RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, human

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDGF-208	ENST00000482651	SOCS4	Q8WXH5	440 aa		10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	EVI5L	Q96CN4	794 aa		10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	SHISA4	Q96DD7	197 aa		10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	SEC62	Q99442	399 aa	Known RBP	10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	NACAP1	Q9BZK3	213 aa		10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	RNF208	Q9H0X6	261 aa		10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	PORCN	Q9H237	461 aa		10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	OSBPL3	Q9H4L5	887 aa		10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	VCPKMT	Q9H867	229 aa		10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	KANSL2	Q9H9L4	492 aa		10.42	□□□□□ -0.74
HDGF-208	ENST00000482651	MINDY4B	A8MYZ0	360 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	SPTLC1	O15269	473 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	GPR37L1	O60883	481 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	HMGCR	P04035	888 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	OAT	P04181	439 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	APP	P05067	770 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	RASA1	P20936	1047 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	TIE1	P35590	1138 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	GJA8	P48165	433 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	CCNA1	P78396	465 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	COG2	Q14746	738 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	KIAA1755	Q5JYT7	1200 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	TMEM92	Q6UXU6	159 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	GPR142	Q7Z601	462 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	PLEKHH3	Q7Z736	793 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	CCAR1	Q8IX12	1150 aa	Known RBP	10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	IFNL3	Q8IZI9	196 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	NUDT12	Q9BQG2	462 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	UNC93B1	Q9H1C4	597 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	MKNK2	Q9HBH9	465 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	ZNF287	Q9HBT7	754 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	HOXC10	Q9NYD6	342 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	BTBD7	Q9P203	1132 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	GNE	Q9Y223	722 aa	Known RBP	10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	ADGRG1	Q9Y653	693 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	BRCA2	P51587	3418 aa		10.41	□□□□□ -0.74
HDGF-208	ENST00000482651	RBBP6	Q7Z6E9	1792 aa	Known RBP	10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	TRIM6-TRIM34	B2RNG4	842 aa		10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	WDR46	O15213	610 aa	Known RBP	10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	XRCC5	P13010	732 aa	Known RBP	10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	EEF2	P13639	858 aa	Known RBP	10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	CAPN2	P17655	700 aa		10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	MORN1	Q5T089	497 aa		10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	PLEKHM2	Q8IWE5	1019 aa		10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	TRMT44	Q8IYL2	757 aa	Known RBP	10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	U2AF1L4	Q8WU68	220 aa	Known RBP	10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	USP6NL	Q92738	828 aa		10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	TANGO6	Q9C0B7	1094 aa		10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	NAPB	Q9H115	298 aa		10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	CWC22	Q9HCG8	908 aa	Known RBP	10.4	□□□□□ -0.74
HDGF-208	ENST00000482651	TNRC18	O15417	2968 aa	Predicted RBP	10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	HIP1	O00291	1037 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	SGPL1	O95470	568 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	CYP2B6	P20813	491 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	RGS2	P41220	211 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	ATP2B2	Q01814	1243 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	SPICE1	Q8N0Z3	855 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	STK11IP	Q8N1F8	1099 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	MB21D1	Q8N884	522 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	TRIB2	Q92519	343 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	APBA2	Q99767	749 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	PAK6	Q9NQU5	681 aa	Predicted RBP	10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	HELLS	Q9NRZ9	838 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	NYAP2	Q9P242	653 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	BOLA1	Q9Y3E2	137 aa		10.39	□□□□□ -0.75
HDGF-208	ENST00000482651	IGKV6D-41	A0A0C4DH26	115 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	SLC15A5	A6NIM6	579 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	FOXP2	O15409	715 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	LILRB3	O75022	631 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	PRDM1	O75626	825 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	FLOT1	O75955	427 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	ATG7	O95352	703 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	SLC3A2	P08195	630 aa	Known RBP	10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	CD44	P16070	742 aa	Known RBP	10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	ZKSCAN1	P17029	563 aa	Predicted RBP	10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	PTPRE	P23469	700 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	PDE4B	Q07343	736 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	PPARA	Q07869	468 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	MAP3K21	Q5TCX8	1036 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	WDR78	Q5VTH9	848 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	CASC1	Q6TDU7	716 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	PADI6	Q6TGC4	694 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	CCDC129	Q6ZRS4	1044 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	UBE2Q1	Q7Z7E8	422 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	RILPL2	Q969X0	211 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	ATG4C	Q96DT6	458 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	DEFB118	Q96PH6	123 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	UCN2	Q96RP3	112 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	EPAS1	Q99814	870 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	SPATC1L	Q9H0A9	340 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.38	□□□□□ -0.75	5e-8	■■■■□ 26.3
HDGF-208	ENST00000482651	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	PLIN4	Q96Q06	1357 aa		10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	MKI67	P46013	3256 aa	Known RBP	10.38	□□□□□ -0.75
HDGF-208	ENST00000482651	RPTOR	Q8N122	1335 aa		10.37	□□□□□ -0.75
HDGF-208	ENST00000482651	MYH7	P12883	1935 aa		10.37	□□□□□ -0.75
HDGF-208	ENST00000482651	MGAM	O43451	1857 aa		10.37	□□□□□ -0.75
HDGF-208	ENST00000482651	EIF5B	O60841	1220 aa	Known RBP	10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms