RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 RING1Q06587 406 aa8.44□□□□□ -1.06
RIF1-210ENST00000484077 PSMD2Q13200 908 aa8.44□□□□□ -1.06
RIF1-210ENST00000484077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.44□□□□□ -1.06
RIF1-210ENST00000484077 ZBTB7CA1YPR0 619 aa8.43□□□□□ -1.06
RIF1-210ENST00000484077 DYNC1LI2O43237 492 aaPredicted RBP8.43□□□□□ -1.06
RIF1-210ENST00000484077 GCP02774 474 aa8.43□□□□□ -1.06
RIF1-210ENST00000484077 HCLS1P14317 486 aaPredicted RBP8.43□□□□□ -1.06
RIF1-210ENST00000484077 HOXA10P31260 410 aaPredicted RBP8.43□□□□□ -1.06
RIF1-210ENST00000484077 CCDC85BQ15834 202 aaPredicted RBP8.43□□□□□ -1.06
RIF1-210ENST00000484077 VPS72Q15906 364 aa8.43□□□□□ -1.06
RIF1-210ENST00000484077 TTBK2Q6IQ55 1244 aa8.43□□□□□ -1.06
RIF1-210ENST00000484077 ZNF765Q7L2R6 523 aa8.43□□□□□ -1.06
RIF1-210ENST00000484077 NME9Q86XW9 330 aa8.43□□□□□ -1.06
RIF1-210ENST00000484077 SHISA5Q8N114 240 aa8.43□□□□□ -1.06
RIF1-210ENST00000484077 ISL2Q96A47 359 aa8.43□□□□□ -1.06
RIF1-210ENST00000484077 NOC4LQ9BVI4 516 aaKnown RBP8.43□□□□□ -1.06
RIF1-210ENST00000484077 BSDC1Q9NW68 430 aaPredicted RBP8.43□□□□□ -1.06
RIF1-210ENST00000484077 RGPD2P0DJD1 1756 aa8.43□□□□□ -1.06
RIF1-210ENST00000484077 EP400Q96L91 3159 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 NEFMP07197 916 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 VSIG10LQ86VR7 867 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 KCNH5Q8NCM2 988 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 PSMG3-AS1Q96PY0 264 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 MKNK2Q9HBH9 465 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 SSU72Q9NP77 194 aaKnown RBP8.42□□□□□ -1.06
RIF1-210ENST00000484077 PCDHA4Q9UN74 947 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 SNCAIPQ9Y6H5 919 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 AATKQ6ZMQ8 1374 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 CRB1P82279 1406 aa8.42□□□□□ -1.06
RIF1-210ENST00000484077 BLMP54132 1417 aaPredicted RBP8.41□□□□□ -1.06
RIF1-210ENST00000484077 GP2P55259 537 aaKnown RBP8.41□□□□□ -1.06
RIF1-210ENST00000484077 TAF1CQ15572 869 aaPredicted RBP8.41□□□□□ -1.06
RIF1-210ENST00000484077 RASIP1Q5U651 963 aa8.41□□□□□ -1.06
RIF1-210ENST00000484077 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.41□□□□□ -1.06
RIF1-210ENST00000484077 POLR3GLQ9BT43 218 aa8.41□□□□□ -1.06
RIF1-210ENST00000484077 TACC3Q9Y6A5 838 aa8.41□□□□□ -1.06
RIF1-210ENST00000484077 RTL1A6NKG5 1358 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 SPATA31A5Q5VU36 1347 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 SPATA31A7Q8IWB4 1347 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 LMNB1P20700 586 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 ZBTB37Q5TC79 503 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
RIF1-210ENST00000484077 MPRIPQ6WCQ1 1025 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 AGMOQ6ZNB7 445 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 HDXQ7Z353 690 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 GAL3ST3Q96A11 431 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 ELMO3Q96BJ8 720 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 CRELD1Q96HD1 420 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 FBXL18Q96ME1 805 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 PICK1Q9NRD5 415 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 USP35Q9P2H5 1018 aa8.4□□□□□ -1.06
RIF1-210ENST00000484077 ANGEL1Q9UNK9 670 aaKnown RBP8.4□□□□□ -1.06
RIF1-210ENST00000484077 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.07
RIF1-210ENST00000484077 SHANK3Q9BYB0 1731 aa8.4□□□□□ -1.07
RIF1-210ENST00000484077 SPATA31A1Q5TZJ5 1347 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 SORBS3O60504 671 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 FAM87AP0C7U9 286 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 NTF4P34130 210 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 LIG3P49916 1009 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 CDK5R2Q13319 367 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 PPM1JQ5JR12 505 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 ARHGEF25Q86VW2 580 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 ZNF507Q8TCN5 953 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 MISP3Q96FF7 219 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 COG3Q96JB2 828 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 DUSP23Q9BVJ7 150 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 CCDC39Q9UFE4 941 aa8.39□□□□□ -1.07
RIF1-210ENST00000484077 KIF7Q2M1P5 1343 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 WDR17Q8IZU2 1322 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 DCDC2CA8MYV0 355 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 EVA1CP58658 441 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 CDC37L1Q7L3B6 337 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 CYFIP1Q7L576 1253 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 STK11IPQ8N1F8 1099 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 BCL11AQ9H165 835 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 LGR6Q9HBX8 967 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 RNF19AQ9NV58 838 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 ZC3H7BQ9UGR2 993 aaKnown RBP8.38□□□□□ -1.07
RIF1-210ENST00000484077 SBF2Q86WG5 1849 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 RGPD3A6NKT7 1758 aaPredicted RBP8.38□□□□□ -1.07
RIF1-210ENST00000484077 RGPD4Q7Z3J3 1758 aa8.38□□□□□ -1.07
RIF1-210ENST00000484077 DISP2A7MBM2 1401 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 TNS2Q63HR2 1409 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 SMG6Q86US8 1419 aaKnown RBP8.37□□□□□ -1.07
RIF1-210ENST00000484077 NSD2O96028 1365 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 CAP2P40123 477 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 KRT27Q7Z3Y8 459 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 C12orf40Q86WS4 652 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 LRRC4CQ9HCJ2 640 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 MRS2Q9HD23 443 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 PKD1L3Q7Z443 1732 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 DOT1LQ8TEK3 1739 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 NHSQ6T4R5 1651 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 RREB1Q92766 1687 aa8.37□□□□□ -1.07
RIF1-210ENST00000484077 CCDC7Q96M83 1385 aa8.36□□□□□ -1.07
RIF1-210ENST00000484077 CGNL1Q0VF96 1302 aa8.36□□□□□ -1.07
RIF1-210ENST00000484077 ADAMTS4O75173 837 aa8.36□□□□□ -1.07
RIF1-210ENST00000484077 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
RIF1-210ENST00000484077 LRFN4Q6PJG9 635 aa8.36□□□□□ -1.07
RIF1-210ENST00000484077 CCDC84Q86UT8 332 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms