RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 COL11A1P12107 1806 aaPredicted RBP27.79■■■□□ 2.04
RHBDF1-208ENST00000482904 FGRP09769 529 aa27.79■■■□□ 2.04
RHBDF1-208ENST00000482904 CYP2C19P33261 490 aa27.79■■■□□ 2.04
RHBDF1-208ENST00000482904 SLC4A3P48751 1232 aa27.79■■■□□ 2.04
RHBDF1-208ENST00000482904 AKNAD1Q5T1N1 836 aa27.79■■■□□ 2.04
RHBDF1-208ENST00000482904 ANKLE1Q8NAG6 615 aa27.79■■■□□ 2.04
RHBDF1-208ENST00000482904 GMCL1Q96IK5 515 aa27.79■■■□□ 2.04
RHBDF1-208ENST00000482904 TMEM232C9JQI7 657 aa27.78■■■□□ 2.04
RHBDF1-208ENST00000482904 COBLO75128 1261 aa27.78■■■□□ 2.04
RHBDF1-208ENST00000482904 PCP11498 1178 aaKnown RBP27.78■■■□□ 2.04
RHBDF1-208ENST00000482904 CNGA1P29973 690 aa27.78■■■□□ 2.04
RHBDF1-208ENST00000482904 STAT2P52630 851 aa27.78■■■□□ 2.04
RHBDF1-208ENST00000482904 OLFML2BQ68BL8 750 aa27.78■■■□□ 2.04
RHBDF1-208ENST00000482904 TBC1D10CQ8IV04 446 aa27.78■■■□□ 2.04
RHBDF1-208ENST00000482904 CPXCR1Q8N123 301 aa27.78■■■□□ 2.04
RHBDF1-208ENST00000482904 PAWRQ96IZ0 340 aaKnown RBP27.78■■■□□ 2.04
RHBDF1-208ENST00000482904 ZNF213O14771 459 aa27.77■■■□□ 2.04
RHBDF1-208ENST00000482904 MCCP23508 829 aa27.77■■■□□ 2.04
RHBDF1-208ENST00000482904 NECAB2Q7Z6G3 386 aa27.77■■■□□ 2.04
RHBDF1-208ENST00000482904 DIS3LQ8TF46 1054 aaKnown RBP27.77■■■□□ 2.04
RHBDF1-208ENST00000482904 STAG1Q8WVM7 1258 aa27.77■■■□□ 2.04
RHBDF1-208ENST00000482904 CCDC96Q2M329 555 aa27.76■■■□□ 2.03
RHBDF1-208ENST00000482904 FAM160B2Q86V87 743 aa27.76■■■□□ 2.03
RHBDF1-208ENST00000482904 NBPF3Q9H094 633 aa27.76■■■□□ 2.03
RHBDF1-208ENST00000482904 SLC38A10Q9HBR0 1119 aa27.76■■■□□ 2.03
RHBDF1-208ENST00000482904 RAVER2Q9HCJ3 691 aaKnown RBP27.76■■■□□ 2.03
RHBDF1-208ENST00000482904 OGDHLQ9ULD0 1010 aa27.76■■■□□ 2.03
RHBDF1-208ENST00000482904 NEDD4P46934 1319 aa27.75■■■□□ 2.03
RHBDF1-208ENST00000482904 PGK2P07205 417 aa27.75■■■□□ 2.03
RHBDF1-208ENST00000482904 KCTD1Q719H9 257 aa27.75■■■□□ 2.03
RHBDF1-208ENST00000482904 CHURC1Q8WUH1 139 aa27.75■■■□□ 2.03
RHBDF1-208ENST00000482904 DSCC1Q9BVC3 393 aa27.75■■■□□ 2.03
RHBDF1-208ENST00000482904 ATP2A1O14983 1001 aa27.74■■■□□ 2.03
RHBDF1-208ENST00000482904 IMMTQ16891 758 aaKnown RBP27.74■■■□□ 2.03
RHBDF1-208ENST00000482904 ESR2Q92731 530 aa27.74■■■□□ 2.03
RHBDF1-208ENST00000482904 MAML3Q96JK9 1138 aa27.74■■■□□ 2.03
RHBDF1-208ENST00000482904 RAD50Q92878 1312 aa27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 MSCO60682 206 aa27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 FDX1P10109 184 aa27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 TOP1P11387 765 aaKnown RBP27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 CYBAP13498 195 aa27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 RASGRP2Q7LDG7 609 aa27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 C11orf49Q9H6J7 331 aa27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 TCP11L1Q9NUJ3 509 aa27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 DDX20Q9UHI6 824 aaKnown RBP27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 CTNNA3Q9UI47 895 aa27.73■■■□□ 2.03
RHBDF1-208ENST00000482904 LAMA4Q16363 1823 aa27.72■■■□□ 2.03
RHBDF1-208ENST00000482904 OAZ1P54368 228 aa27.72■■■□□ 2.03
RHBDF1-208ENST00000482904 DCAF4Q8WV16 495 aa27.72■■■□□ 2.03
RHBDF1-208ENST00000482904 RUFY2Q8WXA3 655 aa27.72■■■□□ 2.03
RHBDF1-208ENST00000482904 RIPK3Q9Y572 518 aa27.72■■■□□ 2.03
RHBDF1-208ENST00000482904 H0YGN5 161 aa27.71■■■□□ 2.03
RHBDF1-208ENST00000482904 NOVP48745 357 aa27.71■■■□□ 2.03
RHBDF1-208ENST00000482904 LHX8Q68G74 356 aa27.71■■■□□ 2.03
RHBDF1-208ENST00000482904 RCSD1Q6JBY9 416 aa27.71■■■□□ 2.03
RHBDF1-208ENST00000482904 DDX11Q96FC9 970 aa27.71■■■□□ 2.03
RHBDF1-208ENST00000482904 TMEM47Q9BQJ4 181 aa27.71■■■□□ 2.03
RHBDF1-208ENST00000482904 HOMER2Q9NSB8 354 aa27.71■■■□□ 2.03
RHBDF1-208ENST00000482904 FBXO40Q9UH90 709 aa27.71■■■□□ 2.03
RHBDF1-208ENST00000482904 NR2E3Q9Y5X4 410 aa27.71■■■□□ 2.03
RHBDF1-208ENST00000482904 EVI5O60447 810 aa27.7■■■□□ 2.02
RHBDF1-208ENST00000482904 TRPV1Q8NER1 839 aa27.7■■■□□ 2.02
RHBDF1-208ENST00000482904 IL25Q9H293 177 aa27.7■■■□□ 2.02
RHBDF1-208ENST00000482904 IGHA2P01877 340 aa27.69■■■□□ 2.02
RHBDF1-208ENST00000482904 ANKRD35Q8N283 1001 aa27.69■■■□□ 2.02
RHBDF1-208ENST00000482904 DIS3Q9Y2L1 958 aaKnown RBP27.69■■■□□ 2.02
RHBDF1-208ENST00000482904 PLA2G6O60733 806 aa27.68■■■□□ 2.02
RHBDF1-208ENST00000482904 NT5C2P49902 561 aa27.68■■■□□ 2.02
RHBDF1-208ENST00000482904 ZNF792Q3KQV3 632 aa27.68■■■□□ 2.02
RHBDF1-208ENST00000482904 CCDC174Q6PII3 467 aa27.68■■■□□ 2.02
RHBDF1-208ENST00000482904 IQCA1Q86XH1 822 aa27.68■■■□□ 2.02
RHBDF1-208ENST00000482904 CHST13Q8NET6 341 aa27.68■■■□□ 2.02
RHBDF1-208ENST00000482904 ZKSCAN3Q9BRR0 538 aa27.68■■■□□ 2.02
RHBDF1-208ENST00000482904 FRMPD2Q68DX3 1309 aaPredicted RBP27.67■■■□□ 2.02
RHBDF1-208ENST00000482904 KDM4AO75164 1064 aa27.67■■■□□ 2.02
RHBDF1-208ENST00000482904 CHMLP26374 656 aa27.67■■■□□ 2.02
RHBDF1-208ENST00000482904 MNX1P50219 401 aaPredicted RBP27.67■■■□□ 2.02
RHBDF1-208ENST00000482904 TTC14Q96N46 770 aa27.67■■■□□ 2.02
RHBDF1-208ENST00000482904 TINF2Q9BSI4 451 aa27.67■■■□□ 2.02
RHBDF1-208ENST00000482904 ACAD9Q9H845 621 aa27.67■■■□□ 2.02
RHBDF1-208ENST00000482904 PRR12Q9ULL5 1215 aa27.67■■■□□ 2.02
RHBDF1-208ENST00000482904 B4E1Z4 1266 aa27.66■■■□□ 2.02
RHBDF1-208ENST00000482904 SEPT4O43236 478 aa27.66■■■□□ 2.02
RHBDF1-208ENST00000482904 PRAMEF19Q5SWL8 479 aa27.66■■■□□ 2.02
RHBDF1-208ENST00000482904 RNF146Q9NTX7 359 aa27.66■■■□□ 2.02
RHBDF1-208ENST00000482904 SNAP25P60880 206 aa27.65■■■□□ 2.02
RHBDF1-208ENST00000482904 CCDC178Q5BJE1 867 aa27.65■■■□□ 2.02
RHBDF1-208ENST00000482904 ANO1Q5XXA6 986 aa27.65■■■□□ 2.02
RHBDF1-208ENST00000482904 AGBL1Q96MI9 1066 aa27.65■■■□□ 2.02
RHBDF1-208ENST00000482904 KRT23Q9C075 422 aa27.65■■■□□ 2.02
RHBDF1-208ENST00000482904 CNNM2Q9H8M5 875 aa27.65■■■□□ 2.02
RHBDF1-208ENST00000482904 GPCPD1Q9NPB8 672 aa27.65■■■□□ 2.02
RHBDF1-208ENST00000482904 NRBP1Q9UHY1 535 aa27.65■■■□□ 2.02
RHBDF1-208ENST00000482904 CNPY2Q9Y2B0 182 aa27.65■■■□□ 2.02
RHBDF1-208ENST00000482904 MYCNP04198 464 aaPredicted RBP27.64■■■□□ 2.02
RHBDF1-208ENST00000482904 PDHBP11177 359 aa27.64■■■□□ 2.02
RHBDF1-208ENST00000482904 ALAS1P13196 640 aa27.64■■■□□ 2.02
RHBDF1-208ENST00000482904 SLC16A2P36021 539 aa27.64■■■□□ 2.02
RHBDF1-208ENST00000482904 C7orf61Q8IZ16 206 aa27.64■■■□□ 2.02
RHBDF1-208ENST00000482904 FRMPD3Q5JV73 1810 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms