RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PDE6AP16499 860 aa13.17□□□□□ -0.3
SMARCC1-205ENST00000483847 STAT3P40763 770 aa13.17□□□□□ -0.3
SMARCC1-205ENST00000483847 REPS2Q8NFH8 660 aa13.17□□□□□ -0.3
SMARCC1-205ENST00000483847 NKX2-4Q9H2Z4 354 aa13.17□□□□□ -0.3
SMARCC1-205ENST00000483847 CXXC1Q9P0U4 656 aaPredicted RBP13.17□□□□□ -0.3
SMARCC1-205ENST00000483847 ZNF532Q9HCE3 1301 aa13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 BAZ2AQ9UIF9 1905 aaKnown RBP13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 PRKAB2O43741 272 aa13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 CYP2C18P33260 490 aa13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 SLC9C2Q5TAH2 1124 aa13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 TMED8Q6PL24 325 aaPredicted RBP13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 GLT1D1Q96MS3 346 aa13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 ARMT1Q9H993 441 aa13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 ZHX1Q9UKY1 873 aaPredicted RBP13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 YBX2Q9Y2T7 364 aaKnown RBP13.16□□□□□ -0.3
SMARCC1-205ENST00000483847 ELP1O95163 1332 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 TCRBV5S4A2TA0A5A2 114 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 DUSP11O75319 330 aaKnown RBP13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 ASGR1P07306 291 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 C6orf222P0C671 652 aaPredicted RBP13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 TFF2Q03403 129 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 SLFNL1Q499Z3 407 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 FAM83BQ5T0W9 1011 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 PSRC1Q6PGN9 363 aaPredicted RBP13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 CCDC174Q6PII3 467 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 AACSQ86V21 672 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 TMEM199Q8N511 208 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 PPP1R9AQ9ULJ8 1098 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
SMARCC1-205ENST00000483847 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 SYNGAP1Q96PV0 1343 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 MCM3APO60318 1980 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 DNAJC25-GNG10A0A024R161 153 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 ARVCFO00192 962 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 APBB1O00213 710 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 BMP1P13497 986 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 CST5P28325 142 aaPredicted RBP13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 CDK8P49336 464 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 RAB30Q15771 203 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 VTI1AQ96AJ9 217 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 NUP88Q99567 741 aaPredicted RBP13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 IL23AQ9NPF7 189 aa13.14□□□□□ -0.31
SMARCC1-205ENST00000483847 A0A0U1RQG5 324 aaPredicted RBP13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 CTAGE5O15320 804 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 RAD21O60216 631 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 HOXD11P31277 338 aaPredicted RBP13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 KCNQ1P51787 676 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 RABGGTBP53611 331 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 ACVR2BQ13705 512 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 CCDC144BQ3MJ40 725 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 SNRNP48Q6IEG0 339 aaKnown RBP13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 MICALL1Q8N3F8 863 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 CCDC17Q96LX7 622 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 FGD4Q96M96 766 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 UPF3AQ9H1J1 476 aaKnown RBP13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 SLC28A3Q9HAS3 691 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 EXOC6BQ9Y2D4 811 aa13.13□□□□□ -0.31
SMARCC1-205ENST00000483847 GOLIM4O00461 696 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 CD4P01730 458 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 MYOGP15173 224 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 COPB2P35606 906 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 SLC4A3P48751 1232 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 GJA9P57773 515 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 TTF1Q15361 905 aaPredicted RBP13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 GNASQ5JWF2 1037 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 C12orf60Q5U649 245 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 OTOP2Q7RTS6 562 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 TEX13BQ9BXU2 312 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 KANSL2Q9H9L4 492 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 IL1RAPL2Q9NP60 686 aa13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
SMARCC1-205ENST00000483847 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 USP17L21D6R901 530 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 MBD4O95243 580 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 FGBP02675 491 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 CHGBP05060 677 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 BEX3Q00994 111 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 ZKSCAN2Q63HK3 967 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 C16orf86Q6ZW13 317 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 C1QTNF1Q9BXJ1 281 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
SMARCC1-205ENST00000483847 GREB1LQ9C091 1923 aaPredicted RBP13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 TLR3O15455 904 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms