RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 LIN37Q96GY3 246 aaPredicted RBP5.34□□□□□ -1.55
LRCH3-217ENST00000483442 HSPA12BQ96MM6 686 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 CEP44Q9C0F1 390 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 ATP13A1Q9HD20 1204 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 PICK1Q9NRD5 415 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 RNF19AQ9NV58 838 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 PPM1HQ9ULR3 514 aa5.34□□□□□ -1.55
LRCH3-217ENST00000483442 SPHKAPQ2M3C7 1700 aa5.34□□□□□ -1.56
LRCH3-217ENST00000483442 MARF1Q9Y4F3 1742 aaKnown RBP5.34□□□□□ -1.56
LRCH3-217ENST00000483442 NAIPQ13075 1403 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 VPS8Q8N3P4 1428 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 PRAMEF27A3QJZ7 478 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 BRD1O95696 1058 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 SAFB2Q14151 953 aaKnown RBP eCLIP5.33□□□□□ -1.56
LRCH3-217ENST00000483442 CHRNA2Q15822 529 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 GPR162Q16538 588 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 CDC37L1Q7L3B6 337 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 ZSWIM9Q86XI8 627 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 ANKRD24Q8TF21 1146 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 ELMO3Q96BJ8 720 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 PRDM11Q9NQV5 511 aa5.33□□□□□ -1.56
LRCH3-217ENST00000483442 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.33□□□□□ -1.56
LRCH3-217ENST00000483442 CCDC144AA2RUR9 1427 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 PARD3Q8TEW0 1356 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 PLEKHH1Q9ULM0 1364 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 SPATA31A1Q5TZJ5 1347 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 E9PCH4 1651 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 CROCC2H7BZ55 1655 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 LRRC10BA6NIK2 292 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 LRIG2O94898 1065 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 USP17L7P0C7H9 530 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 MLANAQ16655 118 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 RGL3Q3MIN7 710 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 CDKAL1Q5VV42 579 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 FBF1Q8TES7 1133 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 SRCIN1Q9C0H9 1055 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 C12orf49Q9H741 205 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 CARS2Q9HA77 564 aaKnown RBP5.32□□□□□ -1.56
LRCH3-217ENST00000483442 KCNK12Q9HB15 430 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 PRDM5Q9NQX1 630 aaPredicted RBP5.32□□□□□ -1.56
LRCH3-217ENST00000483442 CYP8B1Q9UNU6 501 aa5.32□□□□□ -1.56
LRCH3-217ENST00000483442 TNS3Q68CZ2 1445 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 SBNO1A3KN83 1393 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 ARHGEF10O15013 1369 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 CAMTA1Q9Y6Y1 1673 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 USP32Q8NFA0 1604 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 RPGRIP1LQ68CZ1 1315 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 GNAT3A8MTJ3 354 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 P4HBP07237 508 aaKnown RBP5.31□□□□□ -1.56
LRCH3-217ENST00000483442 CLCN7P51798 805 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 ZC3H6P61129 1189 aaKnown RBP5.31□□□□□ -1.56
LRCH3-217ENST00000483442 FGD1P98174 961 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 LRRC14Q15048 493 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 KCNMB1Q16558 191 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 PRR23BQ6ZRT6 265 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 KSR1Q8IVT5 923 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 ZNF507Q8TCN5 953 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 ASB16Q96NS5 453 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 MIPEPQ99797 713 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 FOXQ1Q9C009 403 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 WNT10AQ9GZT5 417 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 MAPK8IP1Q9UQF2 711 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 SAMM50Q9Y512 469 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 PCDHB5Q9Y5E4 795 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 ST14Q9Y5Y6 855 aa5.31□□□□□ -1.56
LRCH3-217ENST00000483442 ADGRF5Q8IZF2 1346 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 WASH4PA8MWX3 477 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 H3BS24 57 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 PLSCR1O15162 318 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 ZNF865P0CJ78 1059 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-217ENST00000483442 PDE4CQ08493 712 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 FBLN7Q53RD9 439 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 ALG1LQ6GMV1 187 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 PTF1AQ7RTS3 328 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 XAGE3Q8WTP9 111 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 CAPN6Q9Y6Q1 641 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 IVNS1ABPQ9Y6Y0 642 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 RGPD1P0DJD0 1748 aa5.3□□□□□ -1.56
LRCH3-217ENST00000483442 KRT1P04264 644 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 SEPT6Q14141 434 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 WIPI1Q5MNZ9 446 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-217ENST00000483442 SCARA3Q6AZY7 606 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 C22orf34Q6ZV56 151 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 TCP11L2Q8N4U5 519 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 KCT2Q8NC54 265 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 NGDNQ8NEJ9 315 aaKnown RBP5.29□□□□□ -1.56
LRCH3-217ENST00000483442 FAM84AQ96KN4 292 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 STK32BQ9NY57 414 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 LMCD1Q9NZU5 365 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 FAM8A1Q9UBU6 413 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 TPX2Q9ULW0 747 aaKnown RBP5.29□□□□□ -1.56
LRCH3-217ENST00000483442 CEP350Q5VT06 3117 aa5.29□□□□□ -1.56
LRCH3-217ENST00000483442 NEXMIFQ5QGS0 1516 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 GFRA2O00451 464 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 GIPC1O14908 333 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 CBX7O95931 251 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 GRK4P32298 578 aa5.28□□□□□ -1.56
LRCH3-217ENST00000483442 CAP2P40123 477 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms