RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 SNAP25P60880 206 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 NTRK3Q16288 839 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 PIBF1Q8WXW3 757 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 P2RX7Q99572 595 aaKnown RBP16.43■□□□□ 0.22
SRSF6-202ENST00000483871 RBM28Q9NW13 759 aaKnown RBP16.43■□□□□ 0.22
SRSF6-202ENST00000483871 FEM1BQ9UK73 627 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 hCG_1642624A0A1W2PR95 340 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 K7ELQ4 463 aaPredicted RBP16.43■□□□□ 0.22
SRSF6-202ENST00000483871 CYP2C8P10632 490 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 TM4SF4P48230 202 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 INHBEP58166 350 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 COG2Q14746 738 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 TMTC3Q6ZXV5 915 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 ANKRD23Q86SG2 305 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 ADGRF4Q8IZF3 695 aa16.43■□□□□ 0.22
SRSF6-202ENST00000483871 ASCC2Q9H1I8 757 aaPredicted RBP16.43■□□□□ 0.22
SRSF6-202ENST00000483871 SH2B1Q9NRF2 756 aaPredicted RBP16.43■□□□□ 0.22
SRSF6-202ENST00000483871 NID2Q14112 1375 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 CCDC196A0A1B0GTZ2 297 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 PEX10O60683 326 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 CTDNEP1O95476 244 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 FUT2Q10981 343 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 PPP2R5BQ15173 497 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 SYDE2Q5VT97 1194 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 POTEEQ6S8J3 1075 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 BTNL9Q6UXG8 535 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 IFNL1Q8IU54 200 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 HSCBQ8IWL3 235 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 CHURC1Q8WUH1 139 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 PHKBQ93100 1093 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 ATG4CQ96DT6 458 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 PRR12Q9ULL5 1215 aa16.42■□□□□ 0.22
SRSF6-202ENST00000483871 CPLX1O14810 134 aa16.41■□□□□ 0.22
SRSF6-202ENST00000483871 DHX16O60231 1041 aaKnown RBP16.41■□□□□ 0.22
SRSF6-202ENST00000483871 PLA2G6O60733 806 aa16.41■□□□□ 0.22
SRSF6-202ENST00000483871 DSG3P32926 999 aa16.41■□□□□ 0.22
SRSF6-202ENST00000483871 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
SRSF6-202ENST00000483871 SREBF2Q12772 1141 aa16.41■□□□□ 0.22
SRSF6-202ENST00000483871 PRPF38AQ8NAV1 312 aaKnown RBP16.41■□□□□ 0.22
SRSF6-202ENST00000483871 SLF1Q9BQI6 1058 aa16.41■□□□□ 0.22
SRSF6-202ENST00000483871 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
SRSF6-202ENST00000483871 JMJD4Q9H9V9 463 aa16.41■□□□□ 0.22
SRSF6-202ENST00000483871 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
SRSF6-202ENST00000483871 RLFQ13129 1914 aa16.41■□□□□ 0.22
SRSF6-202ENST00000483871 SPDYE16A6NNV3 312 aaPredicted RBP16.4■□□□□ 0.22
SRSF6-202ENST00000483871 GNAQP50148 359 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 FAM160B2Q86V87 743 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 JAK2O60674 1132 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 IFNAR1P17181 557 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 OSBPP22059 807 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 MAP2K2P36507 400 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 SLC4A3P48751 1232 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 HERVK_113P62684 666 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 PABPC4Q13310 644 aaKnown RBP eCLIP16.4■□□□□ 0.224e-8■□□□□ 8.4
SRSF6-202ENST00000483871 HOMER1Q86YM7 354 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 PIGSQ96S52 555 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
SRSF6-202ENST00000483871 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
SRSF6-202ENST00000483871 CNTNAP5Q8WYK1 1306 aa16.39■□□□□ 0.21
SRSF6-202ENST00000483871 PARP14Q460N5 1801 aa16.39■□□□□ 0.21
SRSF6-202ENST00000483871 VWA5AO00534 786 aa16.39■□□□□ 0.21
SRSF6-202ENST00000483871 SPRYD3Q8NCJ5 442 aa16.39■□□□□ 0.21
SRSF6-202ENST00000483871 NSUN7Q8NE18 718 aaKnown RBP16.39■□□□□ 0.21
SRSF6-202ENST00000483871 LZTS2Q9BRK4 669 aa16.39■□□□□ 0.21
SRSF6-202ENST00000483871 SPZ1Q9BXG8 430 aa16.39■□□□□ 0.21
SRSF6-202ENST00000483871 SLC26A6Q9BXS9 759 aa16.39■□□□□ 0.21
SRSF6-202ENST00000483871 SLC45A1Q9Y2W3 748 aa16.39■□□□□ 0.21
SRSF6-202ENST00000483871 TAL1P17542 331 aaPredicted RBP16.38■□□□□ 0.21
SRSF6-202ENST00000483871 SMARCA1P28370 1054 aa16.38■□□□□ 0.21
SRSF6-202ENST00000483871 CUL4AQ13619 759 aa16.38■□□□□ 0.21
SRSF6-202ENST00000483871 TAF1CQ15572 869 aaPredicted RBP16.38■□□□□ 0.21
SRSF6-202ENST00000483871 CCDC174Q6PII3 467 aa16.38■□□□□ 0.21
SRSF6-202ENST00000483871 DDX11Q96FC9 970 aa16.38■□□□□ 0.21
SRSF6-202ENST00000483871 ADAMTS5Q9UNA0 930 aa16.38■□□□□ 0.21
SRSF6-202ENST00000483871 SMCHD1A6NHR9 2005 aa16.38■□□□□ 0.21
SRSF6-202ENST00000483871 FDPSP14324 419 aaKnown RBP16.37■□□□□ 0.21
SRSF6-202ENST00000483871 CDC37Q16543 378 aaPredicted RBP16.37■□□□□ 0.21
SRSF6-202ENST00000483871 OTUD7BQ6GQQ9 843 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 CPLX2Q6PUV4 134 aaKnown RBP16.37■□□□□ 0.21
SRSF6-202ENST00000483871 CPXCR1Q8N123 301 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 DNAJC5GQ8N7S2 189 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 SMCR8Q8TEV9 937 aaPredicted RBP16.37■□□□□ 0.21
SRSF6-202ENST00000483871 MTMR8Q96EF0 704 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 PAGR1Q9BTK6 254 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 RANBP17Q9H2T7 1088 aaKnown RBP16.37■□□□□ 0.21
SRSF6-202ENST00000483871 SLC38A10Q9HBR0 1119 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 TXNRD2Q9NNW7 524 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 BTBD7Q9P203 1132 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 RBPJLQ9UBG7 517 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 PPP1R11O60927 126 aaPredicted RBP16.37■□□□□ 0.21
SRSF6-202ENST00000483871 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
SRSF6-202ENST00000483871 SSRP1Q08945 709 aaKnown RBP16.37■□□□□ 0.21
SRSF6-202ENST00000483871 TMEM132BQ14DG7 1078 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 PKN1Q16512 942 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 QRICH1Q2TAL8 776 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 Q3C1V9 767 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms