RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 PARP14Q460N5 1801 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 MYADML2A6NDP7 307 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 WDR46O15213 610 aaKnown RBP18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 PRKAB2O43741 272 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 TMEM240Q5SV17 173 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 MFSD5Q6N075 450 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ADAMTS19Q8TE59 1207 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 NUP133Q8WUM0 1156 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ATXN2LQ8WWM7 1075 aaKnown RBP18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ASB2Q96Q27 587 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 HAUS7Q99871 368 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 SWAP70Q9UH65 585 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ADAMTS5Q9UNA0 930 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 CNPY2Q9Y2B0 182 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 DIS3Q9Y2L1 958 aaKnown RBP18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ROBO3Q96MS0 1386 aa18.42■□□□□ 0.54
HLA-DQB1-208ENST00000484729 PLXNA1Q9UIW2 1896 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ACRP10323 421 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 CSF2RAP15509 400 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 STAT3P40763 770 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ADGRE1Q14246 886 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 AMOTL1Q8IY63 956 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 KLHDC9Q8NEP7 349 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 SH2D4AQ9H788 454 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ATP8A2Q9NTI2 1148 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 THEGQ9P2T0 379 aa18.41■□□□□ 0.54
HLA-DQB1-208ENST00000484729 CYP2D7A0A087X1C5 515 aa18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 VWA5AO00534 786 aa18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 RAD21O60216 631 aa18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 SMARCA5O60264 1052 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 CHGBP05060 677 aa18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 EEF2P13639 858 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 PPIGQ13427 754 aaKnown RBP eCLIP18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 CCSAPQ6IQ19 270 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 DDRGK1Q96HY6 314 aa18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ZHX1Q9UKY1 873 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ZNF214Q9UL59 606 aaPredicted RBP18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 FAM184BQ9ULE4 1060 aa18.4■□□□□ 0.54
HLA-DQB1-208ENST00000484729 MOXD2PA6NHM9 499 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 SNAI1O95863 264 aaPredicted RBP18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 IGFBP4P22692 258 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 AKNAD1Q5T1N1 836 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 RASIP1Q5U651 963 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 ZNF365Q70YC5 407 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 REPS2Q8NFH8 660 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 VTI1AQ96AJ9 217 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 UHRF1Q96T88 793 aaPredicted RBP18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 PPP1R12CQ9BZL4 782 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 PPP1R9AQ9ULJ8 1098 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 MYO9BQ13459 2157 aa18.39■□□□□ 0.53
HLA-DQB1-208ENST00000484729 CDK8P49336 464 aa18.38■□□□□ 0.53
HLA-DQB1-208ENST00000484729 CDK7P50613 346 aa18.38■□□□□ 0.53
HLA-DQB1-208ENST00000484729 MRPS5P82675 430 aaKnown RBP18.38■□□□□ 0.53
HLA-DQB1-208ENST00000484729 UBE3CQ15386 1083 aa18.38■□□□□ 0.53
HLA-DQB1-208ENST00000484729 FAM83BQ5T0W9 1011 aa18.38■□□□□ 0.53
HLA-DQB1-208ENST00000484729 ZSCAN25Q6NSZ9 544 aa18.38■□□□□ 0.53
HLA-DQB1-208ENST00000484729 SLC4A4Q9Y6R1 1079 aa18.38■□□□□ 0.53
HLA-DQB1-208ENST00000484729 NCOR1O75376 2440 aa18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 USP17L12C9JPN9 530 aa18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 USP17L21D6R901 530 aa18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 ADCY6O43306 1168 aa18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 ASGR1P07306 291 aa18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 C6orf222P0C671 652 aaPredicted RBP18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 SLC4A3P48751 1232 aa18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 C12orf60Q5U649 245 aa18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 GLT1D1Q96MS3 346 aa18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 MYH8P13535 1937 aa18.37■□□□□ 0.53
HLA-DQB1-208ENST00000484729 DUSP11O75319 330 aaKnown RBP18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 ELP1O95163 1332 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 CYP2C18P33260 490 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 PLA2G5P39877 138 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 CCDC174Q6PII3 467 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 TMEM199Q8N511 208 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 DDX11Q96FC9 970 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 CCDC17Q96LX7 622 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 NECAB3Q96P71 396 aaPredicted RBP18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 NUP88Q99567 741 aaPredicted RBP18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 NKX2-4Q9H2Z4 354 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 ECHDC1Q9NTX5 307 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 CXXC1Q9P0U4 656 aaPredicted RBP18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 CHD7Q9P2D1 2997 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 RIPK3Q9Y572 518 aa18.36■□□□□ 0.53
HLA-DQB1-208ENST00000484729 MROH7Q68CQ1 1323 aa18.35■□□□□ 0.53
HLA-DQB1-208ENST00000484729 SYNGAP1Q96PV0 1343 aa18.35■□□□□ 0.53
HLA-DQB1-208ENST00000484729 SNRNP48Q6IEG0 339 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-208ENST00000484729 C16orf86Q6ZW13 317 aa18.35■□□□□ 0.53
HLA-DQB1-208ENST00000484729 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
HLA-DQB1-208ENST00000484729 PUS7LQ9H0K6 701 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-208ENST00000484729 GOPCQ9HD26 462 aa18.35■□□□□ 0.53
HLA-DQB1-208ENST00000484729 MSRAQ9UJ68 235 aa18.35■□□□□ 0.53
HLA-DQB1-208ENST00000484729 BAZ2AQ9UIF9 1905 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-208ENST00000484729 REV3LO60673 3130 aa18.34■□□□□ 0.53
HLA-DQB1-208ENST00000484729 DNAJC25-GNG10A0A024R161 153 aa18.34■□□□□ 0.53
HLA-DQB1-208ENST00000484729 A0A0U1RQG5 324 aaPredicted RBP18.34■□□□□ 0.53
HLA-DQB1-208ENST00000484729 ARVCFO00192 962 aa18.34■□□□□ 0.53
HLA-DQB1-208ENST00000484729 CST5P28325 142 aaPredicted RBP18.34■□□□□ 0.53
HLA-DQB1-208ENST00000484729 COPB2P35606 906 aa18.34■□□□□ 0.53
HLA-DQB1-208ENST00000484729 ACVR2BQ13705 512 aa18.34■□□□□ 0.53
HLA-DQB1-208ENST00000484729 PSRC1Q6PGN9 363 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms