■■□□□ 1.03
ERCC2-205ENST00000485403 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.5■■□□□ 1.03
ERCC2-205ENST00000485403 ZSWIM8A7E2V4 1837 aa21.49■■□□□ 1.03
ERCC2-205ENST00000485403 TROAPQ12815 778 aa21.49■■□□□ 1.03
ERCC2-205ENST00000485403 RTN1Q16799 776 aa21.49■■□□□ 1.03
ERCC2-205ENST00000485403 CCDC96Q2M329 555 aa21.49■■□□□ 1.03
ERCC2-205ENST00000485403 BTNL9Q6UXG8 535 aa21.49■■□□□ 1.03
ERCC2-205ENST00000485403 FAM160B2Q86V87 743 aa21.49■■□□□ 1.03
ERCC2-205ENST00000485403 CHURC1Q8WUH1 139 aa21.49■■□□□ 1.03
ERCC2-205ENST00000485403 BTBD7Q9P203 1132 aa21.49■■□□□ 1.03
ERCC2-205ENST00000485403 VWA5AO00534 786 aa21.48■■□□□ 1.03
ERCC2-205ENST00000485403 DHX16O60231 1041 aaKnown RBP21.48■■□□□ 1.03
ERCC2-205ENST00000485403 PEX10O60683 326 aa21.48■■□□□ 1.03
ERCC2-205ENST00000485403 ERVK-9P63128 1117 aa21.48■■□□□ 1.03
ERCC2-205ENST00000485403 ERVK-24P63145 666 aa21.48■■□□□ 1.03
ERCC2-205ENST00000485403 GPATCH4Q5T3I0 446 aaKnown RBP21.48■■□□□ 1.03
ERCC2-205ENST00000485403 FANCBQ8NB91 859 aa21.48■■□□□ 1.03
ERCC2-205ENST00000485403 REPS2Q8NFH8 660 aa21.48■■□□□ 1.03
ERCC2-205ENST00000485403 GPRC5AQ8NFJ5 357 aa21.48■■□□□ 1.03
ERCC2-205ENST00000485403 FRMPD2Q68DX3 1309 aaPredicted RBP21.47■■□□□ 1.03
ERCC2-205ENST00000485403 CPLX1O14810 134 aa21.47■■□□□ 1.03
ERCC2-205ENST00000485403 CAP1Q01518 475 aa21.47■■□□□ 1.03
ERCC2-205ENST00000485403 ASPRV1Q53RT3 343 aa21.47■■□□□ 1.03
ERCC2-205ENST00000485403 ERO1AQ96HE7 468 aa21.47■■□□□ 1.03
ERCC2-205ENST00000485403 PAGR1Q9BTK6 254 aa21.47■■□□□ 1.03
ERCC2-205ENST00000485403 SMC3Q9UQE7 1217 aa21.47■■□□□ 1.03
ERCC2-205ENST00000485403 NID2Q14112 1375 aa21.47■■□□□ 1.03
ERCC2-205ENST00000485403 BAZ2BQ9UIF8 2168 aaKnown RBP21.47■■□□□ 1.03
ERCC2-205ENST00000485403 CCDC196A0A1B0GTZ2 297 aa21.46■■□□□ 1.03
ERCC2-205ENST00000485403 CDC27P30260 824 aa21.46■■□□□ 1.03
ERCC2-205ENST00000485403 Q3C1V9 767 aa21.46■■□□□ 1.03
ERCC2-205ENST00000485403 TTBK2Q6IQ55 1244 aa21.46■■□□□ 1.03
ERCC2-205ENST00000485403 CTCFLQ8NI51 663 aaPredicted RBP21.46■■□□□ 1.03
ERCC2-205ENST00000485403 LLPHQ9BRT6 129 aaKnown RBP21.46■■□□□ 1.03
ERCC2-205ENST00000485403 CWC22Q9HCG8 908 aaKnown RBP21.46■■□□□ 1.03
ERCC2-205ENST00000485403 ISY1Q9ULR0 285 aaKnown RBP21.46■■□□□ 1.03
ERCC2-205ENST00000485403 PARP1P09874 1014 aaKnown RBP21.45■■□□□ 1.02
ERCC2-205ENST00000485403 FDX1P10109 184 aa21.45■■□□□ 1.02
ERCC2-205ENST00000485403 CTGFP29279 349 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms