RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 FAM173BQ6P4H8 233 aa20.17■□□□□ 0.82
CCDC78-214ENST00000485091 SHISA4Q96DD7 197 aa20.17■□□□□ 0.82
CCDC78-214ENST00000485091 EMILIN3Q9NT22 766 aa20.17■□□□□ 0.82
CCDC78-214ENST00000485091 OTOFQ9HC10 1997 aa20.17■□□□□ 0.82
CCDC78-214ENST00000485091 USP14P54578 494 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 MAP3K11Q16584 847 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 AFG3L2Q9Y4W6 797 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 CELF2O95319 508 aaKnown RBP20.16■□□□□ 0.82
CCDC78-214ENST00000485091 STAT2P52630 851 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 HMGCS2P54868 508 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 RESTQ13127 1097 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 GNL2Q13823 731 aaKnown RBP20.16■□□□□ 0.82
CCDC78-214ENST00000485091 SYDE2Q5VT97 1194 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 WWC2Q6AWC2 1192 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 CHADLQ6NUI6 762 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 KIFC2Q96AC6 838 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 OTUD5Q96G74 571 aa20.16■□□□□ 0.82
CCDC78-214ENST00000485091 FBXO28Q9NVF7 368 aa20.15■□□□□ 0.82
CCDC78-214ENST00000485091 PAPPA2Q9BXP8 1791 aa20.14■□□□□ 0.82
CCDC78-214ENST00000485091 KIF28PB7ZC32 967 aa20.14■□□□□ 0.81
CCDC78-214ENST00000485091 WDR46O15213 610 aaKnown RBP20.14■□□□□ 0.81
CCDC78-214ENST00000485091 BAG4O95429 457 aaKnown RBP20.14■□□□□ 0.81
CCDC78-214ENST00000485091 MMP1P03956 469 aa20.14■□□□□ 0.81
CCDC78-214ENST00000485091 NLRP5P59047 1200 aa20.14■□□□□ 0.81
CCDC78-214ENST00000485091 RBM46Q8TBY0 533 aaKnown RBP20.14■□□□□ 0.81
CCDC78-214ENST00000485091 LPAR1Q92633 364 aa20.14■□□□□ 0.81
CCDC78-214ENST00000485091 COA7Q96BR5 231 aa20.14■□□□□ 0.81
CCDC78-214ENST00000485091 GBP4Q96PP9 640 aa20.14■□□□□ 0.81
CCDC78-214ENST00000485091 TANGO6Q9C0B7 1094 aa20.14■□□□□ 0.81
CCDC78-214ENST00000485091 PRR12Q9ULL5 1215 aa20.14■□□□□ 0.81
CCDC78-214ENST00000485091 PHIPQ8WWQ0 1821 aa20.14■□□□□ 0.81
CCDC78-214ENST00000485091 PNMA6FA0A0J9YX94 578 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 C19orf81C9J6K1 198 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 VCAM1P19320 739 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 KIF23Q02241 960 aaPredicted RBP20.13■□□□□ 0.81
CCDC78-214ENST00000485091 SAFBQ15424 915 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCDC78-214ENST00000485091 CDC37Q16543 378 aaPredicted RBP20.13■□□□□ 0.81
CCDC78-214ENST00000485091 BTNL9Q6UXG8 535 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 PHF20Q9BVI0 1012 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 ZSCAN16Q9H4T2 348 aaPredicted RBP20.13■□□□□ 0.81
CCDC78-214ENST00000485091 GBA2Q9HCG7 927 aaPredicted RBP20.13■□□□□ 0.81
CCDC78-214ENST00000485091 TMOD4Q9NZQ9 345 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 FEM1BQ9UK73 627 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 ZBTB5O15062 677 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 NAPAP54920 295 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 QRICH1Q2TAL8 776 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 TYW1BQ6NUM6 668 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 ERO1BQ86YB8 467 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 DIS3L2Q8IYB7 885 aaKnown RBP20.13■□□□□ 0.81
CCDC78-214ENST00000485091 CHURC1Q8WUH1 139 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 RPAP3Q9H6T3 665 aaPredicted RBP20.13■□□□□ 0.81
CCDC78-214ENST00000485091 BARHL2Q9NY43 387 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 ATP6V1DQ9Y5K8 247 aa20.13■□□□□ 0.81
CCDC78-214ENST00000485091 BTBD18B2RXH4 712 aa20.12■□□□□ 0.81
CCDC78-214ENST00000485091 STXBP3O00186 592 aa20.12■□□□□ 0.81
CCDC78-214ENST00000485091 ITGBL1O95965 494 aaPredicted RBP20.12■□□□□ 0.81
CCDC78-214ENST00000485091 NCLP19338 710 aaKnown RBP20.12■□□□□ 0.81
CCDC78-214ENST00000485091 DNM1Q05193 864 aaKnown RBP20.12■□□□□ 0.81
CCDC78-214ENST00000485091 PPATQ06203 517 aa20.12■□□□□ 0.81
CCDC78-214ENST00000485091 LDLRAD1Q5T700 205 aa20.12■□□□□ 0.81
CCDC78-214ENST00000485091 C2orf69Q8N8R5 385 aa20.12■□□□□ 0.81
CCDC78-214ENST00000485091 OXER1Q8TDS5 423 aa20.12■□□□□ 0.81
CCDC78-214ENST00000485091 OPTNQ96CV9 577 aa20.12■□□□□ 0.81
CCDC78-214ENST00000485091 SPDYE5A6NIY4 337 aa20.11■□□□□ 0.81
CCDC78-214ENST00000485091 IRF6O14896 467 aa20.11■□□□□ 0.81
CCDC78-214ENST00000485091 PPP1R11O60927 126 aaPredicted RBP20.11■□□□□ 0.81
CCDC78-214ENST00000485091 NFKBIBQ15653 356 aa20.11■□□□□ 0.81
CCDC78-214ENST00000485091 FAM160B2Q86V87 743 aa20.11■□□□□ 0.81
CCDC78-214ENST00000485091 MTMR8Q96EF0 704 aa20.11■□□□□ 0.81
CCDC78-214ENST00000485091 SLC10A4Q96EP9 437 aa20.11■□□□□ 0.81
CCDC78-214ENST00000485091 FLOT1O75955 427 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 KRT2P35908 639 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 NR5A1Q13285 461 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 CCDC174Q6PII3 467 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 RGS22Q8NE09 1264 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 CCDC148Q8NFR7 591 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 SH3GLB2Q9NR46 395 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 ADAMTS3O15072 1205 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 CST9Q5W186 159 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 SMC1BQ8NDV3 1235 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 BRMS1Q9HCU9 246 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 CNPY2Q9Y2B0 182 aa20.1■□□□□ 0.81
CCDC78-214ENST00000485091 SMCO2A6NFE2 343 aa20.09■□□□□ 0.81
CCDC78-214ENST00000485091 TAL1P17542 331 aaPredicted RBP20.09■□□□□ 0.81
CCDC78-214ENST00000485091 FSTL1Q12841 308 aa20.09■□□□□ 0.81
CCDC78-214ENST00000485091 USH1GQ495M9 461 aa20.09■□□□□ 0.81
CCDC78-214ENST00000485091 GADL1Q6ZQY3 521 aa20.09■□□□□ 0.81
CCDC78-214ENST00000485091 C12orf42Q96LP6 360 aa20.09■□□□□ 0.81
CCDC78-214ENST00000485091 SLF1Q9BQI6 1058 aa20.09■□□□□ 0.81
CCDC78-214ENST00000485091 GDPD2Q9HCC8 539 aa20.09■□□□□ 0.81
CCDC78-214ENST00000485091 TFIP11Q9UBB9 837 aaKnown RBP20.09■□□□□ 0.81
CCDC78-214ENST00000485091 PLA2G6O60733 806 aa20.08■□□□□ 0.81
CCDC78-214ENST00000485091 MCM4P33991 863 aa20.08■□□□□ 0.81
CCDC78-214ENST00000485091 FKBP1BP68106 108 aa20.08■□□□□ 0.81
CCDC78-214ENST00000485091 PPIL2Q13356 520 aa20.08■□□□□ 0.81
CCDC78-214ENST00000485091 NPY5RQ15761 445 aa20.08■□□□□ 0.81
CCDC78-214ENST00000485091 SH3D19Q5HYK7 790 aa20.08■□□□□ 0.81
CCDC78-214ENST00000485091 CCDC12Q8WUD4 166 aaPredicted RBP20.08■□□□□ 0.81
CCDC78-214ENST00000485091 U2AF2P26368 475 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCDC78-214ENST00000485091 CALML3P27482 149 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms