RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 PAGR1Q9BTK6 254 aa23.2■■□□□ 1.3
TRAPPC12-220ENST00000482645 HOXC10Q9NYD6 342 aa23.2■■□□□ 1.3
TRAPPC12-220ENST00000482645 CPA4Q9UI42 421 aa23.2■■□□□ 1.3
TRAPPC12-220ENST00000482645 PPP1R9AQ9ULJ8 1098 aa23.2■■□□□ 1.3
TRAPPC12-220ENST00000482645 PARP14Q460N5 1801 aa23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 KLRF2D3W0D1 207 aa23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 PEX10O60683 326 aa23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 KIF5BP33176 963 aa23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 METAP2P50579 478 aaKnown RBP eCLIP23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 STK3Q13188 491 aa23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 FAM160B2Q86V87 743 aa23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 PRPF38AQ8NAV1 312 aaKnown RBP23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 FANCBQ8NB91 859 aa23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 R3HDMLQ9H3Y0 253 aa23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 WBP1LQ9NX94 342 aa23.19■■□□□ 1.3
TRAPPC12-220ENST00000482645 MCM2P49736 904 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 SNAP25P60880 206 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 BECN1Q14457 450 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 RTN1Q16799 776 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 SYDE2Q5VT97 1194 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 ANKRD13CQ8N6S4 541 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 JMYQ8N9B5 988 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 ALDH8A1Q9H2A2 487 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 CTDP1Q9Y5B0 961 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 RLFQ13129 1914 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 PALM3A6NDB9 673 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 TLR2O60603 784 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 CCT2P78371 535 aaKnown RBP23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 CMTR1Q8N1G2 835 aaKnown RBP23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 MAP3K14Q99558 947 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 VAT1LQ9HCJ6 419 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 PRR12Q9ULL5 1215 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 TPCN1Q9ULQ1 816 aa23.18■■□□□ 1.3
TRAPPC12-220ENST00000482645 K7ELQ4 463 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC12-220ENST00000482645 PDIA3P30101 505 aaKnown RBP23.17■■□□□ 1.3
TRAPPC12-220ENST00000482645 CCDC82Q8N4S0 544 aa23.17■■□□□ 1.3
TRAPPC12-220ENST00000482645 SAGE1Q9NXZ1 904 aa23.17■■□□□ 1.3
TRAPPC12-220ENST00000482645 HPS5Q9UPZ3 1129 aa23.17■■□□□ 1.3
TRAPPC12-220ENST00000482645 VWA5AO00534 786 aa23.16■■□□□ 1.3
TRAPPC12-220ENST00000482645 ECM2O94769 699 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC12-220ENST00000482645 PLEKHA8P1O95397 391 aa23.16■■□□□ 1.3
TRAPPC12-220ENST00000482645 GCLCP48506 637 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC12-220ENST00000482645 PLS1Q14651 629 aa23.16■■□□□ 1.3
TRAPPC12-220ENST00000482645 PIBF1Q8WXW3 757 aa23.16■■□□□ 1.3
TRAPPC12-220ENST00000482645 LIMCH1Q9UPQ0 1083 aa23.16■■□□□ 1.3
TRAPPC12-220ENST00000482645 MYPNQ86TC9 1320 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 PLA2G6O60733 806 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 LARGE1O95461 756 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 CDC27P30260 824 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 SLC4A3P48751 1232 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 EVCP57679 992 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 CCDC174Q6PII3 467 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 POTEEQ6S8J3 1075 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 BTNL9Q6UXG8 535 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 ADGRF4Q8IZF3 695 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 GTF3C2Q8WUA4 911 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 ZNF274Q96GC6 653 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 NCOA5Q9HCD5 579 aaKnown RBP23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 TXNRD2Q9NNW7 524 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 RBM28Q9NW13 759 aaKnown RBP23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 COL11A1P12107 1806 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 ADGRA2Q96PE1 1338 aa23.15■■□□□ 1.3
TRAPPC12-220ENST00000482645 BAZ2BQ9UIF8 2168 aaKnown RBP23.14■■□□□ 1.3
TRAPPC12-220ENST00000482645 ZBED4O75132 1171 aa23.14■■□□□ 1.3
TRAPPC12-220ENST00000482645 NBPF11Q86T75 865 aa23.14■■□□□ 1.3
TRAPPC12-220ENST00000482645 CPXCR1Q8N123 301 aa23.14■■□□□ 1.3
TRAPPC12-220ENST00000482645 SLKQ9H2G2 1235 aaPredicted RBP23.14■■□□□ 1.3
TRAPPC12-220ENST00000482645 BTBD7Q9P203 1132 aa23.14■■□□□ 1.3
TRAPPC12-220ENST00000482645 RBPJLQ9UBG7 517 aa23.14■■□□□ 1.3
TRAPPC12-220ENST00000482645 ADD1P35611 737 aaKnown RBP23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 GNAQP50148 359 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 RCAN1P53805 252 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 LBX2Q6XYB7 198 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 TMTC3Q6ZXV5 915 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 HOMER1Q86YM7 354 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 MB21D1Q8N884 522 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 HSPA1AP0DMV8 641 aaKnown RBP23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 HSPA1BP0DMV9 641 aaKnown RBP23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 TMEM132BQ14DG7 1078 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 C17orf99Q6UX52 265 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 SRBD1Q8N5C6 995 aaKnown RBP23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 TMX3Q96JJ7 454 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 CFHR5Q9BXR6 569 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 SLC38A10Q9HBR0 1119 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 RAVER2Q9HCJ3 691 aaKnown RBP23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 ADAMTS5Q9UNA0 930 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 RABGAP1Q9Y3P9 1069 aa23.13■■□□□ 1.29
TRAPPC12-220ENST00000482645 A0A0G2JMZ2 1700 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 CCDC196A0A1B0GTZ2 297 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 CYTH3O43739 400 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 PPFIA3O75145 1194 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 CNMDO75829 334 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 ERVK-9P63128 1117 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 ERVK-24P63145 666 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 ME3Q16798 604 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 NECAB1Q8N987 351 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 GPRC5AQ8NFJ5 357 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 LZTS2Q9BRK4 669 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 JMJD4Q9H9V9 463 aa23.12■■□□□ 1.29
TRAPPC12-220ENST00000482645 FAM217BQ9NTX9 383 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms